RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
LMNA-224ENST00000515711 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
LMNA-224ENST00000515711 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
LMNA-224ENST00000515711 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
LMNA-224ENST00000515711 ZCCHC11Q5TAX3 1644 aaKnown RBP17.86■□□□□ 0.45
LMNA-224ENST00000515711 ARID3CA6NKF2 412 aa17.85■□□□□ 0.45
LMNA-224ENST00000515711 GLI2P10070 1586 aa17.84■□□□□ 0.45
LMNA-224ENST00000515711 ASXL2Q76L83 1435 aa17.84■□□□□ 0.45
LMNA-224ENST00000515711 SOCS7O14512 581 aa17.84■□□□□ 0.45
LMNA-224ENST00000515711 GCC2Q8IWJ2 1684 aa17.83■□□□□ 0.45
LMNA-224ENST00000515711 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
LMNA-224ENST00000515711 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
LMNA-224ENST00000515711 KDM5BQ9UGL1 1544 aa17.82■□□□□ 0.44
LMNA-224ENST00000515711 AKNAQ7Z591 1439 aa17.81■□□□□ 0.44
LMNA-224ENST00000515711 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
LMNA-224ENST00000515711 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
LMNA-224ENST00000515711 CROCC2H7BZ55 1655 aa17.8■□□□□ 0.44
LMNA-224ENST00000515711 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
LMNA-224ENST00000515711 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
LMNA-224ENST00000515711 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
LMNA-224ENST00000515711 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
LMNA-224ENST00000515711 ITGAEP38570 1179 aa17.77■□□□□ 0.44
LMNA-224ENST00000515711 CAMSAP2Q08AD1 1489 aa17.76■□□□□ 0.43
LMNA-224ENST00000515711 HFM1A2PYH4 1435 aa17.76■□□□□ 0.43
LMNA-224ENST00000515711 RAB3GAP2Q9H2M9 1393 aa17.76■□□□□ 0.43
LMNA-224ENST00000515711 DISP3Q9P2K9 1392 aa17.76■□□□□ 0.43
LMNA-224ENST00000515711 CDC42BPBQ9Y5S2 1711 aa17.74■□□□□ 0.43
LMNA-224ENST00000515711 TEX14Q8IWB6 1497 aa17.73■□□□□ 0.43
LMNA-224ENST00000515711 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
LMNA-224ENST00000515711 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
LMNA-224ENST00000515711 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
LMNA-224ENST00000515711 DAPK1P53355 1430 aa17.72■□□□□ 0.43
LMNA-224ENST00000515711 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
LMNA-224ENST00000515711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.42
LMNA-224ENST00000515711 ARHGEF5Q12774 1597 aa17.7■□□□□ 0.42
LMNA-224ENST00000515711 ROCK1Q13464 1354 aa17.69■□□□□ 0.42
LMNA-224ENST00000515711 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
LMNA-224ENST00000515711 SHANK2Q9UPX8 1470 aa17.68■□□□□ 0.42
LMNA-224ENST00000515711 ACIN1Q9UKV3 1341 aaKnown RBP17.68■□□□□ 0.42
LMNA-224ENST00000515711 NAIPQ13075 1403 aa17.67■□□□□ 0.42
LMNA-224ENST00000515711 ARAP3Q8WWN8 1544 aa17.67■□□□□ 0.42
LMNA-224ENST00000515711 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
LMNA-224ENST00000515711 ABCC5O15440 1437 aa17.65■□□□□ 0.42
LMNA-224ENST00000515711 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
LMNA-224ENST00000515711 ADGRL2O95490 1459 aa17.64■□□□□ 0.41
LMNA-224ENST00000515711 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
LMNA-224ENST00000515711 ARHGAP5Q13017 1502 aa17.63■□□□□ 0.41
LMNA-224ENST00000515711 PTPRMP28827 1452 aa17.63■□□□□ 0.41
LMNA-224ENST00000515711 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
LMNA-224ENST00000515711 MAST1Q9Y2H9 1570 aa17.59■□□□□ 0.41
LMNA-224ENST00000515711 CCDC141Q6ZP82 1450 aa17.58■□□□□ 0.41
LMNA-224ENST00000515711 CERKQ8TCT0 537 aa17.58■□□□□ 0.4
LMNA-224ENST00000515711 PLCH2O75038 1416 aa17.57■□□□□ 0.4
LMNA-224ENST00000515711 ZNF644Q9H582 1327 aaPredicted RBP17.57■□□□□ 0.4
LMNA-224ENST00000515711 SYCP2Q9BX26 1530 aa17.56■□□□□ 0.4
LMNA-224ENST00000515711 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
LMNA-224ENST00000515711 RSPH4AQ5TD94 716 aa17.55■□□□□ 0.4
LMNA-224ENST00000515711 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
LMNA-224ENST00000515711 ABCC1P33527 1531 aa17.55■□□□□ 0.4
LMNA-224ENST00000515711 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
LMNA-224ENST00000515711 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
LMNA-224ENST00000515711 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
LMNA-224ENST00000515711 C9orf84Q5VXU9 1444 aa17.54■□□□□ 0.4
LMNA-224ENST00000515711 ADAMTSL3P82987 1691 aa17.53■□□□□ 0.4
LMNA-224ENST00000515711 PLXNC1O60486 1568 aa17.53■□□□□ 0.4
LMNA-224ENST00000515711 HSPA2P54652 639 aa17.52■□□□□ 0.4
LMNA-224ENST00000515711 NCOA1Q15788 1441 aa17.52■□□□□ 0.4
LMNA-224ENST00000515711 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.39
LMNA-224ENST00000515711 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
LMNA-224ENST00000515711 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
LMNA-224ENST00000515711 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
LMNA-224ENST00000515711 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
LMNA-224ENST00000515711 EFCAB2Q5VUJ9 269 aa17.47■□□□□ 0.39
LMNA-224ENST00000515711 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
LMNA-224ENST00000515711 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
LMNA-224ENST00000515711 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
LMNA-224ENST00000515711 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
LMNA-224ENST00000515711 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
LMNA-224ENST00000515711 FANCAO15360 1455 aa17.43■□□□□ 0.38
LMNA-224ENST00000515711 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
LMNA-224ENST00000515711 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
LMNA-224ENST00000515711 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
LMNA-224ENST00000515711 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
LMNA-224ENST00000515711 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
LMNA-224ENST00000515711 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
LMNA-224ENST00000515711 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
LMNA-224ENST00000515711 UNC13BO14795 1591 aa17.39■□□□□ 0.37
LMNA-224ENST00000515711 INO80Q9ULG1 1556 aaPredicted RBP17.39■□□□□ 0.37
LMNA-224ENST00000515711 ARID4BQ4LE39 1312 aaPredicted RBP17.39■□□□□ 0.37
LMNA-224ENST00000515711 RTEL1-TNFRSF6BF6WH68 1400 aa17.38■□□□□ 0.37
LMNA-224ENST00000515711 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
LMNA-224ENST00000515711 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
LMNA-224ENST00000515711 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
LMNA-224ENST00000515711 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
LMNA-224ENST00000515711 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
LMNA-224ENST00000515711 PZPP20742 1482 aa17.35■□□□□ 0.37
LMNA-224ENST00000515711 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
LMNA-224ENST00000515711 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
LMNA-224ENST00000515711 NEO1Q92859 1461 aa17.33■□□□□ 0.37
LMNA-224ENST00000515711 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms