RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
RUFY3-215ENST00000515479 EMP3P54852 163 aa13.32□□□□□ -0.28
RUFY3-215ENST00000515479 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
RUFY3-215ENST00000515479 CDAN1Q8IWY9 1227 aa13.29□□□□□ -0.28
RUFY3-215ENST00000515479 C2orf72A6NCS6 295 aa13.28□□□□□ -0.28
RUFY3-215ENST00000515479 RYDENQ9NUL5 291 aaKnown RBP13.28□□□□□ -0.28
RUFY3-215ENST00000515479 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
RUFY3-215ENST00000515479 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
RUFY3-215ENST00000515479 TMC2Q8TDI7 906 aa13.26□□□□□ -0.29
RUFY3-215ENST00000515479 KIF3CO14782 793 aa13.25□□□□□ -0.29
RUFY3-215ENST00000515479 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
RUFY3-215ENST00000515479 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
RUFY3-215ENST00000515479 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
RUFY3-215ENST00000515479 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
RUFY3-215ENST00000515479 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
RUFY3-215ENST00000515479 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
RUFY3-215ENST00000515479 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
RUFY3-215ENST00000515479 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
RUFY3-215ENST00000515479 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
RUFY3-215ENST00000515479 ERBB3P21860 1342 aa13.14□□□□□ -0.31
RUFY3-215ENST00000515479 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
RUFY3-215ENST00000515479 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
RUFY3-215ENST00000515479 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
RUFY3-215ENST00000515479 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
RUFY3-215ENST00000515479 SLC34A2O95436 690 aa13.07□□□□□ -0.32
RUFY3-215ENST00000515479 FOXK1P85037 733 aa13.07□□□□□ -0.32
RUFY3-215ENST00000515479 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
RUFY3-215ENST00000515479 DSG2Q14126 1118 aa13.06□□□□□ -0.32
RUFY3-215ENST00000515479 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
RUFY3-215ENST00000515479 NUDT7P0C024 238 aa13.03□□□□□ -0.32
RUFY3-215ENST00000515479 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
RUFY3-215ENST00000515479 CRISPLD2Q9H0B8 497 aa13.03□□□□□ -0.32
RUFY3-215ENST00000515479 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
RUFY3-215ENST00000515479 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
RUFY3-215ENST00000515479 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
RUFY3-215ENST00000515479 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
RUFY3-215ENST00000515479 PDE4AP27815 886 aa12.98□□□□□ -0.33
RUFY3-215ENST00000515479 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
RUFY3-215ENST00000515479 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
RUFY3-215ENST00000515479 ZNF687Q8N1G0 1237 aa12.95□□□□□ -0.34
RUFY3-215ENST00000515479 SPNS2Q8IVW8 549 aa12.94□□□□□ -0.34
RUFY3-215ENST00000515479 LARP6Q9BRS8 491 aaKnown RBP12.93□□□□□ -0.34
RUFY3-215ENST00000515479 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
RUFY3-215ENST00000515479 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
RUFY3-215ENST00000515479 TBC1D12O60347 775 aa12.92□□□□□ -0.34
RUFY3-215ENST00000515479 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
RUFY3-215ENST00000515479 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
RUFY3-215ENST00000515479 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
RUFY3-215ENST00000515479 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
RUFY3-215ENST00000515479 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
RUFY3-215ENST00000515479 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
RUFY3-215ENST00000515479 MFSD10Q14728 455 aa12.86□□□□□ -0.35
RUFY3-215ENST00000515479 KDM4FA0A1W2PPD8 638 aa12.85□□□□□ -0.35
RUFY3-215ENST00000515479 PSDA5PKW4 1024 aaPredicted RBP12.84□□□□□ -0.35
RUFY3-215ENST00000515479 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
RUFY3-215ENST00000515479 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
RUFY3-215ENST00000515479 PBX2P40425 430 aa12.79□□□□□ -0.36
RUFY3-215ENST00000515479 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
RUFY3-215ENST00000515479 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
RUFY3-215ENST00000515479 LSM11P83369 360 aaKnown RBP eCLIP12.76□□□□□ -0.37
RUFY3-215ENST00000515479 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
RUFY3-215ENST00000515479 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
RUFY3-215ENST00000515479 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
RUFY3-215ENST00000515479 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
RUFY3-215ENST00000515479 EVI5O60447 810 aa12.73□□□□□ -0.37
RUFY3-215ENST00000515479 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
RUFY3-215ENST00000515479 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
RUFY3-215ENST00000515479 MYT1LQ9UL68 1186 aa12.68□□□□□ -0.38
RUFY3-215ENST00000515479 PTGER2P43116 358 aa12.67□□□□□ -0.38
RUFY3-215ENST00000515479 PSEN2P49810 448 aa12.67□□□□□ -0.38
RUFY3-215ENST00000515479 CAMK2BQ13554 666 aa12.67□□□□□ -0.38
RUFY3-215ENST00000515479 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
RUFY3-215ENST00000515479 FOSBP53539 338 aa12.66□□□□□ -0.38
RUFY3-215ENST00000515479 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
RUFY3-215ENST00000515479 KCNH8Q96L42 1107 aa12.66□□□□□ -0.38
RUFY3-215ENST00000515479 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
RUFY3-215ENST00000515479 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
RUFY3-215ENST00000515479 DPYSL4O14531 572 aa12.63□□□□□ -0.39
RUFY3-215ENST00000515479 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
RUFY3-215ENST00000515479 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
RUFY3-215ENST00000515479 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
RUFY3-215ENST00000515479 WDR70Q9NW82 654 aa12.6□□□□□ -0.39
RUFY3-215ENST00000515479 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
RUFY3-215ENST00000515479 TK2O00142 265 aa12.57□□□□□ -0.4
RUFY3-215ENST00000515479 PTPREP23469 700 aa12.57□□□□□ -0.4
RUFY3-215ENST00000515479 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
RUFY3-215ENST00000515479 E2F4Q16254 413 aa12.55□□□□□ -0.4
RUFY3-215ENST00000515479 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
RUFY3-215ENST00000515479 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
RUFY3-215ENST00000515479 PHF14O94880 888 aa12.52□□□□□ -0.41
RUFY3-215ENST00000515479 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
RUFY3-215ENST00000515479 HRO43593 1189 aa12.5□□□□□ -0.41
RUFY3-215ENST00000515479 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
RUFY3-215ENST00000515479 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
RUFY3-215ENST00000515479 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
RUFY3-215ENST00000515479 PDIA6Q15084 440 aa12.48□□□□□ -0.41
RUFY3-215ENST00000515479 DDX12PQ92771 950 aa12.48□□□□□ -0.41
RUFY3-215ENST00000515479 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
RUFY3-215ENST00000515479 EPAS1Q99814 870 aa12.46□□□□□ -0.41
RUFY3-215ENST00000515479 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms