RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 TMEM121BQ9BXQ6 578 aaPredicted RBP14.19□□□□□ -0.14
PDE4D-222ENST00000514552 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
PDE4D-222ENST00000514552 UNC13AQ9UPW8 1703 aa14.11□□□□□ -0.15
PDE4D-222ENST00000514552 PDE4AP27815 886 aa14.09□□□□□ -0.15
PDE4D-222ENST00000514552 CRISPLD2Q9H0B8 497 aa14.09□□□□□ -0.15
PDE4D-222ENST00000514552 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
PDE4D-222ENST00000514552 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
PDE4D-222ENST00000514552 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
PDE4D-222ENST00000514552 C3orf67Q6ZVT6 689 aa14.05□□□□□ -0.16
PDE4D-222ENST00000514552 WDR70Q9NW82 654 aa14.05□□□□□ -0.16
PDE4D-222ENST00000514552 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
PDE4D-222ENST00000514552 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
PDE4D-222ENST00000514552 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
PDE4D-222ENST00000514552 POTEB2H3BUK9 544 aa14.02□□□□□ -0.17
PDE4D-222ENST00000514552 TMC2Q8TDI7 906 aa14.02□□□□□ -0.17
PDE4D-222ENST00000514552 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
PDE4D-222ENST00000514552 MFSD10Q14728 455 aa14.01□□□□□ -0.17
PDE4D-222ENST00000514552 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
PDE4D-222ENST00000514552 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.99□□□□□ -0.17
PDE4D-222ENST00000514552 KIF3CO14782 793 aa13.98□□□□□ -0.17
PDE4D-222ENST00000514552 DDX27Q96GQ7 796 aaKnown RBP13.98□□□□□ -0.17
PDE4D-222ENST00000514552 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
PDE4D-222ENST00000514552 C2orf72A6NCS6 295 aa13.96□□□□□ -0.17
PDE4D-222ENST00000514552 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
PDE4D-222ENST00000514552 FOXK1P85037 733 aa13.94□□□□□ -0.18
PDE4D-222ENST00000514552 PPP1R15BQ5SWA1 713 aa13.93□□□□□ -0.18
PDE4D-222ENST00000514552 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
PDE4D-222ENST00000514552 DSG2Q14126 1118 aa13.91□□□□□ -0.18
PDE4D-222ENST00000514552 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
PDE4D-222ENST00000514552 E2F4Q16254 413 aa13.9□□□□□ -0.18
PDE4D-222ENST00000514552 CAMK2BQ13554 666 aa13.86□□□□□ -0.19
PDE4D-222ENST00000514552 PLPP6Q8IY26 295 aa13.86□□□□□ -0.19
PDE4D-222ENST00000514552 LHX8Q68G74 356 aa13.85□□□□□ -0.19
PDE4D-222ENST00000514552 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
PDE4D-222ENST00000514552 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
PDE4D-222ENST00000514552 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
PDE4D-222ENST00000514552 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
PDE4D-222ENST00000514552 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
PDE4D-222ENST00000514552 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
PDE4D-222ENST00000514552 BCANQ96GW7 911 aa13.75□□□□□ -0.21
PDE4D-222ENST00000514552 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
PDE4D-222ENST00000514552 SLC34A2O95436 690 aa13.73□□□□□ -0.21
PDE4D-222ENST00000514552 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
PDE4D-222ENST00000514552 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
PDE4D-222ENST00000514552 NBR1Q14596 966 aa13.71□□□□□ -0.21
PDE4D-222ENST00000514552 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
PDE4D-222ENST00000514552 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
PDE4D-222ENST00000514552 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
PDE4D-222ENST00000514552 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
PDE4D-222ENST00000514552 DPYSL4O14531 572 aa13.66□□□□□ -0.22
PDE4D-222ENST00000514552 SNPHO15079 494 aa13.66□□□□□ -0.22
PDE4D-222ENST00000514552 TBC1D12O60347 775 aa13.65□□□□□ -0.22
PDE4D-222ENST00000514552 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
PDE4D-222ENST00000514552 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDE4D-222ENST00000514552 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
PDE4D-222ENST00000514552 SPDYE16A6NNV3 312 aaPredicted RBP13.63□□□□□ -0.23
PDE4D-222ENST00000514552 RIMBP2O15034 1052 aa13.62□□□□□ -0.23
PDE4D-222ENST00000514552 PDIA6Q15084 440 aa13.61□□□□□ -0.23
PDE4D-222ENST00000514552 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
PDE4D-222ENST00000514552 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
PDE4D-222ENST00000514552 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
PDE4D-222ENST00000514552 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
PDE4D-222ENST00000514552 SEMA3EO15041 775 aa13.55□□□□□ -0.24
PDE4D-222ENST00000514552 EVI5O60447 810 aa13.54□□□□□ -0.24
PDE4D-222ENST00000514552 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
PDE4D-222ENST00000514552 GPR153Q6NV75 609 aa13.52□□□□□ -0.25
PDE4D-222ENST00000514552 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
PDE4D-222ENST00000514552 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
PDE4D-222ENST00000514552 KDM4FA0A1W2PPD8 638 aa13.49□□□□□ -0.25
PDE4D-222ENST00000514552 PTGER2P43116 358 aa13.49□□□□□ -0.25
PDE4D-222ENST00000514552 SMYD5Q6GMV2 418 aa13.48□□□□□ -0.25
PDE4D-222ENST00000514552 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
PDE4D-222ENST00000514552 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
PDE4D-222ENST00000514552 NUDT7P0C024 238 aa13.45□□□□□ -0.26
PDE4D-222ENST00000514552 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDE4D-222ENST00000514552 MLLT3P42568 568 aaPredicted RBP13.44□□□□□ -0.26
PDE4D-222ENST00000514552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDE4D-222ENST00000514552 DDX12PQ92771 950 aa13.4□□□□□ -0.26
PDE4D-222ENST00000514552 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
PDE4D-222ENST00000514552 ST18O60284 1047 aa13.38□□□□□ -0.27
PDE4D-222ENST00000514552 PHF14O94880 888 aa13.37□□□□□ -0.27
PDE4D-222ENST00000514552 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
PDE4D-222ENST00000514552 EPAS1Q99814 870 aa13.37□□□□□ -0.27
PDE4D-222ENST00000514552 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
PDE4D-222ENST00000514552 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
PDE4D-222ENST00000514552 FOSBP53539 338 aa13.35□□□□□ -0.27
PDE4D-222ENST00000514552 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
PDE4D-222ENST00000514552 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
PDE4D-222ENST00000514552 OSBPP22059 807 aa13.34□□□□□ -0.27
PDE4D-222ENST00000514552 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
PDE4D-222ENST00000514552 TYW1BQ6NUM6 668 aa13.32□□□□□ -0.28
PDE4D-222ENST00000514552 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
PDE4D-222ENST00000514552 ZNF454Q8N9F8 522 aa13.31□□□□□ -0.28
PDE4D-222ENST00000514552 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
PDE4D-222ENST00000514552 RBM26Q5T8P6 1007 aaKnown RBP13.29□□□□□ -0.28
PDE4D-222ENST00000514552 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
PDE4D-222ENST00000514552 ZDHHC16Q969W1 377 aa13.28□□□□□ -0.28
PDE4D-222ENST00000514552 EMP3P54852 163 aa13.27□□□□□ -0.29
PDE4D-222ENST00000514552 EN1Q05925 392 aaPredicted RBP13.27□□□□□ -0.29
PDE4D-222ENST00000514552 LCE2DQ5TA82 110 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms