RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
PAPD4-216ENST00000515298 KIF3CO14782 793 aa11.68□□□□□ -0.54
PAPD4-216ENST00000515298 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
PAPD4-216ENST00000515298 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
PAPD4-216ENST00000515298 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
PAPD4-216ENST00000515298 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
PAPD4-216ENST00000515298 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
PAPD4-216ENST00000515298 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-216ENST00000515298 PDE4AP27815 886 aa11.61□□□□□ -0.55
PAPD4-216ENST00000515298 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
PAPD4-216ENST00000515298 FOXK1P85037 733 aa11.58□□□□□ -0.56
PAPD4-216ENST00000515298 DSG2Q14126 1118 aa11.57□□□□□ -0.56
PAPD4-216ENST00000515298 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
PAPD4-216ENST00000515298 MFSD10Q14728 455 aa11.56□□□□□ -0.56
PAPD4-216ENST00000515298 SNPHO15079 494 aa11.53□□□□□ -0.56
PAPD4-216ENST00000515298 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
PAPD4-216ENST00000515298 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
PAPD4-216ENST00000515298 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
PAPD4-216ENST00000515298 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
PAPD4-216ENST00000515298 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
PAPD4-216ENST00000515298 SLC34A2O95436 690 aa11.46□□□□□ -0.57
PAPD4-216ENST00000515298 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
PAPD4-216ENST00000515298 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
PAPD4-216ENST00000515298 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
PAPD4-216ENST00000515298 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
PAPD4-216ENST00000515298 ST18O60284 1047 aa11.42□□□□□ -0.58
PAPD4-216ENST00000515298 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
PAPD4-216ENST00000515298 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
PAPD4-216ENST00000515298 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
PAPD4-216ENST00000515298 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
PAPD4-216ENST00000515298 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
PAPD4-216ENST00000515298 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
PAPD4-216ENST00000515298 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
PAPD4-216ENST00000515298 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
PAPD4-216ENST00000515298 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
PAPD4-216ENST00000515298 E2F4Q16254 413 aa11.38□□□□□ -0.59
PAPD4-216ENST00000515298 PCDHGA4Q9Y5G9 962 aa11.38□□□□□ -0.59
PAPD4-216ENST00000515298 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
PAPD4-216ENST00000515298 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
PAPD4-216ENST00000515298 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
PAPD4-216ENST00000515298 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.599e-9■■■■■ 28.9
PAPD4-216ENST00000515298 TBC1D12O60347 775 aa11.33□□□□□ -0.6
PAPD4-216ENST00000515298 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
PAPD4-216ENST00000515298 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
PAPD4-216ENST00000515298 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
PAPD4-216ENST00000515298 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-216ENST00000515298 DPYSL4O14531 572 aa11.29□□□□□ -0.6
PAPD4-216ENST00000515298 NUDT7P0C024 238 aa11.29□□□□□ -0.6
PAPD4-216ENST00000515298 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
PAPD4-216ENST00000515298 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
PAPD4-216ENST00000515298 EMP3P54852 163 aa11.26□□□□□ -0.61
PAPD4-216ENST00000515298 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
PAPD4-216ENST00000515298 EVI5O60447 810 aa11.25□□□□□ -0.61
PAPD4-216ENST00000515298 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
PAPD4-216ENST00000515298 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
PAPD4-216ENST00000515298 PDIA6Q15084 440 aa11.22□□□□□ -0.61
PAPD4-216ENST00000515298 LHX6Q9UPM6 363 aa11.22□□□□□ -0.61
PAPD4-216ENST00000515298 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
PAPD4-216ENST00000515298 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
PAPD4-216ENST00000515298 ERBB3P21860 1342 aa11.2□□□□□ -0.62
PAPD4-216ENST00000515298 POTEMA6NI47 508 aa11.2□□□□□ -0.62
PAPD4-216ENST00000515298 SPDYE16A6NNV3 312 aaPredicted RBP11.2□□□□□ -0.62
PAPD4-216ENST00000515298 FAM205CA6NFA0 338 aa11.19□□□□□ -0.62
PAPD4-216ENST00000515298 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
PAPD4-216ENST00000515298 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
PAPD4-216ENST00000515298 VARS2Q5ST30 1063 aaKnown RBP11.17□□□□□ -0.62
PAPD4-216ENST00000515298 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
PAPD4-216ENST00000515298 PTGER2P43116 358 aa11.15□□□□□ -0.62
PAPD4-216ENST00000515298 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
PAPD4-216ENST00000515298 FOSBP53539 338 aa11.12□□□□□ -0.63
PAPD4-216ENST00000515298 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
PAPD4-216ENST00000515298 ZNF454Q8N9F8 522 aa11.1□□□□□ -0.63
PAPD4-216ENST00000515298 PHF14O94880 888 aa11.09□□□□□ -0.63
PAPD4-216ENST00000515298 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
PAPD4-216ENST00000515298 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
PAPD4-216ENST00000515298 DDX12PQ92771 950 aa11.09□□□□□ -0.63
PAPD4-216ENST00000515298 PCDHGA10Q9Y5H3 936 aa11.09□□□□□ -0.63
PAPD4-216ENST00000515298 SEMA3EO15041 775 aa11.08□□□□□ -0.64
PAPD4-216ENST00000515298 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
PAPD4-216ENST00000515298 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
PAPD4-216ENST00000515298 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
PAPD4-216ENST00000515298 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
PAPD4-216ENST00000515298 EPAS1Q99814 870 aa11.05□□□□□ -0.64
PAPD4-216ENST00000515298 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
PAPD4-216ENST00000515298 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
PAPD4-216ENST00000515298 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
PAPD4-216ENST00000515298 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
PAPD4-216ENST00000515298 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
PAPD4-216ENST00000515298 OSBPP22059 807 aa11.02□□□□□ -0.65
PAPD4-216ENST00000515298 NBR1Q14596 966 aa11.02□□□□□ -0.65
PAPD4-216ENST00000515298 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
PAPD4-216ENST00000515298 PBX2P40425 430 aa11□□□□□ -0.65
PAPD4-216ENST00000515298 PRIM1P49642 420 aaKnown RBP11□□□□□ -0.65
PAPD4-216ENST00000515298 PCDH10Q9P2E7 1040 aa11□□□□□ -0.65
PAPD4-216ENST00000515298 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
PAPD4-216ENST00000515298 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
PAPD4-216ENST00000515298 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
PAPD4-216ENST00000515298 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
PAPD4-216ENST00000515298 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
PAPD4-216ENST00000515298 RBM33Q96EV2 1170 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms