RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 POTEB3A0JP26 581 aa16.27■□□□□ 0.2
CENPE-207ENST00000515478 POTEBQ6S5H4 581 aa16.27■□□□□ 0.2
CENPE-207ENST00000515478 RGL2O15211 777 aa16.26■□□□□ 0.19
CENPE-207ENST00000515478 PKD2Q13563 968 aa16.26■□□□□ 0.19
CENPE-207ENST00000515478 FBXO22Q8NEZ5 403 aa16.26■□□□□ 0.19
CENPE-207ENST00000515478 MMRN1Q13201 1228 aa16.25■□□□□ 0.19
CENPE-207ENST00000515478 MFRPQ9BY79 579 aa16.23■□□□□ 0.19
CENPE-207ENST00000515478 KRTAP3-3Q9BYR6 98 aa16.2■□□□□ 0.18
CENPE-207ENST00000515478 KRTAP3-2Q9BYR7 98 aa16.2■□□□□ 0.18
CENPE-207ENST00000515478 ZSWIM6Q9HCJ5 1215 aa16.2■□□□□ 0.18
CENPE-207ENST00000515478 VARS2Q5ST30 1063 aaKnown RBP16.15■□□□□ 0.18
CENPE-207ENST00000515478 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
CENPE-207ENST00000515478 ARSIQ5FYB1 569 aa16.08■□□□□ 0.16
CENPE-207ENST00000515478 C2orf72A6NCS6 295 aa16.05■□□□□ 0.16
CENPE-207ENST00000515478 TMC2Q8TDI7 906 aa16.04■□□□□ 0.16
CENPE-207ENST00000515478 ZNF687Q8N1G0 1237 aa15.99■□□□□ 0.15
CENPE-207ENST00000515478 KHSRPQ92945 711 aaKnown RBP eCLIP15.99■□□□□ 0.15
CENPE-207ENST00000515478 KIF3CO14782 793 aa15.98■□□□□ 0.15
CENPE-207ENST00000515478 ZNF316A6NFI3 1004 aaPredicted RBP15.95■□□□□ 0.14
CENPE-207ENST00000515478 PPP1R37O75864 691 aa15.94■□□□□ 0.14
CENPE-207ENST00000515478 HS6ST3Q8IZP7 471 aa15.93■□□□□ 0.14
CENPE-207ENST00000515478 CHGAP10645 457 aaKnown RBP15.91■□□□□ 0.14
CENPE-207ENST00000515478 NUDT7P0C024 238 aa15.9■□□□□ 0.14
CENPE-207ENST00000515478 RNF166Q96A37 237 aaPredicted RBP15.87■□□□□ 0.13
CENPE-207ENST00000515478 PCDHGA4Q9Y5G9 962 aa15.87■□□□□ 0.13
CENPE-207ENST00000515478 SLC34A2O95436 690 aa15.85■□□□□ 0.13
CENPE-207ENST00000515478 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
CENPE-207ENST00000515478 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
CENPE-207ENST00000515478 LHX6Q9UPM6 363 aa15.8■□□□□ 0.12
CENPE-207ENST00000515478 PTGER2P43116 358 aa15.78■□□□□ 0.12
CENPE-207ENST00000515478 LSM11P83369 360 aaKnown RBP eCLIP15.75■□□□□ 0.11
CENPE-207ENST00000515478 RYDENQ9NUL5 291 aaKnown RBP15.75■□□□□ 0.11
CENPE-207ENST00000515478 PLPP6Q8IY26 295 aa15.74■□□□□ 0.11
CENPE-207ENST00000515478 PBX2P40425 430 aa15.73■□□□□ 0.11
CENPE-207ENST00000515478 FOXK1P85037 733 aa15.72■□□□□ 0.11
CENPE-207ENST00000515478 GPHNQ9NQX3 736 aaPredicted RBP15.72■□□□□ 0.11
CENPE-207ENST00000515478 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
CENPE-207ENST00000515478 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
CENPE-207ENST00000515478 TBC1D12O60347 775 aa15.68■□□□□ 0.1
CENPE-207ENST00000515478 PTCD2Q8WV60 388 aaKnown RBP15.68■□□□□ 0.1
CENPE-207ENST00000515478 DSG2Q14126 1118 aa15.67■□□□□ 0.1
CENPE-207ENST00000515478 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
CENPE-207ENST00000515478 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
CENPE-207ENST00000515478 DCAF8L2P0C7V8 631 aa15.64■□□□□ 0.09
CENPE-207ENST00000515478 ARHGAP33O14559 1287 aa15.59■□□□□ 0.09
CENPE-207ENST00000515478 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
CENPE-207ENST00000515478 PPP4R3BQ5MIZ7 849 aa15.57■□□□□ 0.08
CENPE-207ENST00000515478 UPF1Q92900 1129 aaKnown RBP eCLIP15.55■□□□□ 0.08
CENPE-207ENST00000515478 KDM4FA0A1W2PPD8 638 aa15.53■□□□□ 0.08
CENPE-207ENST00000515478 PPP1R15BQ5SWA1 713 aa15.52■□□□□ 0.08
CENPE-207ENST00000515478 ADGRD1Q6QNK2 874 aa15.52■□□□□ 0.08
CENPE-207ENST00000515478 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
CENPE-207ENST00000515478 PDE4AP27815 886 aa15.5■□□□□ 0.07
CENPE-207ENST00000515478 CRISPLD2Q9H0B8 497 aa15.5■□□□□ 0.07
CENPE-207ENST00000515478 PSEN2P49810 448 aa15.49■□□□□ 0.07
CENPE-207ENST00000515478 OXER1Q8TDS5 423 aa15.47■□□□□ 0.07
CENPE-207ENST00000515478 STAC3Q96MF2 364 aa15.47■□□□□ 0.07
CENPE-207ENST00000515478 GTPBP6O43824 516 aaPredicted RBP15.44■□□□□ 0.06
CENPE-207ENST00000515478 DMRTA1Q5VZB9 504 aa15.44■□□□□ 0.06
CENPE-207ENST00000515478 TK2O00142 265 aa15.43■□□□□ 0.06
CENPE-207ENST00000515478 KCNK17Q96T54 332 aa15.43■□□□□ 0.06
CENPE-207ENST00000515478 ZNF454Q8N9F8 522 aa15.42■□□□□ 0.06
CENPE-207ENST00000515478 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
CENPE-207ENST00000515478 NCKAP5LQ9HCH0 1330 aa15.41■□□□□ 0.06
CENPE-207ENST00000515478 DDX27Q96GQ7 796 aaKnown RBP15.39■□□□□ 0.05
CENPE-207ENST00000515478 HCSTQ9UBK5 93 aa15.39■□□□□ 0.05
CENPE-207ENST00000515478 HRO43593 1189 aa15.33■□□□□ 0.04
CENPE-207ENST00000515478 MAP3K9P80192 1104 aa15.32■□□□□ 0.04
CENPE-207ENST00000515478 EVI5O60447 810 aa15.31■□□□□ 0.04
CENPE-207ENST00000515478 KCTD12Q96CX2 325 aaKnown RBP15.3■□□□□ 0.04
CENPE-207ENST00000515478 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
CENPE-207ENST00000515478 PTPREP23469 700 aa15.29■□□□□ 0.04
CENPE-207ENST00000515478 FOSBP53539 338 aa15.29■□□□□ 0.04
CENPE-207ENST00000515478 PLA2G2EQ9NZK7 142 aa15.28■□□□□ 0.04
CENPE-207ENST00000515478 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
CENPE-207ENST00000515478 VPS9D1Q9Y2B5 631 aa15.26■□□□□ 0.03
CENPE-207ENST00000515478 MFSD10Q14728 455 aa15.25■□□□□ 0.03
CENPE-207ENST00000515478 ANO8Q9HCE9 1232 aaPredicted RBP15.24■□□□□ 0.03
CENPE-207ENST00000515478 ZDHHC16Q969W1 377 aa15.23■□□□□ 0.03
CENPE-207ENST00000515478 GOLGA8CPA6NN73 597 aa15.2■□□□□ 0.02
CENPE-207ENST00000515478 SLC4A5Q9BY07 1137 aa15.18■□□□□ 0.02
CENPE-207ENST00000515478 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
CENPE-207ENST00000515478 ADAM33Q9BZ11 813 aa15.17■□□□□ 0.02
CENPE-207ENST00000515478 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
CENPE-207ENST00000515478 PTPN5P54829 565 aa15.16■□□□□ 0.02
CENPE-207ENST00000515478 ZBED2Q9BTP6 218 aa15.15■□□□□ 0.02
CENPE-207ENST00000515478 MRPL50Q8N5N7 158 aaKnown RBP15.14■□□□□ 0.01
CENPE-207ENST00000515478 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
CENPE-207ENST00000515478 BBXQ8WY36 941 aaPredicted RBP15.08■□□□□ 0
CENPE-207ENST00000515478 WNT2BQ93097 391 aa15.08■□□□□ 0
CENPE-207ENST00000515478 PCDHGA10Q9Y5H3 936 aa15.08■□□□□ 0
CENPE-207ENST00000515478 BHMG1C9JSJ3 638 aaPredicted RBP15.07■□□□□ 0
CENPE-207ENST00000515478 TYW1BQ6NUM6 668 aa15.07■□□□□ 0
CENPE-207ENST00000515478 FBXW7Q969H0 707 aa15.07■□□□□ 0
CENPE-207ENST00000515478 PPP1R3GB7ZBB8 358 aa15.06■□□□□ 0
CENPE-207ENST00000515478 PHF14O94880 888 aa15.05■□□□□ -0
CENPE-207ENST00000515478 THSD4Q6ZMP0 1018 aa15.05■□□□□ -0
CENPE-207ENST00000515478 DPYSL4O14531 572 aa15.03■□□□□ -0
CENPE-207ENST00000515478 CAMK2BQ13554 666 aa15□□□□□ -0.01
CENPE-207ENST00000515478 PROX2Q3B8N5 592 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms