RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 MAP3K4Q9Y6R4 1608 aa25.72■■□□□ 1.71
AP3S1-208ENST00000515066 PLCH2O75038 1416 aa25.71■■□□□ 1.71
AP3S1-208ENST00000515066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.69■■□□□ 1.7
AP3S1-208ENST00000515066 CFDP1Q9UEE9 299 aaPredicted RBP25.69■■□□□ 1.7
AP3S1-208ENST00000515066 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
AP3S1-208ENST00000515066 SAMD9LQ8IVG5 1584 aa25.68■■□□□ 1.7
AP3S1-208ENST00000515066 CAMSAP2Q08AD1 1489 aa25.67■■□□□ 1.7
AP3S1-208ENST00000515066 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
AP3S1-208ENST00000515066 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
AP3S1-208ENST00000515066 CD109Q6YHK3 1445 aa25.64■■□□□ 1.7
AP3S1-208ENST00000515066 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
AP3S1-208ENST00000515066 PPRC1Q5VV67 1664 aaKnown RBP25.61■■□□□ 1.69
AP3S1-208ENST00000515066 FAM69CQ0P6D2 419 aa25.6■■□□□ 1.69
AP3S1-208ENST00000515066 FANCAO15360 1455 aa25.6■■□□□ 1.69
AP3S1-208ENST00000515066 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
AP3S1-208ENST00000515066 TSPOAP1O95153 1857 aa25.59■■□□□ 1.69
AP3S1-208ENST00000515066 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.68
AP3S1-208ENST00000515066 ABCC1P33527 1531 aa25.57■■□□□ 1.68
AP3S1-208ENST00000515066 CFAP74Q9C0B2 1584 aa25.56■■□□□ 1.68
AP3S1-208ENST00000515066 SYCP2Q9BX26 1530 aa25.56■■□□□ 1.68
AP3S1-208ENST00000515066 CROCC2H7BZ55 1655 aa25.56■■□□□ 1.68
AP3S1-208ENST00000515066 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
AP3S1-208ENST00000515066 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
AP3S1-208ENST00000515066 ARHGEF5Q12774 1597 aa25.54■■□□□ 1.68
AP3S1-208ENST00000515066 PTPRKQ15262 1439 aa25.53■■□□□ 1.68
AP3S1-208ENST00000515066 ARHGEF12Q9NZN5 1544 aa25.53■■□□□ 1.68
AP3S1-208ENST00000515066 KIAA1107Q9UPP5 1409 aa25.52■■□□□ 1.68
AP3S1-208ENST00000515066 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
AP3S1-208ENST00000515066 DAPK1P53355 1430 aa25.51■■□□□ 1.67
AP3S1-208ENST00000515066 ABCC5O15440 1437 aa25.51■■□□□ 1.67
AP3S1-208ENST00000515066 ITGAEP38570 1179 aa25.48■■□□□ 1.67
AP3S1-208ENST00000515066 NEO1Q92859 1461 aa25.48■■□□□ 1.67
AP3S1-208ENST00000515066 AKNAQ7Z591 1439 aa25.47■■□□□ 1.67
AP3S1-208ENST00000515066 ADGRL1O94910 1474 aa25.47■■□□□ 1.67
AP3S1-208ENST00000515066 HNRNPMP52272 730 aaKnown RBP eCLIP25.45■■□□□ 1.67
AP3S1-208ENST00000515066 CCDC141Q6ZP82 1450 aa25.45■■□□□ 1.66
AP3S1-208ENST00000515066 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
AP3S1-208ENST00000515066 TEX14Q8IWB6 1497 aa25.42■■□□□ 1.66
AP3S1-208ENST00000515066 SHANK2Q9UPX8 1470 aa25.42■■□□□ 1.66
AP3S1-208ENST00000515066 TRAPPC8Q9Y2L5 1435 aa25.42■■□□□ 1.66
AP3S1-208ENST00000515066 SCAPERQ9BY12 1400 aa25.4■■□□□ 1.66
AP3S1-208ENST00000515066 MAST1Q9Y2H9 1570 aa25.39■■□□□ 1.65
AP3S1-208ENST00000515066 RICTORQ6R327 1708 aa25.37■■□□□ 1.65
AP3S1-208ENST00000515066 RSPH4AQ5TD94 716 aa25.36■■□□□ 1.65
AP3S1-208ENST00000515066 C9orf84Q5VXU9 1444 aa25.36■■□□□ 1.65
AP3S1-208ENST00000515066 ADGRL2O95490 1459 aa25.36■■□□□ 1.65
AP3S1-208ENST00000515066 GCC2Q8IWJ2 1684 aa25.35■■□□□ 1.65
AP3S1-208ENST00000515066 POGZQ7Z3K3 1410 aa25.35■■□□□ 1.65
AP3S1-208ENST00000515066 KDM5CP41229 1560 aa25.34■■□□□ 1.65
AP3S1-208ENST00000515066 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
AP3S1-208ENST00000515066 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
AP3S1-208ENST00000515066 ZNF518AQ6AHZ1 1483 aa25.33■■□□□ 1.65
AP3S1-208ENST00000515066 FRMPD1Q5SYB0 1578 aa25.33■■□□□ 1.64
AP3S1-208ENST00000515066 INO80Q9ULG1 1556 aaPredicted RBP25.33■■□□□ 1.64
AP3S1-208ENST00000515066 TRHP20396 242 aaPredicted RBP25.32■■□□□ 1.64
AP3S1-208ENST00000515066 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
AP3S1-208ENST00000515066 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
AP3S1-208ENST00000515066 AFAP1Q8N556 730 aa25.31■■□□□ 1.64
AP3S1-208ENST00000515066 NCOA1Q15788 1441 aa25.31■■□□□ 1.64
AP3S1-208ENST00000515066 DENND4BO75064 1496 aaPredicted RBP25.3■■□□□ 1.64
AP3S1-208ENST00000515066 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
AP3S1-208ENST00000515066 NAIPQ13075 1403 aa25.29■■□□□ 1.64
AP3S1-208ENST00000515066 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
AP3S1-208ENST00000515066 TSPY4P0CV99 314 aa25.28■■□□□ 1.64
AP3S1-208ENST00000515066 TSPY10P0CW01 314 aa25.28■■□□□ 1.64
AP3S1-208ENST00000515066 ATP7AQ04656 1500 aa25.27■■□□□ 1.64
AP3S1-208ENST00000515066 COL17A1Q9UMD9 1497 aaPredicted RBP25.26■■□□□ 1.63
AP3S1-208ENST00000515066 RTEL1-TNFRSF6BF6WH68 1400 aa25.25■■□□□ 1.63
AP3S1-208ENST00000515066 HECW2Q9P2P5 1572 aa25.25■■□□□ 1.63
AP3S1-208ENST00000515066 RRP7BPQ9NSQ0 103 aa25.25■■□□□ 1.63
AP3S1-208ENST00000515066 ANKRD30AQ9BXX3 1397 aa25.25■■□□□ 1.63
AP3S1-208ENST00000515066 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
AP3S1-208ENST00000515066 KDM6BO15054 1643 aa25.24■■□□□ 1.63
AP3S1-208ENST00000515066 RAPGEF3O95398 923 aa25.23■■□□□ 1.63
AP3S1-208ENST00000515066 ZMYM4Q5VZL5 1548 aa25.23■■□□□ 1.63
AP3S1-208ENST00000515066 SPAG9O60271 1321 aaKnown RBP25.23■■□□□ 1.63
AP3S1-208ENST00000515066 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
AP3S1-208ENST00000515066 RAB3GAP2Q9H2M9 1393 aa25.21■■□□□ 1.63
AP3S1-208ENST00000515066 KIF15Q9NS87 1388 aa25.19■■□□□ 1.62
AP3S1-208ENST00000515066 ABCA6Q8N139 1617 aa25.17■■□□□ 1.62
AP3S1-208ENST00000515066 DUOX2Q9NRD8 1548 aa25.14■■□□□ 1.61
AP3S1-208ENST00000515066 ANKRD50Q9ULJ7 1429 aa25.13■■□□□ 1.61
AP3S1-208ENST00000515066 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
AP3S1-208ENST00000515066 YEATS2Q9ULM3 1422 aa25.1■■□□□ 1.61
AP3S1-208ENST00000515066 MAGI2Q86UL8 1455 aa25.1■■□□□ 1.61
AP3S1-208ENST00000515066 HRCP23327 699 aa25.09■■□□□ 1.61
AP3S1-208ENST00000515066 ERBINQ96RT1 1412 aa25.08■■□□□ 1.6
AP3S1-208ENST00000515066 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
AP3S1-208ENST00000515066 EIF2AK4Q9P2K8 1649 aaKnown RBP25.05■■□□□ 1.6
AP3S1-208ENST00000515066 MYT1LQ9UL68 1186 aa25.04■■□□□ 1.6
AP3S1-208ENST00000515066 A2MP01023 1474 aa25.03■■□□□ 1.6
AP3S1-208ENST00000515066 DHX29Q7Z478 1369 aaKnown RBP25.02■■□□□ 1.6
AP3S1-208ENST00000515066 UNC13BO14795 1591 aa25.02■■□□□ 1.6
AP3S1-208ENST00000515066 BCORL1Q5H9F3 1711 aa25.01■■□□□ 1.59
AP3S1-208ENST00000515066 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
AP3S1-208ENST00000515066 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
AP3S1-208ENST00000515066 SIGLEC1Q9BZZ2 1709 aa24.99■■□□□ 1.59
AP3S1-208ENST00000515066 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
AP3S1-208ENST00000515066 ATP10AO60312 1499 aa24.96■■□□□ 1.59
AP3S1-208ENST00000515066 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms