RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
GYPA-210ENST00000514603 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
GYPA-210ENST00000514603 G3V3G9 751 aa11.04□□□□□ -0.64
GYPA-210ENST00000514603 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
GYPA-210ENST00000514603 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
GYPA-210ENST00000514603 TMEM121BQ9BXQ6 578 aaPredicted RBP11.02□□□□□ -0.65
GYPA-210ENST00000514603 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
GYPA-210ENST00000514603 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
GYPA-210ENST00000514603 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
GYPA-210ENST00000514603 LARP6Q9BRS8 491 aaKnown RBP10.95□□□□□ -0.66
GYPA-210ENST00000514603 PDE4AP27815 886 aa10.94□□□□□ -0.66
GYPA-210ENST00000514603 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
GYPA-210ENST00000514603 WDR70Q9NW82 654 aa10.93□□□□□ -0.66
GYPA-210ENST00000514603 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
GYPA-210ENST00000514603 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
GYPA-210ENST00000514603 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
GYPA-210ENST00000514603 MFSD10Q14728 455 aa10.9□□□□□ -0.66
GYPA-210ENST00000514603 MAMSTRQ6ZN01 415 aa10.9□□□□□ -0.66
GYPA-210ENST00000514603 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.66
GYPA-210ENST00000514603 C2orf72A6NCS6 295 aa10.89□□□□□ -0.67
GYPA-210ENST00000514603 KIF3CO14782 793 aa10.87□□□□□ -0.67
GYPA-210ENST00000514603 DSG2Q14126 1118 aa10.86□□□□□ -0.67
GYPA-210ENST00000514603 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
GYPA-210ENST00000514603 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
GYPA-210ENST00000514603 KCNV2Q8TDN2 545 aa10.84□□□□□ -0.67
GYPA-210ENST00000514603 FOXK1P85037 733 aa10.83□□□□□ -0.68
GYPA-210ENST00000514603 E2F4Q16254 413 aa10.83□□□□□ -0.68
GYPA-210ENST00000514603 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
GYPA-210ENST00000514603 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
GYPA-210ENST00000514603 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
GYPA-210ENST00000514603 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
GYPA-210ENST00000514603 CAMK2BQ13554 666 aa10.78□□□□□ -0.68
GYPA-210ENST00000514603 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
GYPA-210ENST00000514603 BCANQ96GW7 911 aa10.74□□□□□ -0.69
GYPA-210ENST00000514603 EMILIN3Q9NT22 766 aa10.74□□□□□ -0.69
GYPA-210ENST00000514603 NBR1Q14596 966 aa10.72□□□□□ -0.69
GYPA-210ENST00000514603 SPNS2Q8IVW8 549 aa10.72□□□□□ -0.69
GYPA-210ENST00000514603 ARHGEF1Q92888 912 aaKnown RBP10.72□□□□□ -0.69
GYPA-210ENST00000514603 UPF1Q92900 1129 aaKnown RBP eCLIP10.7□□□□□ -0.7
GYPA-210ENST00000514603 DPYSL4O14531 572 aa10.69□□□□□ -0.7
GYPA-210ENST00000514603 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
GYPA-210ENST00000514603 OXER1Q8TDS5 423 aa10.66□□□□□ -0.7
GYPA-210ENST00000514603 SLC34A2O95436 690 aa10.63□□□□□ -0.71
GYPA-210ENST00000514603 HOXB3P14651 431 aaPredicted RBP10.63□□□□□ -0.71
GYPA-210ENST00000514603 MAP3K9P80192 1104 aa10.63□□□□□ -0.71
GYPA-210ENST00000514603 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
GYPA-210ENST00000514603 SEMA3EO15041 775 aa10.61□□□□□ -0.71
GYPA-210ENST00000514603 PDIA6Q15084 440 aa10.6□□□□□ -0.71
GYPA-210ENST00000514603 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
GYPA-210ENST00000514603 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
GYPA-210ENST00000514603 TBC1D12O60347 775 aa10.58□□□□□ -0.72
GYPA-210ENST00000514603 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
GYPA-210ENST00000514603 ST18O60284 1047 aa10.57□□□□□ -0.72
GYPA-210ENST00000514603 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
GYPA-210ENST00000514603 TESPA1A2RU30 521 aaPredicted RBP10.55□□□□□ -0.72
GYPA-210ENST00000514603 SNPHO15079 494 aa10.55□□□□□ -0.72
GYPA-210ENST00000514603 EVI5O60447 810 aa10.55□□□□□ -0.72
GYPA-210ENST00000514603 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
GYPA-210ENST00000514603 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
GYPA-210ENST00000514603 KHSRPQ92945 711 aaKnown RBP eCLIP10.54□□□□□ -0.721e-7■□□□□ 8.2
GYPA-210ENST00000514603 MLLT3P42568 568 aaPredicted RBP10.53□□□□□ -0.72
GYPA-210ENST00000514603 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
GYPA-210ENST00000514603 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
GYPA-210ENST00000514603 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
GYPA-210ENST00000514603 NUDT7P0C024 238 aa10.5□□□□□ -0.73
GYPA-210ENST00000514603 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
GYPA-210ENST00000514603 DDX12PQ92771 950 aa10.49□□□□□ -0.73
GYPA-210ENST00000514603 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
GYPA-210ENST00000514603 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
GYPA-210ENST00000514603 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
GYPA-210ENST00000514603 PTGER2P43116 358 aa10.46□□□□□ -0.73
GYPA-210ENST00000514603 SMYD5Q6GMV2 418 aa10.46□□□□□ -0.73
GYPA-210ENST00000514603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.46□□□□□ -0.73
GYPA-210ENST00000514603 HOXB1P14653 301 aaPredicted RBP10.45□□□□□ -0.74
GYPA-210ENST00000514603 LMOD2Q6P5Q4 547 aa10.45□□□□□ -0.74
GYPA-210ENST00000514603 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
GYPA-210ENST00000514603 OSBPP22059 807 aa10.41□□□□□ -0.74
GYPA-210ENST00000514603 LHX6Q9UPM6 363 aa10.41□□□□□ -0.74
GYPA-210ENST00000514603 PHF14O94880 888 aa10.39□□□□□ -0.75
GYPA-210ENST00000514603 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
GYPA-210ENST00000514603 JPH4Q96JJ6 628 aa10.39□□□□□ -0.75
GYPA-210ENST00000514603 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
GYPA-210ENST00000514603 FOSBP53539 338 aa10.38□□□□□ -0.75
GYPA-210ENST00000514603 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
GYPA-210ENST00000514603 ZNF454Q8N9F8 522 aa10.38□□□□□ -0.75
GYPA-210ENST00000514603 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
GYPA-210ENST00000514603 EPAS1Q99814 870 aa10.36□□□□□ -0.75
GYPA-210ENST00000514603 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
GYPA-210ENST00000514603 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
GYPA-210ENST00000514603 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
GYPA-210ENST00000514603 EMP3P54852 163 aa10.34□□□□□ -0.75
GYPA-210ENST00000514603 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
GYPA-210ENST00000514603 MAP3K7O43318 606 aa10.33□□□□□ -0.76
GYPA-210ENST00000514603 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
GYPA-210ENST00000514603 FBXW7Q969H0 707 aa10.33□□□□□ -0.76
GYPA-210ENST00000514603 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
GYPA-210ENST00000514603 PSDA5PKW4 1024 aaPredicted RBP10.32□□□□□ -0.76
GYPA-210ENST00000514603 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
GYPA-210ENST00000514603 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
GYPA-210ENST00000514603 ERBB3P21860 1342 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms