RNA–Protein interactions for RNA: ENST00000515507.5

TMEM173-215, Transcript of transmembrane protein 173, humanhuman

TSL 4

Gene TMEM173, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-215ENST00000515507 KDM4FA0A1W2PPD8 638 aa21.6■■□□□ 1.05
TMEM173-215ENST00000515507 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
TMEM173-215ENST00000515507 ITSN2Q9NZM3 1697 aa21.59■■□□□ 1.05
TMEM173-215ENST00000515507 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
TMEM173-215ENST00000515507 SCAPERQ9BY12 1400 aa21.58■■□□□ 1.05
TMEM173-215ENST00000515507 MTUS2Q5JR59 1369 aa21.58■■□□□ 1.04
TMEM173-215ENST00000515507 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
TMEM173-215ENST00000515507 EHBP1L1Q8N3D4 1523 aa21.56■■□□□ 1.04
TMEM173-215ENST00000515507 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
TMEM173-215ENST00000515507 POGZQ7Z3K3 1410 aa21.55■■□□□ 1.04
TMEM173-215ENST00000515507 SUPT6HQ7KZ85 1726 aaKnown RBP21.54■■□□□ 1.04
TMEM173-215ENST00000515507 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
TMEM173-215ENST00000515507 TIAM1Q13009 1591 aa21.53■■□□□ 1.04
TMEM173-215ENST00000515507 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.03
TMEM173-215ENST00000515507 ABCC1P33527 1531 aa21.51■■□□□ 1.03
TMEM173-215ENST00000515507 ZNF518AQ6AHZ1 1483 aa21.49■■□□□ 1.03
TMEM173-215ENST00000515507 SAMD9LQ8IVG5 1584 aa21.48■■□□□ 1.03
TMEM173-215ENST00000515507 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
TMEM173-215ENST00000515507 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
TMEM173-215ENST00000515507 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
TMEM173-215ENST00000515507 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
TMEM173-215ENST00000515507 SIGLEC1Q9BZZ2 1709 aa21.47■■□□□ 1.03
TMEM173-215ENST00000515507 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
TMEM173-215ENST00000515507 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
TMEM173-215ENST00000515507 KDM5CP41229 1560 aa21.47■■□□□ 1.03
TMEM173-215ENST00000515507 ADAMTSL3P82987 1691 aa21.47■■□□□ 1.03
TMEM173-215ENST00000515507 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
TMEM173-215ENST00000515507 YEATS2Q9ULM3 1422 aa21.46■■□□□ 1.03
TMEM173-215ENST00000515507 SYCP2Q9BX26 1530 aa21.43■■□□□ 1.02
TMEM173-215ENST00000515507 MADDQ8WXG6 1647 aa21.43■■□□□ 1.02
TMEM173-215ENST00000515507 RIMS1Q86UR5 1692 aaKnown RBP21.43■■□□□ 1.02
TMEM173-215ENST00000515507 FER1L4A9Z1Z3 1794 aa21.43■■□□□ 1.02
TMEM173-215ENST00000515507 ARHGEF12Q9NZN5 1544 aa21.41■■□□□ 1.02
TMEM173-215ENST00000515507 AFAP1Q8N556 730 aa21.41■■□□□ 1.02
TMEM173-215ENST00000515507 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
TMEM173-215ENST00000515507 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
TMEM173-215ENST00000515507 ABCA6Q8N139 1617 aa21.4■■□□□ 1.02
TMEM173-215ENST00000515507 DIP2CQ9Y2E4 1556 aa21.39■■□□□ 1.01
TMEM173-215ENST00000515507 NCOA2Q15596 1464 aa21.39■■□□□ 1.01
TMEM173-215ENST00000515507 TRAPPC8Q9Y2L5 1435 aa21.38■■□□□ 1.01
TMEM173-215ENST00000515507 ATP10AO60312 1499 aa21.38■■□□□ 1.01
TMEM173-215ENST00000515507 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
TMEM173-215ENST00000515507 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
TMEM173-215ENST00000515507 C9orf84Q5VXU9 1444 aa21.37■■□□□ 1.01
TMEM173-215ENST00000515507 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
TMEM173-215ENST00000515507 APLP2Q06481 763 aa21.34■■□□□ 1.01
TMEM173-215ENST00000515507 MLH3Q9UHC1 1453 aa21.33■■□□□ 1.01
TMEM173-215ENST00000515507 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
TMEM173-215ENST00000515507 MLECQ14165 292 aa21.31■■□□□ 1
TMEM173-215ENST00000515507 KIAA1107Q9UPP5 1409 aa21.3■■□□□ 1
TMEM173-215ENST00000515507 PTPRMP28827 1452 aa21.3■■□□□ 1
TMEM173-215ENST00000515507 REREQ9P2R6 1566 aa21.3■■□□□ 1
TMEM173-215ENST00000515507 INO80Q9ULG1 1556 aaPredicted RBP21.3■■□□□ 1
TMEM173-215ENST00000515507 ATP7AQ04656 1500 aa21.29■■□□□ 1
TMEM173-215ENST00000515507 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
TMEM173-215ENST00000515507 CAMSAP2Q08AD1 1489 aa21.27■■□□□ 1
TMEM173-215ENST00000515507 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
TMEM173-215ENST00000515507 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
TMEM173-215ENST00000515507 ZNF644Q9H582 1327 aaPredicted RBP21.27■□□□□ 0.99
TMEM173-215ENST00000515507 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
TMEM173-215ENST00000515507 MBD5Q9P267 1494 aa21.2■□□□□ 0.98
TMEM173-215ENST00000515507 AGLP35573 1532 aa21.2■□□□□ 0.98
TMEM173-215ENST00000515507 CCDC141Q6ZP82 1450 aa21.2■□□□□ 0.98
TMEM173-215ENST00000515507 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
TMEM173-215ENST00000515507 MYOM3Q5VTT5 1437 aa21.19■□□□□ 0.98
TMEM173-215ENST00000515507 C3P01024 1663 aa21.16■□□□□ 0.98
TMEM173-215ENST00000515507 SETD1BQ9UPS6 1966 aaKnown RBP21.16■□□□□ 0.98
TMEM173-215ENST00000515507 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
TMEM173-215ENST00000515507 PLXNC1O60486 1568 aa21.15■□□□□ 0.98
TMEM173-215ENST00000515507 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
TMEM173-215ENST00000515507 A2MP01023 1474 aa21.14■□□□□ 0.98
TMEM173-215ENST00000515507 MIA2Q96PC5 1412 aa21.13■□□□□ 0.97
TMEM173-215ENST00000515507 CLTCQ00610 1675 aaKnown RBP21.13■□□□□ 0.97
TMEM173-215ENST00000515507 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
TMEM173-215ENST00000515507 RTEL1-TNFRSF6BF6WH68 1400 aa21.12■□□□□ 0.97
TMEM173-215ENST00000515507 PREX1Q8TCU6 1659 aa21.12■□□□□ 0.97
TMEM173-215ENST00000515507 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
TMEM173-215ENST00000515507 MROH2AA6NES4 1674 aa21.12■□□□□ 0.97
TMEM173-215ENST00000515507 TSPY4P0CV99 314 aa21.08■□□□□ 0.97
TMEM173-215ENST00000515507 TSPY10P0CW01 314 aa21.08■□□□□ 0.97
TMEM173-215ENST00000515507 MAST1Q9Y2H9 1570 aa21.08■□□□□ 0.97
TMEM173-215ENST00000515507 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
TMEM173-215ENST00000515507 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
TMEM173-215ENST00000515507 CEBPAP49715 358 aaPredicted RBP21.04■□□□□ 0.96
TMEM173-215ENST00000515507 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
TMEM173-215ENST00000515507 LMTK3Q96Q04 1460 aa21.03■□□□□ 0.96
TMEM173-215ENST00000515507 GGT6Q6P531 493 aa21.02■□□□□ 0.96
TMEM173-215ENST00000515507 DHX29Q7Z478 1369 aaKnown RBP21.01■□□□□ 0.95
TMEM173-215ENST00000515507 CFAP65Q6ZU64 1925 aaKnown RBP21■□□□□ 0.95
TMEM173-215ENST00000515507 EIF2AK4Q9P2K8 1649 aaKnown RBP20.99■□□□□ 0.95
TMEM173-215ENST00000515507 TCOF1Q13428 1488 aaKnown RBP20.99■□□□□ 0.95
TMEM173-215ENST00000515507 KIF3BO15066 747 aa20.97■□□□□ 0.95
TMEM173-215ENST00000515507 ILDR1Q86SU0 546 aaPredicted RBP20.97■□□□□ 0.95
TMEM173-215ENST00000515507 SHANK2Q9UPX8 1470 aa20.96■□□□□ 0.95
TMEM173-215ENST00000515507 DAPK1P53355 1430 aa20.95■□□□□ 0.95
TMEM173-215ENST00000515507 RNF17Q9BXT8 1623 aaKnown RBP20.95■□□□□ 0.94
TMEM173-215ENST00000515507 CEP152O94986 1710 aa20.95■□□□□ 0.94
TMEM173-215ENST00000515507 ABCC5O15440 1437 aa20.94■□□□□ 0.94
TMEM173-215ENST00000515507 FAM50AQ14320 339 aaKnown RBP20.93■□□□□ 0.94
TMEM173-215ENST00000515507 UHRF1BP1Q6BDS2 1440 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms