RNA–Protein interactions for RNA: ENST00000515818.5

RPS3A-214, Transcript of ribosomal protein S3A, humanhuman

TSL 5

Gene RPS3A, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-214ENST00000515818 HOXB3P14651 431 aaPredicted RBP13.67□□□□□ -0.22
RPS3A-214ENST00000515818 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
RPS3A-214ENST00000515818 ST18O60284 1047 aa13.64□□□□□ -0.23
RPS3A-214ENST00000515818 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
RPS3A-214ENST00000515818 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
RPS3A-214ENST00000515818 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
RPS3A-214ENST00000515818 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
RPS3A-214ENST00000515818 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
RPS3A-214ENST00000515818 CRISPLD2Q9H0B8 497 aa13.58□□□□□ -0.24
RPS3A-214ENST00000515818 GPHNQ9NQX3 736 aaPredicted RBP13.58□□□□□ -0.24
RPS3A-214ENST00000515818 NCKAP5LQ9HCH0 1330 aa13.57□□□□□ -0.24
RPS3A-214ENST00000515818 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
RPS3A-214ENST00000515818 FOXK1P85037 733 aa13.53□□□□□ -0.24
RPS3A-214ENST00000515818 DSG2Q14126 1118 aa13.53□□□□□ -0.24
RPS3A-214ENST00000515818 POTEMA6NI47 508 aa13.52□□□□□ -0.25
RPS3A-214ENST00000515818 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
RPS3A-214ENST00000515818 PLPP6Q8IY26 295 aa13.49□□□□□ -0.25
RPS3A-214ENST00000515818 ZNF710Q8N1W2 664 aa13.49□□□□□ -0.25
RPS3A-214ENST00000515818 PDE4AP27815 886 aa13.48□□□□□ -0.25
RPS3A-214ENST00000515818 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
RPS3A-214ENST00000515818 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
RPS3A-214ENST00000515818 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
RPS3A-214ENST00000515818 GPR153Q6NV75 609 aa13.46□□□□□ -0.25
RPS3A-214ENST00000515818 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
RPS3A-214ENST00000515818 SLC34A2O95436 690 aa13.45□□□□□ -0.26
RPS3A-214ENST00000515818 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
RPS3A-214ENST00000515818 MFSD10Q14728 455 aa13.44□□□□□ -0.26
RPS3A-214ENST00000515818 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
RPS3A-214ENST00000515818 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
RPS3A-214ENST00000515818 KHSRPQ92945 711 aaKnown RBP eCLIP13.41□□□□□ -0.266e-9■□□□□ 10
RPS3A-214ENST00000515818 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
RPS3A-214ENST00000515818 EMP3P54852 163 aa13.4□□□□□ -0.26
RPS3A-214ENST00000515818 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
RPS3A-214ENST00000515818 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
RPS3A-214ENST00000515818 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
RPS3A-214ENST00000515818 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
RPS3A-214ENST00000515818 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
RPS3A-214ENST00000515818 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
RPS3A-214ENST00000515818 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
RPS3A-214ENST00000515818 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
RPS3A-214ENST00000515818 NUDT7P0C024 238 aa13.32□□□□□ -0.28
RPS3A-214ENST00000515818 KDM4FA0A1W2PPD8 638 aa13.31□□□□□ -0.28
RPS3A-214ENST00000515818 HS3ST6Q96QI5 342 aa13.31□□□□□ -0.28
RPS3A-214ENST00000515818 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPS3A-214ENST00000515818 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
RPS3A-214ENST00000515818 ERBB3P21860 1342 aa13.28□□□□□ -0.28
RPS3A-214ENST00000515818 CAMK2BQ13554 666 aa13.27□□□□□ -0.29
RPS3A-214ENST00000515818 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
RPS3A-214ENST00000515818 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
RPS3A-214ENST00000515818 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
RPS3A-214ENST00000515818 TBC1D12O60347 775 aa13.24□□□□□ -0.29
RPS3A-214ENST00000515818 LHX6Q9UPM6 363 aa13.24□□□□□ -0.29
RPS3A-214ENST00000515818 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
RPS3A-214ENST00000515818 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
RPS3A-214ENST00000515818 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
RPS3A-214ENST00000515818 EVI5O60447 810 aa13.15□□□□□ -0.3
RPS3A-214ENST00000515818 E2F4Q16254 413 aa13.15□□□□□ -0.3
RPS3A-214ENST00000515818 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
RPS3A-214ENST00000515818 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
RPS3A-214ENST00000515818 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
RPS3A-214ENST00000515818 DPYSL4O14531 572 aa13.14□□□□□ -0.31
RPS3A-214ENST00000515818 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
RPS3A-214ENST00000515818 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
RPS3A-214ENST00000515818 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
RPS3A-214ENST00000515818 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
RPS3A-214ENST00000515818 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
RPS3A-214ENST00000515818 FOSBP53539 338 aa13.05□□□□□ -0.32
RPS3A-214ENST00000515818 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
RPS3A-214ENST00000515818 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
RPS3A-214ENST00000515818 PDIA6Q15084 440 aa13.02□□□□□ -0.33
RPS3A-214ENST00000515818 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.33
RPS3A-214ENST00000515818 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
RPS3A-214ENST00000515818 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
RPS3A-214ENST00000515818 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
RPS3A-214ENST00000515818 PBX2P40425 430 aa12.99□□□□□ -0.33
RPS3A-214ENST00000515818 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
RPS3A-214ENST00000515818 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
RPS3A-214ENST00000515818 PTGER2P43116 358 aa12.97□□□□□ -0.33
RPS3A-214ENST00000515818 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
RPS3A-214ENST00000515818 PSEN2P49810 448 aa12.95□□□□□ -0.34
RPS3A-214ENST00000515818 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPS3A-214ENST00000515818 SPNS2Q8IVW8 549 aa12.95□□□□□ -0.34
RPS3A-214ENST00000515818 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
RPS3A-214ENST00000515818 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
RPS3A-214ENST00000515818 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
RPS3A-214ENST00000515818 PHF14O94880 888 aa12.94□□□□□ -0.34
RPS3A-214ENST00000515818 DDX12PQ92771 950 aa12.94□□□□□ -0.34
RPS3A-214ENST00000515818 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
RPS3A-214ENST00000515818 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
RPS3A-214ENST00000515818 DMRTA1Q5VZB9 504 aa12.92□□□□□ -0.34
RPS3A-214ENST00000515818 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
RPS3A-214ENST00000515818 KCNK17Q96T54 332 aa12.91□□□□□ -0.34
RPS3A-214ENST00000515818 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
RPS3A-214ENST00000515818 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
RPS3A-214ENST00000515818 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
RPS3A-214ENST00000515818 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
RPS3A-214ENST00000515818 EPAS1Q99814 870 aa12.88□□□□□ -0.35
RPS3A-214ENST00000515818 PTPREP23469 700 aa12.85□□□□□ -0.35
RPS3A-214ENST00000515818 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
RPS3A-214ENST00000515818 NBR1Q14596 966 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms