RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 ARAP3Q8WWN8 1544 aa37.64■■■■□ 3.62
TUSC3-213ENST00000515859 CDC42BPBQ9Y5S2 1711 aa37.62■■■■□ 3.61
TUSC3-213ENST00000515859 ARHGAP5Q13017 1502 aa37.61■■■■□ 3.61
TUSC3-213ENST00000515859 GLI2P10070 1586 aa37.6■■■■□ 3.61
TUSC3-213ENST00000515859 ZNF777Q9ULD5 760 aaPredicted RBP37.6■■■■□ 3.61
TUSC3-213ENST00000515859 EFCAB2Q5VUJ9 269 aa37.59■■■■□ 3.61
TUSC3-213ENST00000515859 ZNF644Q9H582 1327 aaPredicted RBP37.58■■■■□ 3.61
TUSC3-213ENST00000515859 CAMSAP2Q08AD1 1489 aa37.57■■■■□ 3.61
TUSC3-213ENST00000515859 CD109Q6YHK3 1445 aa37.57■■■■□ 3.61
TUSC3-213ENST00000515859 DIP2BQ9P265 1576 aa37.53■■■■□ 3.6
TUSC3-213ENST00000515859 FAM69CQ0P6D2 419 aa37.52■■■■□ 3.6
TUSC3-213ENST00000515859 ITGAEP38570 1179 aa37.51■■■■□ 3.6
TUSC3-213ENST00000515859 PLEKHH2Q8IVE3 1493 aa37.49■■■■□ 3.59
TUSC3-213ENST00000515859 SAMD9LQ8IVG5 1584 aa37.47■■■■□ 3.59
TUSC3-213ENST00000515859 FANCAO15360 1455 aa37.47■■■■□ 3.59
TUSC3-213ENST00000515859 KIAA1107Q9UPP5 1409 aa37.46■■■■□ 3.59
TUSC3-213ENST00000515859 MAP3K4Q9Y6R4 1608 aa37.45■■■■□ 3.59
TUSC3-213ENST00000515859 RSPH4AQ5TD94 716 aa37.43■■■■□ 3.58
TUSC3-213ENST00000515859 DNMT1P26358 1616 aaKnown RBP37.41■■■■□ 3.58
TUSC3-213ENST00000515859 DAPK1P53355 1430 aa37.4■■■■□ 3.58
TUSC3-213ENST00000515859 ABCC5O15440 1437 aa37.39■■■■□ 3.58
TUSC3-213ENST00000515859 MBD5Q9P267 1494 aa37.38■■■■□ 3.57
TUSC3-213ENST00000515859 HNRNPMP52272 730 aaKnown RBP eCLIP37.37■■■■□ 3.572e-6■■■■□ 21.8
TUSC3-213ENST00000515859 ARHGEF5Q12774 1597 aa37.37■■■■□ 3.57
TUSC3-213ENST00000515859 PTPRKQ15262 1439 aa37.36■■■■□ 3.57
TUSC3-213ENST00000515859 CFAP74Q9C0B2 1584 aa37.36■■■■□ 3.57
TUSC3-213ENST00000515859 ABCC1P33527 1531 aa37.35■■■■□ 3.57
TUSC3-213ENST00000515859 SYCP2Q9BX26 1530 aa37.33■■■■□ 3.57
TUSC3-213ENST00000515859 NEO1Q92859 1461 aa37.33■■■■□ 3.57
TUSC3-213ENST00000515859 AKNAQ7Z591 1439 aa37.33■■■■□ 3.57
TUSC3-213ENST00000515859 KIF13AQ9H1H9 1805 aa37.31■■■■□ 3.56
TUSC3-213ENST00000515859 CCDC141Q6ZP82 1450 aa37.3■■■■□ 3.56
TUSC3-213ENST00000515859 TSPY4P0CV99 314 aa37.29■■■■□ 3.56
TUSC3-213ENST00000515859 TSPY10P0CW01 314 aa37.29■■■■□ 3.56
TUSC3-213ENST00000515859 ADGRL1O94910 1474 aa37.28■■■■□ 3.56
TUSC3-213ENST00000515859 ARHGEF12Q9NZN5 1544 aa37.28■■■■□ 3.56
TUSC3-213ENST00000515859 SHANK2Q9UPX8 1470 aa37.26■■■■□ 3.56
TUSC3-213ENST00000515859 TEX14Q8IWB6 1497 aa37.25■■■■□ 3.55
TUSC3-213ENST00000515859 CHIC2Q9UKJ5 165 aa37.25■■■■□ 3.55
TUSC3-213ENST00000515859 ROCK1Q13464 1354 aa37.24■■■■□ 3.55
TUSC3-213ENST00000515859 SCAPERQ9BY12 1400 aa37.24■■■■□ 3.55
TUSC3-213ENST00000515859 CROCC2H7BZ55 1655 aa37.23■■■■□ 3.55
TUSC3-213ENST00000515859 C9orf84Q5VXU9 1444 aa37.19■■■■□ 3.54
TUSC3-213ENST00000515859 TRAPPC8Q9Y2L5 1435 aa37.19■■■■□ 3.54
TUSC3-213ENST00000515859 HFM1A2PYH4 1435 aa37.18■■■■□ 3.54
TUSC3-213ENST00000515859 ADGRL2O95490 1459 aa37.17■■■■□ 3.54
TUSC3-213ENST00000515859 PPRC1Q5VV67 1664 aaKnown RBP37.16■■■■□ 3.54
TUSC3-213ENST00000515859 SETD5Q9C0A6 1442 aa37.16■■■■□ 3.54
TUSC3-213ENST00000515859 ANKRD30AQ9BXX3 1397 aa37.15■■■■□ 3.54
TUSC3-213ENST00000515859 TSPOAP1O95153 1857 aa37.14■■■■□ 3.54
TUSC3-213ENST00000515859 NCOA1Q15788 1441 aa37.13■■■■□ 3.53
TUSC3-213ENST00000515859 MAST1Q9Y2H9 1570 aa37.13■■■■□ 3.53
TUSC3-213ENST00000515859 TRHP20396 242 aaPredicted RBP37.12■■■■□ 3.53
TUSC3-213ENST00000515859 AFAP1Q8N556 730 aa37.11■■■■□ 3.53
TUSC3-213ENST00000515859 RRP7BPQ9NSQ0 103 aa37.11■■■■□ 3.53
TUSC3-213ENST00000515859 NAIPQ13075 1403 aa37.11■■■■□ 3.53
TUSC3-213ENST00000515859 ZNF518AQ6AHZ1 1483 aa37.11■■■■□ 3.53
TUSC3-213ENST00000515859 ADGBQ8N7X0 1667 aa37.1■■■■□ 3.53
TUSC3-213ENST00000515859 DENND4BO75064 1496 aaPredicted RBP37.09■■■■□ 3.53
TUSC3-213ENST00000515859 POGZQ7Z3K3 1410 aa37.07■■■■□ 3.53
TUSC3-213ENST00000515859 HRCP23327 699 aa37.07■■■■□ 3.53
TUSC3-213ENST00000515859 SPAG9O60271 1321 aaKnown RBP37.07■■■■□ 3.52
TUSC3-213ENST00000515859 RTEL1-TNFRSF6BF6WH68 1400 aa37.07■■■■□ 3.52
TUSC3-213ENST00000515859 RAB3GAP2Q9H2M9 1393 aa37.05■■■■□ 3.52
TUSC3-213ENST00000515859 GCC2Q8IWJ2 1684 aa37.01■■■■□ 3.51
TUSC3-213ENST00000515859 KDM5CP41229 1560 aa36.99■■■■□ 3.51
TUSC3-213ENST00000515859 KIF15Q9NS87 1388 aa36.97■■■■□ 3.51
TUSC3-213ENST00000515859 PLXNC1O60486 1568 aa36.97■■■■□ 3.51
TUSC3-213ENST00000515859 RAPGEF3O95398 923 aa36.96■■■■□ 3.51
TUSC3-213ENST00000515859 ZFYVE16Q7Z3T8 1539 aa36.95■■■■□ 3.51
TUSC3-213ENST00000515859 ACIN1Q9UKV3 1341 aaKnown RBP36.95■■■■□ 3.51
TUSC3-213ENST00000515859 ATP7AQ04656 1500 aa36.93■■■■□ 3.5
TUSC3-213ENST00000515859 MLH3Q9UHC1 1453 aa36.93■■■■□ 3.5
TUSC3-213ENST00000515859 INO80Q9ULG1 1556 aaPredicted RBP36.93■■■■□ 3.5
TUSC3-213ENST00000515859 MYT1LQ9UL68 1186 aa36.91■■■■□ 3.5
TUSC3-213ENST00000515859 RICTORQ6R327 1708 aa36.91■■■■□ 3.5
TUSC3-213ENST00000515859 ANKRD50Q9ULJ7 1429 aa36.9■■■■□ 3.5
TUSC3-213ENST00000515859 DUOX2Q9NRD8 1548 aa36.85■■■■□ 3.49
TUSC3-213ENST00000515859 HECW2Q9P2P5 1572 aa36.85■■■■□ 3.49
TUSC3-213ENST00000515859 KIDINS220Q9ULH0 1771 aa36.83■■■■□ 3.49
TUSC3-213ENST00000515859 FRMPD1Q5SYB0 1578 aa36.83■■■■□ 3.49
TUSC3-213ENST00000515859 ZMYM4Q5VZL5 1548 aa36.81■■■■□ 3.48
TUSC3-213ENST00000515859 KDM6BO15054 1643 aa36.8■■■■□ 3.48
TUSC3-213ENST00000515859 COL17A1Q9UMD9 1497 aaPredicted RBP36.79■■■■□ 3.48
TUSC3-213ENST00000515859 MAGI2Q86UL8 1455 aa36.79■■■■□ 3.48
TUSC3-213ENST00000515859 ERBINQ96RT1 1412 aa36.78■■■■□ 3.48
TUSC3-213ENST00000515859 DHX29Q7Z478 1369 aaKnown RBP36.74■■■■□ 3.47
TUSC3-213ENST00000515859 CCER1Q8TC90 406 aaPredicted RBP36.74■■■■□ 3.47
TUSC3-213ENST00000515859 TRIM52Q96A61 297 aa36.7■■■■□ 3.47
TUSC3-213ENST00000515859 DHX57Q6P158 1386 aaKnown RBP36.7■■■■□ 3.47
TUSC3-213ENST00000515859 A2MP01023 1474 aa36.68■■■■□ 3.46
TUSC3-213ENST00000515859 ABCA6Q8N139 1617 aa36.67■■■■□ 3.46
TUSC3-213ENST00000515859 YEATS2Q9ULM3 1422 aa36.65■■■■□ 3.46
TUSC3-213ENST00000515859 DIP2CQ9Y2E4 1556 aa36.64■■■■□ 3.46
TUSC3-213ENST00000515859 EIF2AK4Q9P2K8 1649 aaKnown RBP36.6■■■■□ 3.45
TUSC3-213ENST00000515859 ATP10AO60312 1499 aa36.58■■■■□ 3.45
TUSC3-213ENST00000515859 CLSPNQ9HAW4 1339 aa36.57■■■■□ 3.45
TUSC3-213ENST00000515859 NUP155O75694 1391 aa36.57■■■■□ 3.44
TUSC3-213ENST00000515859 KIF3BO15066 747 aa36.56■■■■□ 3.44
TUSC3-213ENST00000515859 UNC13BO14795 1591 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms