RNA–Protein interactions for RNA: ENST00000514494.1

PPARGC1A-213, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-213ENST00000514494 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
PPARGC1A-213ENST00000514494 PAXIP1Q6ZW49 1069 aaPredicted RBP14.01□□□□□ -0.17
PPARGC1A-213ENST00000514494 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
PPARGC1A-213ENST00000514494 CFAP44Q96MT7 982 aa14.01□□□□□ -0.17
PPARGC1A-213ENST00000514494 ST18O60284 1047 aa14□□□□□ -0.17
PPARGC1A-213ENST00000514494 DOK7Q18PE1 504 aa14□□□□□ -0.17
PPARGC1A-213ENST00000514494 RIMBP2O15034 1052 aa13.98□□□□□ -0.17
PPARGC1A-213ENST00000514494 KIF3CO14782 793 aa13.97□□□□□ -0.17
PPARGC1A-213ENST00000514494 LCE2DQ5TA82 110 aaPredicted RBP13.96□□□□□ -0.17
PPARGC1A-213ENST00000514494 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
PPARGC1A-213ENST00000514494 POTEMA6NI47 508 aa13.93□□□□□ -0.18
PPARGC1A-213ENST00000514494 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
PPARGC1A-213ENST00000514494 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
PPARGC1A-213ENST00000514494 PDE4AP27815 886 aa13.9□□□□□ -0.18
PPARGC1A-213ENST00000514494 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
PPARGC1A-213ENST00000514494 FOXK1P85037 733 aa13.87□□□□□ -0.19
PPARGC1A-213ENST00000514494 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
PPARGC1A-213ENST00000514494 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
PPARGC1A-213ENST00000514494 EMP3P54852 163 aa13.86□□□□□ -0.19
PPARGC1A-213ENST00000514494 DSG2Q14126 1118 aa13.86□□□□□ -0.19
PPARGC1A-213ENST00000514494 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
PPARGC1A-213ENST00000514494 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
PPARGC1A-213ENST00000514494 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
PPARGC1A-213ENST00000514494 CADPS2Q86UW7 1296 aa13.83□□□□□ -0.2
PPARGC1A-213ENST00000514494 HOXB1P14653 301 aaPredicted RBP13.82□□□□□ -0.2
PPARGC1A-213ENST00000514494 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
PPARGC1A-213ENST00000514494 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
PPARGC1A-213ENST00000514494 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
PPARGC1A-213ENST00000514494 SLC34A2O95436 690 aa13.78□□□□□ -0.2
PPARGC1A-213ENST00000514494 GPR153Q6NV75 609 aa13.77□□□□□ -0.21
PPARGC1A-213ENST00000514494 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
PPARGC1A-213ENST00000514494 PCDHGA4Q9Y5G9 962 aa13.75□□□□□ -0.21
PPARGC1A-213ENST00000514494 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.21
PPARGC1A-213ENST00000514494 ERBB3P21860 1342 aa13.73□□□□□ -0.21
PPARGC1A-213ENST00000514494 UPF1Q92900 1129 aaKnown RBP eCLIP13.73□□□□□ -0.21
PPARGC1A-213ENST00000514494 MFSD10Q14728 455 aa13.72□□□□□ -0.21
PPARGC1A-213ENST00000514494 TBC1D12O60347 775 aa13.71□□□□□ -0.21
PPARGC1A-213ENST00000514494 NUDT7P0C024 238 aa13.71□□□□□ -0.21
PPARGC1A-213ENST00000514494 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
PPARGC1A-213ENST00000514494 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
PPARGC1A-213ENST00000514494 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
PPARGC1A-213ENST00000514494 CDAN1Q8IWY9 1227 aa13.67□□□□□ -0.22
PPARGC1A-213ENST00000514494 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
PPARGC1A-213ENST00000514494 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
PPARGC1A-213ENST00000514494 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
PPARGC1A-213ENST00000514494 WDR70Q9NW82 654 aa13.65□□□□□ -0.22
PPARGC1A-213ENST00000514494 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
PPARGC1A-213ENST00000514494 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
PPARGC1A-213ENST00000514494 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
PPARGC1A-213ENST00000514494 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
PPARGC1A-213ENST00000514494 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
PPARGC1A-213ENST00000514494 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
PPARGC1A-213ENST00000514494 EMILIN3Q9NT22 766 aa13.57□□□□□ -0.24
PPARGC1A-213ENST00000514494 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
PPARGC1A-213ENST00000514494 CAMK2BQ13554 666 aa13.53□□□□□ -0.24
PPARGC1A-213ENST00000514494 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
PPARGC1A-213ENST00000514494 EVI5O60447 810 aa13.52□□□□□ -0.25
PPARGC1A-213ENST00000514494 E2F4Q16254 413 aa13.52□□□□□ -0.25
PPARGC1A-213ENST00000514494 DPYSL4O14531 572 aa13.51□□□□□ -0.25
PPARGC1A-213ENST00000514494 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
PPARGC1A-213ENST00000514494 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
PPARGC1A-213ENST00000514494 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
PPARGC1A-213ENST00000514494 ZNF454Q8N9F8 522 aa13.45□□□□□ -0.26
PPARGC1A-213ENST00000514494 KRTAP3-3Q9BYR6 98 aa13.44□□□□□ -0.26
PPARGC1A-213ENST00000514494 KRTAP3-2Q9BYR7 98 aa13.44□□□□□ -0.26
PPARGC1A-213ENST00000514494 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
PPARGC1A-213ENST00000514494 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
PPARGC1A-213ENST00000514494 PBX2P40425 430 aa13.39□□□□□ -0.27
PPARGC1A-213ENST00000514494 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
PPARGC1A-213ENST00000514494 FOSBP53539 338 aa13.38□□□□□ -0.27
PPARGC1A-213ENST00000514494 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
PPARGC1A-213ENST00000514494 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
PPARGC1A-213ENST00000514494 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
PPARGC1A-213ENST00000514494 PDIA6Q15084 440 aa13.35□□□□□ -0.27
PPARGC1A-213ENST00000514494 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
PPARGC1A-213ENST00000514494 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
PPARGC1A-213ENST00000514494 LSM11P83369 360 aaKnown RBP eCLIP13.33□□□□□ -0.28
PPARGC1A-213ENST00000514494 ZDHHC16Q969W1 377 aa13.33□□□□□ -0.28
PPARGC1A-213ENST00000514494 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
PPARGC1A-213ENST00000514494 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
PPARGC1A-213ENST00000514494 DDX12PQ92771 950 aa13.32□□□□□ -0.28
PPARGC1A-213ENST00000514494 KCNK17Q96T54 332 aa13.32□□□□□ -0.28
PPARGC1A-213ENST00000514494 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
PPARGC1A-213ENST00000514494 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
PPARGC1A-213ENST00000514494 PCDHGA10Q9Y5H3 936 aa13.31□□□□□ -0.28
PPARGC1A-213ENST00000514494 PHF14O94880 888 aa13.3□□□□□ -0.28
PPARGC1A-213ENST00000514494 PSEN2P49810 448 aa13.3□□□□□ -0.28
PPARGC1A-213ENST00000514494 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
PPARGC1A-213ENST00000514494 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
PPARGC1A-213ENST00000514494 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
PPARGC1A-213ENST00000514494 PTPREP23469 700 aa13.28□□□□□ -0.28
PPARGC1A-213ENST00000514494 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
PPARGC1A-213ENST00000514494 PTGER2P43116 358 aa13.27□□□□□ -0.29
PPARGC1A-213ENST00000514494 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
PPARGC1A-213ENST00000514494 EPAS1Q99814 870 aa13.27□□□□□ -0.29
PPARGC1A-213ENST00000514494 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
PPARGC1A-213ENST00000514494 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
PPARGC1A-213ENST00000514494 NBR1Q14596 966 aa13.25□□□□□ -0.29
PPARGC1A-213ENST00000514494 DMRTA1Q5VZB9 504 aa13.24□□□□□ -0.29
PPARGC1A-213ENST00000514494 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms