RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
PDCD6-211ENST00000515587 ILDR2Q71H61 639 aa23.48■■□□□ 1.35
PDCD6-211ENST00000515587 CDC42BPAQ5VT25 1732 aa23.47■■□□□ 1.35
PDCD6-211ENST00000515587 PLCH2O75038 1416 aa23.46■■□□□ 1.35
PDCD6-211ENST00000515587 PREX2Q70Z35 1606 aa23.46■■□□□ 1.35
PDCD6-211ENST00000515587 CCNB3Q8WWL7 1395 aa23.46■■□□□ 1.35
PDCD6-211ENST00000515587 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
PDCD6-211ENST00000515587 ARAP3Q8WWN8 1544 aa23.45■■□□□ 1.34
PDCD6-211ENST00000515587 NCOA2Q15596 1464 aa23.45■■□□□ 1.34
PDCD6-211ENST00000515587 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
PDCD6-211ENST00000515587 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
PDCD6-211ENST00000515587 ADAMTSL3P82987 1691 aa23.43■■□□□ 1.34
PDCD6-211ENST00000515587 FANCAO15360 1455 aa23.43■■□□□ 1.34
PDCD6-211ENST00000515587 NEO1Q92859 1461 aa23.43■■□□□ 1.34
PDCD6-211ENST00000515587 PHLDB1Q86UU1 1377 aa23.41■■□□□ 1.34
PDCD6-211ENST00000515587 SOCS7O14512 581 aa23.41■■□□□ 1.34
PDCD6-211ENST00000515587 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
PDCD6-211ENST00000515587 GPATCH8Q9UKJ3 1502 aaKnown RBP23.39■■□□□ 1.34
PDCD6-211ENST00000515587 DISP3Q9P2K9 1392 aa23.37■■□□□ 1.33
PDCD6-211ENST00000515587 AKNAQ7Z591 1439 aa23.36■■□□□ 1.33
PDCD6-211ENST00000515587 HSPA2P54652 639 aa23.36■■□□□ 1.33
PDCD6-211ENST00000515587 CFDP1Q9UEE9 299 aaPredicted RBP23.36■■□□□ 1.33
PDCD6-211ENST00000515587 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
PDCD6-211ENST00000515587 RAPGEF3O95398 923 aa23.32■■□□□ 1.32
PDCD6-211ENST00000515587 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
PDCD6-211ENST00000515587 MADDQ8WXG6 1647 aa23.3■■□□□ 1.32
PDCD6-211ENST00000515587 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
PDCD6-211ENST00000515587 MYOM3Q5VTT5 1437 aa23.3■■□□□ 1.32
PDCD6-211ENST00000515587 ARID4BQ4LE39 1312 aaPredicted RBP23.3■■□□□ 1.32
PDCD6-211ENST00000515587 PLEKHH2Q8IVE3 1493 aa23.28■■□□□ 1.32
PDCD6-211ENST00000515587 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
PDCD6-211ENST00000515587 BCORL1Q5H9F3 1711 aa23.27■■□□□ 1.32
PDCD6-211ENST00000515587 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
PDCD6-211ENST00000515587 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
PDCD6-211ENST00000515587 ABCC1P33527 1531 aa23.26■■□□□ 1.31
PDCD6-211ENST00000515587 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
PDCD6-211ENST00000515587 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
PDCD6-211ENST00000515587 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
PDCD6-211ENST00000515587 CAMSAP2Q08AD1 1489 aa23.22■■□□□ 1.31
PDCD6-211ENST00000515587 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
PDCD6-211ENST00000515587 FGD6Q6ZV73 1430 aa23.2■■□□□ 1.3
PDCD6-211ENST00000515587 KIAA1107Q9UPP5 1409 aa23.2■■□□□ 1.3
PDCD6-211ENST00000515587 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
PDCD6-211ENST00000515587 POGZQ7Z3K3 1410 aa23.19■■□□□ 1.3
PDCD6-211ENST00000515587 ZNF518AQ6AHZ1 1483 aa23.18■■□□□ 1.3
PDCD6-211ENST00000515587 ZNF644Q9H582 1327 aaPredicted RBP23.18■■□□□ 1.3
PDCD6-211ENST00000515587 FRMPD1Q5SYB0 1578 aa23.18■■□□□ 1.3
PDCD6-211ENST00000515587 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
PDCD6-211ENST00000515587 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
PDCD6-211ENST00000515587 ARHGEF12Q9NZN5 1544 aa23.16■■□□□ 1.3
PDCD6-211ENST00000515587 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
PDCD6-211ENST00000515587 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
PDCD6-211ENST00000515587 TCOF1Q13428 1488 aaKnown RBP23.11■■□□□ 1.29
PDCD6-211ENST00000515587 KDM5CP41229 1560 aa23.11■■□□□ 1.29
PDCD6-211ENST00000515587 ARHGEF5Q12774 1597 aa23.11■■□□□ 1.29
PDCD6-211ENST00000515587 RSPH4AQ5TD94 716 aa23.11■■□□□ 1.29
PDCD6-211ENST00000515587 AFAP1Q8N556 730 aa23.11■■□□□ 1.29
PDCD6-211ENST00000515587 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
PDCD6-211ENST00000515587 MBD5Q9P267 1494 aa23.1■■□□□ 1.29
PDCD6-211ENST00000515587 CCDC141Q6ZP82 1450 aa23.09■■□□□ 1.29
PDCD6-211ENST00000515587 MAGI2Q86UL8 1455 aa23.09■■□□□ 1.29
PDCD6-211ENST00000515587 FAM50AQ14320 339 aaKnown RBP23.08■■□□□ 1.29
PDCD6-211ENST00000515587 ZFYVE16Q7Z3T8 1539 aa23.07■■□□□ 1.28
PDCD6-211ENST00000515587 SPAG9O60271 1321 aaKnown RBP23.07■■□□□ 1.28
PDCD6-211ENST00000515587 SPATA31D1Q6ZQQ2 1576 aa23.06■■□□□ 1.28
PDCD6-211ENST00000515587 ARHGEF40Q8TER5 1519 aa23.05■■□□□ 1.28
PDCD6-211ENST00000515587 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
PDCD6-211ENST00000515587 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
PDCD6-211ENST00000515587 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
PDCD6-211ENST00000515587 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
PDCD6-211ENST00000515587 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
PDCD6-211ENST00000515587 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
PDCD6-211ENST00000515587 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
PDCD6-211ENST00000515587 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
PDCD6-211ENST00000515587 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
PDCD6-211ENST00000515587 MLECQ14165 292 aa23■■□□□ 1.27
PDCD6-211ENST00000515587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
PDCD6-211ENST00000515587 DAPK1P53355 1430 aa22.99■■□□□ 1.27
PDCD6-211ENST00000515587 YEATS2Q9ULM3 1422 aa22.99■■□□□ 1.27
PDCD6-211ENST00000515587 MAST1Q9Y2H9 1570 aa22.98■■□□□ 1.27
PDCD6-211ENST00000515587 RTEL1-TNFRSF6BF6WH68 1400 aa22.98■■□□□ 1.27
PDCD6-211ENST00000515587 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
PDCD6-211ENST00000515587 ABCC5O15440 1437 aa22.97■■□□□ 1.27
PDCD6-211ENST00000515587 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
PDCD6-211ENST00000515587 ATP10AO60312 1499 aa22.96■■□□□ 1.27
PDCD6-211ENST00000515587 SHANK2Q9UPX8 1470 aa22.96■■□□□ 1.27
PDCD6-211ENST00000515587 DIP2CQ9Y2E4 1556 aa22.96■■□□□ 1.27
PDCD6-211ENST00000515587 ADGBQ8N7X0 1667 aa22.95■■□□□ 1.26
PDCD6-211ENST00000515587 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
PDCD6-211ENST00000515587 PLXNC1O60486 1568 aa22.9■■□□□ 1.26
PDCD6-211ENST00000515587 REREQ9P2R6 1566 aa22.89■■□□□ 1.26
PDCD6-211ENST00000515587 ITGAEP38570 1179 aa22.89■■□□□ 1.25
PDCD6-211ENST00000515587 CEBPAP49715 358 aaPredicted RBP22.89■■□□□ 1.25
PDCD6-211ENST00000515587 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
PDCD6-211ENST00000515587 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
PDCD6-211ENST00000515587 ANKRD30AQ9BXX3 1397 aa22.88■■□□□ 1.25
PDCD6-211ENST00000515587 A2MP01023 1474 aa22.87■■□□□ 1.25
PDCD6-211ENST00000515587 FER1L4A9Z1Z3 1794 aa22.84■■□□□ 1.25
PDCD6-211ENST00000515587 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
PDCD6-211ENST00000515587 ADGRL2O95490 1459 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms