RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 SCAPERQ9BY12 1400 aa28.58■■■□□ 2.17
SIL1-215ENST00000515008 ARHGAP5Q13017 1502 aa28.56■■■□□ 2.16
SIL1-215ENST00000515008 ZFYVE16Q7Z3T8 1539 aa28.55■■■□□ 2.16
SIL1-215ENST00000515008 ADAMTSL3P82987 1691 aa28.54■■■□□ 2.16
SIL1-215ENST00000515008 BCORL1Q5H9F3 1711 aa28.53■■■□□ 2.16
SIL1-215ENST00000515008 PREX2Q70Z35 1606 aa28.52■■■□□ 2.16
SIL1-215ENST00000515008 CDC42BPBQ9Y5S2 1711 aa28.5■■■□□ 2.15
SIL1-215ENST00000515008 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
SIL1-215ENST00000515008 ZNF518AQ6AHZ1 1483 aa28.48■■■□□ 2.15
SIL1-215ENST00000515008 YEATS2Q9ULM3 1422 aa28.47■■■□□ 2.15
SIL1-215ENST00000515008 ARID4BQ4LE39 1312 aaPredicted RBP28.46■■■□□ 2.15
SIL1-215ENST00000515008 KDM5CP41229 1560 aa28.44■■■□□ 2.14
SIL1-215ENST00000515008 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
SIL1-215ENST00000515008 MADDQ8WXG6 1647 aa28.42■■■□□ 2.14
SIL1-215ENST00000515008 PTPRMP28827 1452 aa28.41■■■□□ 2.14
SIL1-215ENST00000515008 ABCC1P33527 1531 aa28.41■■■□□ 2.14
SIL1-215ENST00000515008 HECW2Q9P2P5 1572 aa28.4■■■□□ 2.14
SIL1-215ENST00000515008 ATP10AO60312 1499 aa28.38■■■□□ 2.13
SIL1-215ENST00000515008 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
SIL1-215ENST00000515008 SIGLEC1Q9BZZ2 1709 aa28.37■■■□□ 2.13
SIL1-215ENST00000515008 ITSN2Q9NZM3 1697 aa28.36■■■□□ 2.13
SIL1-215ENST00000515008 MTUS2Q5JR59 1369 aa28.35■■■□□ 2.13
SIL1-215ENST00000515008 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
SIL1-215ENST00000515008 GPATCH8Q9UKJ3 1502 aaKnown RBP28.33■■■□□ 2.13
SIL1-215ENST00000515008 AFAP1Q8N556 730 aa28.32■■■□□ 2.12
SIL1-215ENST00000515008 MLH3Q9UHC1 1453 aa28.32■■■□□ 2.12
SIL1-215ENST00000515008 RIMS1Q86UR5 1692 aaKnown RBP28.32■■■□□ 2.12
SIL1-215ENST00000515008 ARHGEF12Q9NZN5 1544 aa28.31■■■□□ 2.12
SIL1-215ENST00000515008 REREQ9P2R6 1566 aa28.29■■■□□ 2.12
SIL1-215ENST00000515008 SAMD9LQ8IVG5 1584 aa28.28■■■□□ 2.12
SIL1-215ENST00000515008 DIP2CQ9Y2E4 1556 aa28.28■■■□□ 2.12
SIL1-215ENST00000515008 TRAPPC8Q9Y2L5 1435 aa28.28■■■□□ 2.12
SIL1-215ENST00000515008 CCNB3Q8WWL7 1395 aa28.27■■■□□ 2.12
SIL1-215ENST00000515008 FER1L4A9Z1Z3 1794 aa28.25■■■□□ 2.11
SIL1-215ENST00000515008 PLEKHH2Q8IVE3 1493 aa28.25■■■□□ 2.11
SIL1-215ENST00000515008 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
SIL1-215ENST00000515008 SYCP2Q9BX26 1530 aa28.23■■■□□ 2.11
SIL1-215ENST00000515008 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
SIL1-215ENST00000515008 KIAA1107Q9UPP5 1409 aa28.22■■■□□ 2.11
SIL1-215ENST00000515008 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
SIL1-215ENST00000515008 VPS8Q8N3P4 1428 aa28.2■■■□□ 2.11
SIL1-215ENST00000515008 KIDINS220Q9ULH0 1771 aa28.2■■■□□ 2.11
SIL1-215ENST00000515008 LOC105371045A0A1W2PR82 267 aa28.2■■■□□ 2.1
SIL1-215ENST00000515008 CFDP1Q9UEE9 299 aaPredicted RBP28.2■■■□□ 2.1
SIL1-215ENST00000515008 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
SIL1-215ENST00000515008 AGLP35573 1532 aa28.18■■■□□ 2.1
SIL1-215ENST00000515008 MLECQ14165 292 aa28.17■■■□□ 2.1
SIL1-215ENST00000515008 SUPT6HQ7KZ85 1726 aaKnown RBP28.15■■■□□ 2.1
SIL1-215ENST00000515008 LMTK3Q96Q04 1460 aa28.11■■■□□ 2.09
SIL1-215ENST00000515008 INO80Q9ULG1 1556 aaPredicted RBP28.1■■■□□ 2.09
SIL1-215ENST00000515008 SPAG9O60271 1321 aaKnown RBP28.1■■■□□ 2.09
SIL1-215ENST00000515008 NCOA2Q15596 1464 aa28.09■■■□□ 2.09
SIL1-215ENST00000515008 ATP7AQ04656 1500 aa28.09■■■□□ 2.09
SIL1-215ENST00000515008 HNRNPMP52272 730 aaKnown RBP eCLIP28.09■■■□□ 2.093e-7■■■■■ 27.5
SIL1-215ENST00000515008 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
SIL1-215ENST00000515008 LRRC9Q6ZRR7 1453 aa28.04■■■□□ 2.08
SIL1-215ENST00000515008 MBD5Q9P267 1494 aa28.03■■■□□ 2.08
SIL1-215ENST00000515008 PLXNC1O60486 1568 aa28■■■□□ 2.07
SIL1-215ENST00000515008 PLPPR3Q6T4P5 718 aa28■■■□□ 2.07
SIL1-215ENST00000515008 ZNF644Q9H582 1327 aaPredicted RBP27.99■■■□□ 2.07
SIL1-215ENST00000515008 CNTLNQ9NXG0 1405 aa27.98■■■□□ 2.07
SIL1-215ENST00000515008 ADGBQ8N7X0 1667 aa27.97■■■□□ 2.07
SIL1-215ENST00000515008 PREX1Q8TCU6 1659 aa27.97■■■□□ 2.07
SIL1-215ENST00000515008 A2MP01023 1474 aa27.97■■■□□ 2.07
SIL1-215ENST00000515008 CAMSAP2Q08AD1 1489 aa27.97■■■□□ 2.07
SIL1-215ENST00000515008 RTEL1-TNFRSF6BF6WH68 1400 aa27.97■■■□□ 2.07
SIL1-215ENST00000515008 ESF1Q9H501 851 aaKnown RBP27.95■■■□□ 2.06
SIL1-215ENST00000515008 CCDC141Q6ZP82 1450 aa27.95■■■□□ 2.06
SIL1-215ENST00000515008 SETD1BQ9UPS6 1966 aaKnown RBP27.94■■■□□ 2.06
SIL1-215ENST00000515008 C3P01024 1663 aa27.94■■■□□ 2.06
SIL1-215ENST00000515008 RSPH4AQ5TD94 716 aa27.92■■■□□ 2.06
SIL1-215ENST00000515008 MROH2AA6NES4 1674 aa27.91■■■□□ 2.06
SIL1-215ENST00000515008 CEBPAP49715 358 aaPredicted RBP27.91■■■□□ 2.06
SIL1-215ENST00000515008 ARHGEF5Q12774 1597 aa27.9■■■□□ 2.06
SIL1-215ENST00000515008 UHRF1BP1Q6BDS2 1440 aa27.86■■■□□ 2.05
SIL1-215ENST00000515008 HSPA2P54652 639 aa27.86■■■□□ 2.05
SIL1-215ENST00000515008 KANK4Q5T7N3 995 aaPredicted RBP27.85■■■□□ 2.05
SIL1-215ENST00000515008 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
SIL1-215ENST00000515008 MYOM3Q5VTT5 1437 aa27.84■■■□□ 2.05
SIL1-215ENST00000515008 DHX29Q7Z478 1369 aaKnown RBP27.82■■■□□ 2.04
SIL1-215ENST00000515008 APLP2Q06481 763 aa27.81■■■□□ 2.04
SIL1-215ENST00000515008 PPP6R1Q9UPN7 881 aa27.81■■■□□ 2.04
SIL1-215ENST00000515008 NPATQ14207 1427 aa27.8■■■□□ 2.04
SIL1-215ENST00000515008 CLTCQ00610 1675 aaKnown RBP27.79■■■□□ 2.04
SIL1-215ENST00000515008 MAST1Q9Y2H9 1570 aa27.77■■■□□ 2.04
SIL1-215ENST00000515008 ZMYM3Q14202 1370 aa27.76■■■□□ 2.03
SIL1-215ENST00000515008 TSPY4P0CV99 314 aa27.76■■■□□ 2.03
SIL1-215ENST00000515008 TSPY10P0CW01 314 aa27.76■■■□□ 2.03
SIL1-215ENST00000515008 FAM135AQ9P2D6 1515 aa27.76■■■□□ 2.03
SIL1-215ENST00000515008 GGT6Q6P531 493 aa27.74■■■□□ 2.03
SIL1-215ENST00000515008 ILDR1Q86SU0 546 aaPredicted RBP27.73■■■□□ 2.03
SIL1-215ENST00000515008 STRCQ7RTU9 1775 aa27.67■■■□□ 2.02
SIL1-215ENST00000515008 PTPRKQ15262 1439 aa27.67■■■□□ 2.02
SIL1-215ENST00000515008 KIF3BO15066 747 aa27.66■■■□□ 2.02
SIL1-215ENST00000515008 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
SIL1-215ENST00000515008 KDM5DQ9BY66 1539 aa27.66■■■□□ 2.02
SIL1-215ENST00000515008 DMRT2Q9Y5R5 561 aa27.64■■■□□ 2.02
SIL1-215ENST00000515008 ZNF142P52746 1687 aaPredicted RBP27.64■■■□□ 2.02
SIL1-215ENST00000515008 SHANK2Q9UPX8 1470 aa27.64■■■□□ 2.01
SIL1-215ENST00000515008 MYO3AQ8NEV4 1616 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms