RNA–Protein interactions for RNA: ENST00000514352.5

CCSER1-212, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-212ENST00000514352 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
CCSER1-212ENST00000514352 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
CCSER1-212ENST00000514352 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
CCSER1-212ENST00000514352 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
CCSER1-212ENST00000514352 MS4A4AQ96JQ5 239 aa10.05□□□□□ -0.8
CCSER1-212ENST00000514352 PHF8Q9UPP1 1060 aa10.05□□□□□ -0.8
CCSER1-212ENST00000514352 NLRP6P59044 892 aa10.04□□□□□ -0.8
CCSER1-212ENST00000514352 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCSER1-212ENST00000514352 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
CCSER1-212ENST00000514352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.03□□□□□ -0.8
CCSER1-212ENST00000514352 PBX2P40425 430 aa10.03□□□□□ -0.8
CCSER1-212ENST00000514352 ZFP91Q96JP5 570 aaPredicted RBP10.03□□□□□ -0.8
CCSER1-212ENST00000514352 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCSER1-212ENST00000514352 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
CCSER1-212ENST00000514352 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
CCSER1-212ENST00000514352 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
CCSER1-212ENST00000514352 SLC34A2O95436 690 aa9.92□□□□□ -0.82
CCSER1-212ENST00000514352 NUDT7P0C024 238 aa9.92□□□□□ -0.82
CCSER1-212ENST00000514352 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
CCSER1-212ENST00000514352 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
CCSER1-212ENST00000514352 KIF3CO14782 793 aa9.9□□□□□ -0.82
CCSER1-212ENST00000514352 LHX6Q9UPM6 363 aa9.9□□□□□ -0.82
CCSER1-212ENST00000514352 C2orf72A6NCS6 295 aa9.89□□□□□ -0.83
CCSER1-212ENST00000514352 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
CCSER1-212ENST00000514352 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
CCSER1-212ENST00000514352 ARHGAP33O14559 1287 aa9.87□□□□□ -0.83
CCSER1-212ENST00000514352 AXIN2Q9Y2T1 843 aa9.87□□□□□ -0.83
CCSER1-212ENST00000514352 STK24Q9Y6E0 443 aa9.87□□□□□ -0.83
CCSER1-212ENST00000514352 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
CCSER1-212ENST00000514352 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
CCSER1-212ENST00000514352 POTEEQ6S8J3 1075 aa9.84□□□□□ -0.83
CCSER1-212ENST00000514352 MFRPQ9BY79 579 aa9.84□□□□□ -0.83
CCSER1-212ENST00000514352 TK2O00142 265 aa9.83□□□□□ -0.84
CCSER1-212ENST00000514352 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
CCSER1-212ENST00000514352 STK25O00506 426 aa9.8□□□□□ -0.84
CCSER1-212ENST00000514352 HRO43593 1189 aa9.74□□□□□ -0.85
CCSER1-212ENST00000514352 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
CCSER1-212ENST00000514352 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
CCSER1-212ENST00000514352 TBC1D12O60347 775 aa9.73□□□□□ -0.85
CCSER1-212ENST00000514352 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
CCSER1-212ENST00000514352 RGS20O76081 388 aa9.71□□□□□ -0.86
CCSER1-212ENST00000514352 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
CCSER1-212ENST00000514352 KDM4FA0A1W2PPD8 638 aa9.7□□□□□ -0.86
CCSER1-212ENST00000514352 PSEN2P49810 448 aa9.69□□□□□ -0.86
CCSER1-212ENST00000514352 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
CCSER1-212ENST00000514352 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
CCSER1-212ENST00000514352 FOXK1P85037 733 aa9.66□□□□□ -0.86
CCSER1-212ENST00000514352 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
CCSER1-212ENST00000514352 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
CCSER1-212ENST00000514352 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
CCSER1-212ENST00000514352 PTPN5P54829 565 aa9.61□□□□□ -0.87
CCSER1-212ENST00000514352 PPP1R37O75864 691 aa9.6□□□□□ -0.87
CCSER1-212ENST00000514352 KCNK17Q96T54 332 aa9.6□□□□□ -0.87
CCSER1-212ENST00000514352 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
CCSER1-212ENST00000514352 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
CCSER1-212ENST00000514352 IRX2Q9BZI1 471 aaPredicted RBP9.59□□□□□ -0.87
CCSER1-212ENST00000514352 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
CCSER1-212ENST00000514352 RGL2O15211 777 aa9.54□□□□□ -0.88
CCSER1-212ENST00000514352 DSG2Q14126 1118 aa9.54□□□□□ -0.88
CCSER1-212ENST00000514352 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
CCSER1-212ENST00000514352 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
CCSER1-212ENST00000514352 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
CCSER1-212ENST00000514352 A0A0G2JS52 829 aa9.51□□□□□ -0.89
CCSER1-212ENST00000514352 BHMG1C9JSJ3 638 aaPredicted RBP9.51□□□□□ -0.89
CCSER1-212ENST00000514352 PTPREP23469 700 aa9.51□□□□□ -0.89
CCSER1-212ENST00000514352 MRPL50Q8N5N7 158 aaKnown RBP9.5□□□□□ -0.89
CCSER1-212ENST00000514352 WNT2BQ93097 391 aa9.5□□□□□ -0.89
CCSER1-212ENST00000514352 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
CCSER1-212ENST00000514352 PKD2Q13563 968 aa9.48□□□□□ -0.89
CCSER1-212ENST00000514352 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
CCSER1-212ENST00000514352 FOSBP53539 338 aa9.45□□□□□ -0.9
CCSER1-212ENST00000514352 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
CCSER1-212ENST00000514352 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCSER1-212ENST00000514352 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
CCSER1-212ENST00000514352 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
CCSER1-212ENST00000514352 HS6ST3Q8IZP7 471 aa9.41□□□□□ -0.9
CCSER1-212ENST00000514352 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
CCSER1-212ENST00000514352 JPH4Q96JJ6 628 aa9.41□□□□□ -0.9
CCSER1-212ENST00000514352 PPP1R15BQ5SWA1 713 aa9.38□□□□□ -0.91
CCSER1-212ENST00000514352 ITGBL1O95965 494 aaPredicted RBP9.37□□□□□ -0.91
CCSER1-212ENST00000514352 PDE4AP27815 886 aa9.37□□□□□ -0.91
CCSER1-212ENST00000514352 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
CCSER1-212ENST00000514352 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
CCSER1-212ENST00000514352 CRISPLD2Q9H0B8 497 aa9.37□□□□□ -0.91
CCSER1-212ENST00000514352 Q6ZNB5 142 aa9.36□□□□□ -0.91
CCSER1-212ENST00000514352 EVI5O60447 810 aa9.35□□□□□ -0.91
CCSER1-212ENST00000514352 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
CCSER1-212ENST00000514352 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
CCSER1-212ENST00000514352 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
CCSER1-212ENST00000514352 LAPTM4BQ86VI4 370 aa9.33□□□□□ -0.92
CCSER1-212ENST00000514352 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
CCSER1-212ENST00000514352 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
CCSER1-212ENST00000514352 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
CCSER1-212ENST00000514352 KCNC4Q03721 635 aa9.3□□□□□ -0.92
CCSER1-212ENST00000514352 DNAJC5Q9H3Z4 198 aa9.3□□□□□ -0.92
CCSER1-212ENST00000514352 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
CCSER1-212ENST00000514352 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
CCSER1-212ENST00000514352 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
CCSER1-212ENST00000514352 BCAMP50895 628 aa9.24□□□□□ -0.93
CCSER1-212ENST00000514352 PROX2Q3B8N5 592 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms