RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 HS3ST6Q96QI5 342 aa9.17□□□□□ -0.94
HMGCR-213ENST00000515776 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
HMGCR-213ENST00000515776 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
HMGCR-213ENST00000515776 MFRPQ9BY79 579 aa9.15□□□□□ -0.94
HMGCR-213ENST00000515776 HOXB1P14653 301 aaPredicted RBP9.14□□□□□ -0.95
HMGCR-213ENST00000515776 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
HMGCR-213ENST00000515776 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
HMGCR-213ENST00000515776 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
HMGCR-213ENST00000515776 ERBB3P21860 1342 aa9.08□□□□□ -0.96
HMGCR-213ENST00000515776 GPR153Q6NV75 609 aa9.06□□□□□ -0.96
HMGCR-213ENST00000515776 ZSWIM6Q9HCJ5 1215 aa9.06□□□□□ -0.96
HMGCR-213ENST00000515776 ARSIQ5FYB1 569 aa9.03□□□□□ -0.96
HMGCR-213ENST00000515776 VARS2Q5ST30 1063 aaKnown RBP9.03□□□□□ -0.96
HMGCR-213ENST00000515776 C2orf72A6NCS6 295 aa9.02□□□□□ -0.97
HMGCR-213ENST00000515776 KIF3CO14782 793 aa9.01□□□□□ -0.97
HMGCR-213ENST00000515776 PPP1R37O75864 691 aa9.01□□□□□ -0.97
HMGCR-213ENST00000515776 KHSRPQ92945 711 aaKnown RBP eCLIP9□□□□□ -0.977e-11■□□□□ 10.8
HMGCR-213ENST00000515776 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
HMGCR-213ENST00000515776 ZNF687Q8N1G0 1237 aa8.96□□□□□ -0.98
HMGCR-213ENST00000515776 TMC2Q8TDI7 906 aa8.96□□□□□ -0.98
HMGCR-213ENST00000515776 CHGAP10645 457 aaKnown RBP8.95□□□□□ -0.98
HMGCR-213ENST00000515776 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
HMGCR-213ENST00000515776 NUDT7P0C024 238 aa8.91□□□□□ -0.98
HMGCR-213ENST00000515776 SLC34A2O95436 690 aa8.9□□□□□ -0.98
HMGCR-213ENST00000515776 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
HMGCR-213ENST00000515776 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
HMGCR-213ENST00000515776 LHX6Q9UPM6 363 aa8.87□□□□□ -0.99
HMGCR-213ENST00000515776 ANKRD13DQ6ZTN6 518 aa8.86□□□□□ -0.99
HMGCR-213ENST00000515776 GPHNQ9NQX3 736 aaPredicted RBP8.85□□□□□ -0.99
HMGCR-213ENST00000515776 FOXK1P85037 733 aa8.84□□□□□ -0.99
HMGCR-213ENST00000515776 PLPP6Q8IY26 295 aa8.84□□□□□ -0.99
HMGCR-213ENST00000515776 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
HMGCR-213ENST00000515776 RNF166Q96A37 237 aaPredicted RBP8.83□□□□□ -1
HMGCR-213ENST00000515776 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
HMGCR-213ENST00000515776 DSG2Q14126 1118 aa8.82□□□□□ -1
HMGCR-213ENST00000515776 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
HMGCR-213ENST00000515776 AXIN2Q9Y2T1 843 aa8.81□□□□□ -1
HMGCR-213ENST00000515776 LSM11P83369 360 aaKnown RBP eCLIP8.8□□□□□ -1
HMGCR-213ENST00000515776 POTEEQ6S8J3 1075 aa8.8□□□□□ -1
HMGCR-213ENST00000515776 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
HMGCR-213ENST00000515776 RYDENQ9NUL5 291 aaKnown RBP8.79□□□□□ -1
HMGCR-213ENST00000515776 PBX2P40425 430 aa8.78□□□□□ -1
HMGCR-213ENST00000515776 PTGER2P43116 358 aa8.76□□□□□ -1.01
HMGCR-213ENST00000515776 TBC1D12O60347 775 aa8.75□□□□□ -1.01
HMGCR-213ENST00000515776 PSDA5PKW4 1024 aaPredicted RBP8.74□□□□□ -1.01
HMGCR-213ENST00000515776 DCAF8L2P0C7V8 631 aa8.74□□□□□ -1.01
HMGCR-213ENST00000515776 ARHGAP33O14559 1287 aa8.73□□□□□ -1.01
HMGCR-213ENST00000515776 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
HMGCR-213ENST00000515776 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
HMGCR-213ENST00000515776 OXER1Q8TDS5 423 aa8.71□□□□□ -1.02
HMGCR-213ENST00000515776 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGCR-213ENST00000515776 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
HMGCR-213ENST00000515776 PDE4AP27815 886 aa8.7□□□□□ -1.02
HMGCR-213ENST00000515776 PPP1R15BQ5SWA1 713 aa8.7□□□□□ -1.02
HMGCR-213ENST00000515776 PSEN2P49810 448 aa8.69□□□□□ -1.02
HMGCR-213ENST00000515776 PPP4R3BQ5MIZ7 849 aa8.69□□□□□ -1.02
HMGCR-213ENST00000515776 ADGRD1Q6QNK2 874 aa8.69□□□□□ -1.02
HMGCR-213ENST00000515776 DMRTA1Q5VZB9 504 aa8.68□□□□□ -1.02
HMGCR-213ENST00000515776 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
HMGCR-213ENST00000515776 TK2O00142 265 aa8.63□□□□□ -1.03
HMGCR-213ENST00000515776 ZNF454Q8N9F8 522 aa8.63□□□□□ -1.03
HMGCR-213ENST00000515776 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
HMGCR-213ENST00000515776 KCNK17Q96T54 332 aa8.63□□□□□ -1.03
HMGCR-213ENST00000515776 HRO43593 1189 aa8.62□□□□□ -1.03
HMGCR-213ENST00000515776 EVI5O60447 810 aa8.6□□□□□ -1.03
HMGCR-213ENST00000515776 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
HMGCR-213ENST00000515776 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
HMGCR-213ENST00000515776 ANO8Q9HCE9 1232 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-213ENST00000515776 MFSD10Q14728 455 aa8.59□□□□□ -1.03
HMGCR-213ENST00000515776 FOSBP53539 338 aa8.58□□□□□ -1.04
HMGCR-213ENST00000515776 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
HMGCR-213ENST00000515776 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
HMGCR-213ENST00000515776 HCSTQ9UBK5 93 aa8.58□□□□□ -1.04
HMGCR-213ENST00000515776 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
HMGCR-213ENST00000515776 EMILIN3Q9NT22 766 aa8.57□□□□□ -1.04
HMGCR-213ENST00000515776 VPS9D1Q9Y2B5 631 aa8.56□□□□□ -1.04
HMGCR-213ENST00000515776 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
HMGCR-213ENST00000515776 PTPREP23469 700 aa8.54□□□□□ -1.04
HMGCR-213ENST00000515776 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
HMGCR-213ENST00000515776 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
HMGCR-213ENST00000515776 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
HMGCR-213ENST00000515776 SLC4A5Q9BY07 1137 aa8.52□□□□□ -1.05
HMGCR-213ENST00000515776 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
HMGCR-213ENST00000515776 BBXQ8WY36 941 aaPredicted RBP8.5□□□□□ -1.05
HMGCR-213ENST00000515776 ZBED2Q9BTP6 218 aa8.5□□□□□ -1.05
HMGCR-213ENST00000515776 BHMG1C9JSJ3 638 aaPredicted RBP8.49□□□□□ -1.05
HMGCR-213ENST00000515776 PCDHGA10Q9Y5H3 936 aa8.49□□□□□ -1.05
HMGCR-213ENST00000515776 PTPN5P54829 565 aa8.47□□□□□ -1.05
HMGCR-213ENST00000515776 CAMK2BQ13554 666 aa8.46□□□□□ -1.06
HMGCR-213ENST00000515776 DPYSL4O14531 572 aa8.45□□□□□ -1.06
HMGCR-213ENST00000515776 MRPL50Q8N5N7 158 aaKnown RBP8.45□□□□□ -1.06
HMGCR-213ENST00000515776 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
HMGCR-213ENST00000515776 PHF14O94880 888 aa8.44□□□□□ -1.06
HMGCR-213ENST00000515776 COL9A1P20849 921 aa8.43□□□□□ -1.06
HMGCR-213ENST00000515776 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
HMGCR-213ENST00000515776 PPP1R3GB7ZBB8 358 aa8.42□□□□□ -1.06
HMGCR-213ENST00000515776 PROX2Q3B8N5 592 aa8.42□□□□□ -1.06
HMGCR-213ENST00000515776 THSD4Q6ZMP0 1018 aa8.42□□□□□ -1.06
HMGCR-213ENST00000515776 SPRYD3Q8NCJ5 442 aa8.42□□□□□ -1.06
HMGCR-213ENST00000515776 WNT2BQ93097 391 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms