RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
PHF3-212ENST00000515594 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
PHF3-212ENST00000515594 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
PHF3-212ENST00000515594 KIF7Q2M1P5 1343 aa17.78■□□□□ 0.44
PHF3-212ENST00000515594 GCC2Q8IWJ2 1684 aa17.78■□□□□ 0.44
PHF3-212ENST00000515594 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
PHF3-212ENST00000515594 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
PHF3-212ENST00000515594 TCOF1Q13428 1488 aaKnown RBP17.74■□□□□ 0.43
PHF3-212ENST00000515594 ZNF777Q9ULD5 760 aaPredicted RBP17.73■□□□□ 0.43
PHF3-212ENST00000515594 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
PHF3-212ENST00000515594 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
PHF3-212ENST00000515594 ANKRD30BQ9BXX2 1392 aa17.72■□□□□ 0.43
PHF3-212ENST00000515594 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.43
PHF3-212ENST00000515594 AKNAQ7Z591 1439 aa17.71■□□□□ 0.43
PHF3-212ENST00000515594 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
PHF3-212ENST00000515594 DAPK1P53355 1430 aa17.69■□□□□ 0.42
PHF3-212ENST00000515594 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
PHF3-212ENST00000515594 TEX14Q8IWB6 1497 aa17.68■□□□□ 0.42
PHF3-212ENST00000515594 ABCC5O15440 1437 aa17.68■□□□□ 0.42
PHF3-212ENST00000515594 RPRD2Q5VT52 1461 aaKnown RBP17.67■□□□□ 0.42
PHF3-212ENST00000515594 ZBED9Q6R2W3 1325 aa17.67■□□□□ 0.42
PHF3-212ENST00000515594 WDR62O43379 1518 aa17.67■□□□□ 0.42
PHF3-212ENST00000515594 FANCIQ9NVI1 1328 aa17.66■□□□□ 0.42
PHF3-212ENST00000515594 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
PHF3-212ENST00000515594 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
PHF3-212ENST00000515594 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
PHF3-212ENST00000515594 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
PHF3-212ENST00000515594 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
PHF3-212ENST00000515594 PRG4Q92954 1404 aaPredicted RBP17.61■□□□□ 0.41
PHF3-212ENST00000515594 KDM2AQ9Y2K7 1162 aa17.6■□□□□ 0.41
PHF3-212ENST00000515594 BCORL1Q5H9F3 1711 aa17.6■□□□□ 0.41
PHF3-212ENST00000515594 PKD2Q13563 968 aa17.6■□□□□ 0.41
PHF3-212ENST00000515594 ADAMTS12P58397 1594 aa17.59■□□□□ 0.41
PHF3-212ENST00000515594 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.41
PHF3-212ENST00000515594 NBR1Q14596 966 aa17.58■□□□□ 0.41
PHF3-212ENST00000515594 NUP153P49790 1475 aaKnown RBP17.58■□□□□ 0.41
PHF3-212ENST00000515594 USP47Q96K76 1375 aa17.58■□□□□ 0.41
PHF3-212ENST00000515594 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
PHF3-212ENST00000515594 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.4
PHF3-212ENST00000515594 PZPP20742 1482 aa17.57■□□□□ 0.4
PHF3-212ENST00000515594 DNMT1P26358 1616 aaKnown RBP17.56■□□□□ 0.4
PHF3-212ENST00000515594 FBLN2P98095 1184 aa17.56■□□□□ 0.4
PHF3-212ENST00000515594 DISP1Q96F81 1524 aa17.54■□□□□ 0.4
PHF3-212ENST00000515594 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
PHF3-212ENST00000515594 CCDC136Q96JN2 1154 aa17.53■□□□□ 0.4
PHF3-212ENST00000515594 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
PHF3-212ENST00000515594 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
PHF3-212ENST00000515594 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
PHF3-212ENST00000515594 NUDCQ9Y266 331 aa17.51■□□□□ 0.39
PHF3-212ENST00000515594 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
PHF3-212ENST00000515594 KIF14Q15058 1648 aa17.5■□□□□ 0.39
PHF3-212ENST00000515594 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
PHF3-212ENST00000515594 KIAA0556O60303 1618 aa17.49■□□□□ 0.39
PHF3-212ENST00000515594 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
PHF3-212ENST00000515594 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
PHF3-212ENST00000515594 PNISRQ8TF01 805 aaKnown RBP17.47■□□□□ 0.39
PHF3-212ENST00000515594 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
PHF3-212ENST00000515594 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
PHF3-212ENST00000515594 KIAA1107Q9UPP5 1409 aa17.46■□□□□ 0.38
PHF3-212ENST00000515594 DCAF11Q8TEB1 546 aa17.45■□□□□ 0.38
PHF3-212ENST00000515594 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
PHF3-212ENST00000515594 NUP155O75694 1391 aa17.44■□□□□ 0.38
PHF3-212ENST00000515594 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
PHF3-212ENST00000515594 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
PHF3-212ENST00000515594 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
PHF3-212ENST00000515594 SKAP1Q86WV1 359 aa17.44■□□□□ 0.38
PHF3-212ENST00000515594 KDM5CP41229 1560 aa17.42■□□□□ 0.38
PHF3-212ENST00000515594 NPM2Q86SE8 214 aaKnown RBP17.42■□□□□ 0.38
PHF3-212ENST00000515594 TROQ12816 1431 aaPredicted RBP17.42■□□□□ 0.38
PHF3-212ENST00000515594 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
PHF3-212ENST00000515594 RGL3Q3MIN7 710 aa17.41■□□□□ 0.38
PHF3-212ENST00000515594 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
PHF3-212ENST00000515594 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.384e-7■■■■□ 20.1
PHF3-212ENST00000515594 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
PHF3-212ENST00000515594 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
PHF3-212ENST00000515594 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.38
PHF3-212ENST00000515594 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
PHF3-212ENST00000515594 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
PHF3-212ENST00000515594 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
PHF3-212ENST00000515594 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
PHF3-212ENST00000515594 PLIN1O60240 522 aa17.36■□□□□ 0.37
PHF3-212ENST00000515594 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
PHF3-212ENST00000515594 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
PHF3-212ENST00000515594 CC2D1BQ5T0F9 858 aaKnown RBP17.34■□□□□ 0.37
PHF3-212ENST00000515594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■■□□□ 13.7
PHF3-212ENST00000515594 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
PHF3-212ENST00000515594 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
PHF3-212ENST00000515594 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
PHF3-212ENST00000515594 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
PHF3-212ENST00000515594 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
PHF3-212ENST00000515594 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
PHF3-212ENST00000515594 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
PHF3-212ENST00000515594 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
PHF3-212ENST00000515594 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
PHF3-212ENST00000515594 CROCC2H7BZ55 1655 aa17.31■□□□□ 0.36
PHF3-212ENST00000515594 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
PHF3-212ENST00000515594 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
PHF3-212ENST00000515594 ITSN2Q9NZM3 1697 aa17.3■□□□□ 0.36
PHF3-212ENST00000515594 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
PHF3-212ENST00000515594 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms