RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 POGZQ7Z3K3 1410 aa22.49■■□□□ 1.19
CCND3-220ENST00000514382 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
CCND3-220ENST00000514382 FER1L4A9Z1Z3 1794 aa22.48■■□□□ 1.19
CCND3-220ENST00000514382 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
CCND3-220ENST00000514382 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
CCND3-220ENST00000514382 ATP1B4Q9UN42 357 aaPredicted RBP22.46■■□□□ 1.19
CCND3-220ENST00000514382 HSPA2P54652 639 aa22.45■■□□□ 1.18
CCND3-220ENST00000514382 MLECQ14165 292 aa22.44■■□□□ 1.18
CCND3-220ENST00000514382 CDC42BPBQ9Y5S2 1711 aa22.44■■□□□ 1.18
CCND3-220ENST00000514382 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
CCND3-220ENST00000514382 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
CCND3-220ENST00000514382 ARHGEF12Q9NZN5 1544 aa22.39■■□□□ 1.17
CCND3-220ENST00000514382 TROQ12816 1431 aaPredicted RBP22.39■■□□□ 1.17
CCND3-220ENST00000514382 ATP10AO60312 1499 aa22.36■■□□□ 1.17
CCND3-220ENST00000514382 FBXO41Q8TF61 875 aa22.36■■□□□ 1.17
CCND3-220ENST00000514382 KDM5CP41229 1560 aa22.36■■□□□ 1.17
CCND3-220ENST00000514382 AFAP1Q8N556 730 aa22.35■■□□□ 1.17
CCND3-220ENST00000514382 ARHGAP5Q13017 1502 aa22.35■■□□□ 1.17
CCND3-220ENST00000514382 DIP2CQ9Y2E4 1556 aa22.34■■□□□ 1.17
CCND3-220ENST00000514382 ABCA6Q8N139 1617 aa22.34■■□□□ 1.17
CCND3-220ENST00000514382 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
CCND3-220ENST00000514382 EFCAB2Q5VUJ9 269 aa22.33■■□□□ 1.17
CCND3-220ENST00000514382 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
CCND3-220ENST00000514382 PREX2Q70Z35 1606 aa22.31■■□□□ 1.16
CCND3-220ENST00000514382 CDC42BPAQ5VT25 1732 aa22.31■■□□□ 1.16
CCND3-220ENST00000514382 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
CCND3-220ENST00000514382 TRAPPC8Q9Y2L5 1435 aa22.29■■□□□ 1.16
CCND3-220ENST00000514382 STRCQ7RTU9 1775 aa22.28■■□□□ 1.16
CCND3-220ENST00000514382 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
CCND3-220ENST00000514382 ABCC1P33527 1531 aa22.27■■□□□ 1.16
CCND3-220ENST00000514382 PREX1Q8TCU6 1659 aa22.27■■□□□ 1.16
CCND3-220ENST00000514382 KIDINS220Q9ULH0 1771 aa22.25■■□□□ 1.15
CCND3-220ENST00000514382 CASKIN1Q8WXD9 1431 aa22.25■■□□□ 1.15
CCND3-220ENST00000514382 C3P01024 1663 aa22.24■■□□□ 1.15
CCND3-220ENST00000514382 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
CCND3-220ENST00000514382 CLIP1P30622 1438 aa22.23■■□□□ 1.15
CCND3-220ENST00000514382 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
CCND3-220ENST00000514382 MLH3Q9UHC1 1453 aa22.2■■□□□ 1.14
CCND3-220ENST00000514382 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.14
CCND3-220ENST00000514382 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
CCND3-220ENST00000514382 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
CCND3-220ENST00000514382 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
CCND3-220ENST00000514382 AGLP35573 1532 aa22.14■■□□□ 1.13
CCND3-220ENST00000514382 SYCP2Q9BX26 1530 aa22.13■■□□□ 1.13
CCND3-220ENST00000514382 MYT1LQ9UL68 1186 aa22.13■■□□□ 1.13
CCND3-220ENST00000514382 CERKQ8TCT0 537 aa22.12■■□□□ 1.13
CCND3-220ENST00000514382 GPATCH8Q9UKJ3 1502 aaKnown RBP22.11■■□□□ 1.13
CCND3-220ENST00000514382 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
CCND3-220ENST00000514382 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
CCND3-220ENST00000514382 HNRNPMP52272 730 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCND3-220ENST00000514382 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
CCND3-220ENST00000514382 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
CCND3-220ENST00000514382 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
CCND3-220ENST00000514382 PLXNC1O60486 1568 aa22.01■■□□□ 1.11
CCND3-220ENST00000514382 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
CCND3-220ENST00000514382 MROH2AA6NES4 1674 aa22■■□□□ 1.11
CCND3-220ENST00000514382 TIAM1Q13009 1591 aa21.99■■□□□ 1.11
CCND3-220ENST00000514382 ZNF644Q9H582 1327 aaPredicted RBP21.99■■□□□ 1.11
CCND3-220ENST00000514382 LTBP4Q8N2S1 1624 aa21.97■■□□□ 1.11
CCND3-220ENST00000514382 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
CCND3-220ENST00000514382 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
CCND3-220ENST00000514382 PTPRTO14522 1441 aa21.93■■□□□ 1.1
CCND3-220ENST00000514382 CAMSAP1Q5T5Y3 1602 aa21.93■■□□□ 1.1
CCND3-220ENST00000514382 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
CCND3-220ENST00000514382 A2MP01023 1474 aa21.92■■□□□ 1.1
CCND3-220ENST00000514382 ZMYM3Q14202 1370 aa21.92■■□□□ 1.1
CCND3-220ENST00000514382 ADGBQ8N7X0 1667 aa21.91■■□□□ 1.1
CCND3-220ENST00000514382 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
CCND3-220ENST00000514382 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
CCND3-220ENST00000514382 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
CCND3-220ENST00000514382 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
CCND3-220ENST00000514382 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
CCND3-220ENST00000514382 ZNF142P52746 1687 aaPredicted RBP21.88■■□□□ 1.09
CCND3-220ENST00000514382 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
CCND3-220ENST00000514382 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
CCND3-220ENST00000514382 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
CCND3-220ENST00000514382 NPATQ14207 1427 aa21.87■■□□□ 1.09
CCND3-220ENST00000514382 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
CCND3-220ENST00000514382 NCKAP5LQ9HCH0 1330 aa21.86■■□□□ 1.09
CCND3-220ENST00000514382 PLEKHH2Q8IVE3 1493 aa21.86■■□□□ 1.09
CCND3-220ENST00000514382 DMRT2Q9Y5R5 561 aa21.85■■□□□ 1.09
CCND3-220ENST00000514382 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
CCND3-220ENST00000514382 GGT6Q6P531 493 aa21.83■■□□□ 1.09
CCND3-220ENST00000514382 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
CCND3-220ENST00000514382 ILDR2Q71H61 639 aa21.81■■□□□ 1.08
CCND3-220ENST00000514382 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
CCND3-220ENST00000514382 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
CCND3-220ENST00000514382 NCOA2Q15596 1464 aa21.77■■□□□ 1.08
CCND3-220ENST00000514382 TCOF1Q13428 1488 aaKnown RBP21.77■■□□□ 1.07
CCND3-220ENST00000514382 DNMT1P26358 1616 aaKnown RBP21.77■■□□□ 1.07
CCND3-220ENST00000514382 DHX29Q7Z478 1369 aaKnown RBP21.74■■□□□ 1.07
CCND3-220ENST00000514382 RTEL1-TNFRSF6BF6WH68 1400 aa21.73■■□□□ 1.07
CCND3-220ENST00000514382 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
CCND3-220ENST00000514382 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
CCND3-220ENST00000514382 NEURL4Q96JN8 1562 aa21.72■■□□□ 1.07
CCND3-220ENST00000514382 CCDC141Q6ZP82 1450 aa21.71■■□□□ 1.07
CCND3-220ENST00000514382 DISP3Q9P2K9 1392 aa21.7■■□□□ 1.06
CCND3-220ENST00000514382 IQSEC2Q5JU85 1478 aa21.7■■□□□ 1.06
CCND3-220ENST00000514382 POLR1AO95602 1720 aaPredicted RBP21.69■■□□□ 1.06
CCND3-220ENST00000514382 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms