RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
CALCOCO2-223ENST00000514267 GTPBP6O43824 516 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO2-223ENST00000514267 KIF3CO14782 793 aa8.49□□□□□ -1.05
CALCOCO2-223ENST00000514267 PPP1R37O75864 691 aa8.49□□□□□ -1.05
CALCOCO2-223ENST00000514267 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
CALCOCO2-223ENST00000514267 ST18O60284 1047 aa8.48□□□□□ -1.05
CALCOCO2-223ENST00000514267 PDE4AP27815 886 aa8.47□□□□□ -1.05
CALCOCO2-223ENST00000514267 TMEM92Q6UXU6 159 aa8.47□□□□□ -1.05
CALCOCO2-223ENST00000514267 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-223ENST00000514267 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
CALCOCO2-223ENST00000514267 POTEMA6NI47 508 aa8.46□□□□□ -1.06
CALCOCO2-223ENST00000514267 SLC34A2O95436 690 aa8.46□□□□□ -1.06
CALCOCO2-223ENST00000514267 POTEGQ6S5H5 508 aa8.46□□□□□ -1.06
CALCOCO2-223ENST00000514267 FOXK1P85037 733 aa8.45□□□□□ -1.06
CALCOCO2-223ENST00000514267 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
CALCOCO2-223ENST00000514267 HOXB3P14651 431 aaPredicted RBP8.44□□□□□ -1.06
CALCOCO2-223ENST00000514267 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
CALCOCO2-223ENST00000514267 EMP3P54852 163 aa8.43□□□□□ -1.06
CALCOCO2-223ENST00000514267 TBC1D12O60347 775 aa8.41□□□□□ -1.06
CALCOCO2-223ENST00000514267 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
CALCOCO2-223ENST00000514267 CRISPLD2Q9H0B8 497 aa8.41□□□□□ -1.06
CALCOCO2-223ENST00000514267 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-223ENST00000514267 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
CALCOCO2-223ENST00000514267 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
CALCOCO2-223ENST00000514267 PPP1R15BQ5SWA1 713 aa8.37□□□□□ -1.07
CALCOCO2-223ENST00000514267 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
CALCOCO2-223ENST00000514267 MFSD10Q14728 455 aa8.36□□□□□ -1.07
CALCOCO2-223ENST00000514267 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
CALCOCO2-223ENST00000514267 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
CALCOCO2-223ENST00000514267 DSG2Q14126 1118 aa8.35□□□□□ -1.07
CALCOCO2-223ENST00000514267 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
CALCOCO2-223ENST00000514267 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
CALCOCO2-223ENST00000514267 ERBB3P21860 1342 aa8.33□□□□□ -1.08
CALCOCO2-223ENST00000514267 MARVELD3Q96A59 401 aa8.33□□□□□ -1.08
CALCOCO2-223ENST00000514267 LARP6Q9BRS8 491 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-223ENST00000514267 PCDHGA4Q9Y5G9 962 aa8.33□□□□□ -1.08
CALCOCO2-223ENST00000514267 NCKAP5LQ9HCH0 1330 aa8.32□□□□□ -1.08
CALCOCO2-223ENST00000514267 ARSIQ5FYB1 569 aa8.31□□□□□ -1.08
CALCOCO2-223ENST00000514267 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
CALCOCO2-223ENST00000514267 HS3ST6Q96QI5 342 aa8.3□□□□□ -1.08
CALCOCO2-223ENST00000514267 FAM205CA6NFA0 338 aa8.29□□□□□ -1.08
CALCOCO2-223ENST00000514267 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
CALCOCO2-223ENST00000514267 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
CALCOCO2-223ENST00000514267 PBX2P40425 430 aa8.27□□□□□ -1.09
CALCOCO2-223ENST00000514267 VARS2Q5ST30 1063 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-223ENST00000514267 NUDT7P0C024 238 aa8.25□□□□□ -1.09
CALCOCO2-223ENST00000514267 KCNH8Q96L42 1107 aa8.25□□□□□ -1.09
CALCOCO2-223ENST00000514267 CAMK2BQ13554 666 aa8.24□□□□□ -1.09
CALCOCO2-223ENST00000514267 ZNF687Q8N1G0 1237 aa8.24□□□□□ -1.09
CALCOCO2-223ENST00000514267 MAP3K9P80192 1104 aa8.23□□□□□ -1.09
CALCOCO2-223ENST00000514267 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
CALCOCO2-223ENST00000514267 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
CALCOCO2-223ENST00000514267 CADPS2Q86UW7 1296 aa8.23□□□□□ -1.09
CALCOCO2-223ENST00000514267 UPF1Q92900 1129 aaKnown RBP eCLIP8.21□□□□□ -1.1
CALCOCO2-223ENST00000514267 LHX6Q9UPM6 363 aa8.21□□□□□ -1.1
CALCOCO2-223ENST00000514267 KDM4FA0A1W2PPD8 638 aa8.2□□□□□ -1.1
CALCOCO2-223ENST00000514267 PTGER2P43116 358 aa8.2□□□□□ -1.1
CALCOCO2-223ENST00000514267 E2F4Q16254 413 aa8.2□□□□□ -1.1
CALCOCO2-223ENST00000514267 ARIH1Q9Y4X5 557 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-223ENST00000514267 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-223ENST00000514267 EVI5O60447 810 aa8.18□□□□□ -1.1
CALCOCO2-223ENST00000514267 KHSRPQ92945 711 aaKnown RBP eCLIP8.18□□□□□ -1.1
CALCOCO2-223ENST00000514267 JPH4Q96JJ6 628 aa8.18□□□□□ -1.1
CALCOCO2-223ENST00000514267 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-223ENST00000514267 P3H3Q8IVL6 736 aa8.17□□□□□ -1.1
CALCOCO2-223ENST00000514267 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
CALCOCO2-223ENST00000514267 ARHGAP33O14559 1287 aa8.14□□□□□ -1.11
CALCOCO2-223ENST00000514267 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
CALCOCO2-223ENST00000514267 POTEB3A0JP26 581 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 FOSBP53539 338 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 POTEBQ6S5H4 581 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 EPAS1Q99814 870 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
CALCOCO2-223ENST00000514267 PHF14O94880 888 aa8.12□□□□□ -1.11
CALCOCO2-223ENST00000514267 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
CALCOCO2-223ENST00000514267 PDIA6Q15084 440 aa8.12□□□□□ -1.11
CALCOCO2-223ENST00000514267 TSHZ2Q9NRE2 1034 aa8.12□□□□□ -1.11
CALCOCO2-223ENST00000514267 DPYSL4O14531 572 aa8.11□□□□□ -1.11
CALCOCO2-223ENST00000514267 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
CALCOCO2-223ENST00000514267 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
CALCOCO2-223ENST00000514267 TK2O00142 265 aa8.1□□□□□ -1.11
CALCOCO2-223ENST00000514267 PTPREP23469 700 aa8.1□□□□□ -1.11
CALCOCO2-223ENST00000514267 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
CALCOCO2-223ENST00000514267 PLSCR2Q9NRY7 297 aa8.1□□□□□ -1.11
CALCOCO2-223ENST00000514267 ARHGEF1Q92888 912 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-223ENST00000514267 SPNS2Q8IVW8 549 aa8.08□□□□□ -1.12
CALCOCO2-223ENST00000514267 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
CALCOCO2-223ENST00000514267 HAP1P54257 671 aaPredicted RBP8.05□□□□□ -1.12
CALCOCO2-223ENST00000514267 ANKRD13DQ6ZTN6 518 aa8.05□□□□□ -1.12
CALCOCO2-223ENST00000514267 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
CALCOCO2-223ENST00000514267 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
CALCOCO2-223ENST00000514267 PCDHGA10Q9Y5H3 936 aa8.04□□□□□ -1.12
CALCOCO2-223ENST00000514267 PPP1R3GB7ZBB8 358 aa8.03□□□□□ -1.12
CALCOCO2-223ENST00000514267 ADGRD1Q6QNK2 874 aa8.03□□□□□ -1.12
CALCOCO2-223ENST00000514267 MMRN1Q13201 1228 aa8.02□□□□□ -1.13
CALCOCO2-223ENST00000514267 VSIG10Q8N0Z9 540 aa8.02□□□□□ -1.13
CALCOCO2-223ENST00000514267 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
CALCOCO2-223ENST00000514267 CERKQ8TCT0 537 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms