RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 IFFO2Q5TF58 517 aa8.86□□□□□ -0.99
SMARCAD1-208ENST00000514232 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
SMARCAD1-208ENST00000514232 HRO43593 1189 aa8.82□□□□□ -1
SMARCAD1-208ENST00000514232 A0A0G2JS52 829 aa8.79□□□□□ -1
SMARCAD1-208ENST00000514232 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
SMARCAD1-208ENST00000514232 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
SMARCAD1-208ENST00000514232 TK2O00142 265 aa8.75□□□□□ -1.01
SMARCAD1-208ENST00000514232 NUDT7P0C024 238 aa8.75□□□□□ -1.01
SMARCAD1-208ENST00000514232 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
SMARCAD1-208ENST00000514232 ARHGAP33O14559 1287 aa8.73□□□□□ -1.01
SMARCAD1-208ENST00000514232 Q6ZNB5 142 aa8.73□□□□□ -1.01
SMARCAD1-208ENST00000514232 LCE2BO14633 110 aa8.72□□□□□ -1.01
SMARCAD1-208ENST00000514232 MS4A4AQ96JQ5 239 aa8.71□□□□□ -1.02
SMARCAD1-208ENST00000514232 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
SMARCAD1-208ENST00000514232 PCDHGA4Q9Y5G9 962 aa8.64□□□□□ -1.03
SMARCAD1-208ENST00000514232 KIF3CO14782 793 aa8.62□□□□□ -1.03
SMARCAD1-208ENST00000514232 SLC34A2O95436 690 aa8.62□□□□□ -1.03
SMARCAD1-208ENST00000514232 PSEN2P49810 448 aa8.62□□□□□ -1.03
SMARCAD1-208ENST00000514232 PTPN5P54829 565 aa8.62□□□□□ -1.03
SMARCAD1-208ENST00000514232 SOX12O15370 315 aa8.6□□□□□ -1.03
SMARCAD1-208ENST00000514232 KDM4FA0A1W2PPD8 638 aa8.58□□□□□ -1.04
SMARCAD1-208ENST00000514232 EHMT2Q96KQ7 1210 aa8.58□□□□□ -1.04
SMARCAD1-208ENST00000514232 PSDA5PKW4 1024 aaPredicted RBP8.57□□□□□ -1.04
SMARCAD1-208ENST00000514232 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
SMARCAD1-208ENST00000514232 PHF8Q9UPP1 1060 aa8.56□□□□□ -1.04
SMARCAD1-208ENST00000514232 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
SMARCAD1-208ENST00000514232 TRAF7Q6Q0C0 670 aa8.54□□□□□ -1.04
SMARCAD1-208ENST00000514232 THSD4Q6ZMP0 1018 aa8.54□□□□□ -1.04
SMARCAD1-208ENST00000514232 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
SMARCAD1-208ENST00000514232 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
SMARCAD1-208ENST00000514232 VPS9D1Q9Y2B5 631 aa8.5□□□□□ -1.05
SMARCAD1-208ENST00000514232 FBXO3Q9UK99 471 aa8.49□□□□□ -1.05
SMARCAD1-208ENST00000514232 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
SMARCAD1-208ENST00000514232 VASPP50552 380 aaPredicted RBP8.48□□□□□ -1.05
SMARCAD1-208ENST00000514232 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
SMARCAD1-208ENST00000514232 FBXO22Q8NEZ5 403 aa8.44□□□□□ -1.06
SMARCAD1-208ENST00000514232 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
SMARCAD1-208ENST00000514232 ZNF775Q96BV0 537 aaPredicted RBP8.43□□□□□ -1.06
SMARCAD1-208ENST00000514232 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
SMARCAD1-208ENST00000514232 KCNK17Q96T54 332 aa8.42□□□□□ -1.06
SMARCAD1-208ENST00000514232 SLC4A5Q9BY07 1137 aa8.41□□□□□ -1.06
SMARCAD1-208ENST00000514232 GFRA3O60609 400 aa8.4□□□□□ -1.06
SMARCAD1-208ENST00000514232 FKBP8Q14318 412 aa8.4□□□□□ -1.06
SMARCAD1-208ENST00000514232 WNT2BQ93097 391 aa8.39□□□□□ -1.07
SMARCAD1-208ENST00000514232 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
SMARCAD1-208ENST00000514232 NLRP6P59044 892 aa8.37□□□□□ -1.07
SMARCAD1-208ENST00000514232 ZNF787Q6DD87 383 aa8.37□□□□□ -1.07
SMARCAD1-208ENST00000514232 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
SMARCAD1-208ENST00000514232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.35□□□□□ -1.07
SMARCAD1-208ENST00000514232 ZFP91Q96JP5 570 aaPredicted RBP8.35□□□□□ -1.07
SMARCAD1-208ENST00000514232 LOC100996750A0A140TA64 210 aa8.34□□□□□ -1.07
SMARCAD1-208ENST00000514232 KRTAP4-6Q9BYQ5 205 aa8.34□□□□□ -1.07
SMARCAD1-208ENST00000514232 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
SMARCAD1-208ENST00000514232 KCNH8Q96L42 1107 aa8.33□□□□□ -1.08
SMARCAD1-208ENST00000514232 TRIM41Q8WV44 630 aa8.32□□□□□ -1.08
SMARCAD1-208ENST00000514232 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
SMARCAD1-208ENST00000514232 GOLGA8CPA6NN73 597 aa8.3□□□□□ -1.08
SMARCAD1-208ENST00000514232 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
SMARCAD1-208ENST00000514232 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
SMARCAD1-208ENST00000514232 ZBED2Q9BTP6 218 aa8.29□□□□□ -1.08
SMARCAD1-208ENST00000514232 RIOK3O14730 519 aaKnown RBP8.28□□□□□ -1.08
SMARCAD1-208ENST00000514232 IFNLR1Q8IU57 520 aaPredicted RBP8.28□□□□□ -1.08
SMARCAD1-208ENST00000514232 MFRPQ9BY79 579 aa8.28□□□□□ -1.08
SMARCAD1-208ENST00000514232 BCL2L12Q9HB09 334 aa8.27□□□□□ -1.09
SMARCAD1-208ENST00000514232 VGFO15240 615 aaPredicted RBP8.25□□□□□ -1.09
SMARCAD1-208ENST00000514232 KCNC4Q03721 635 aa8.25□□□□□ -1.09
SMARCAD1-208ENST00000514232 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
SMARCAD1-208ENST00000514232 NBPF3Q9H094 633 aa8.21□□□□□ -1.1
SMARCAD1-208ENST00000514232 NYAP1Q6ZVC0 841 aa8.2□□□□□ -1.1
SMARCAD1-208ENST00000514232 PTPREP23469 700 aa8.17□□□□□ -1.1
SMARCAD1-208ENST00000514232 BCAMP50895 628 aa8.17□□□□□ -1.1
SMARCAD1-208ENST00000514232 FOXK1P85037 733 aa8.17□□□□□ -1.1
SMARCAD1-208ENST00000514232 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
SMARCAD1-208ENST00000514232 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
SMARCAD1-208ENST00000514232 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
SMARCAD1-208ENST00000514232 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
SMARCAD1-208ENST00000514232 TBC1D12O60347 775 aa8.15□□□□□ -1.1
SMARCAD1-208ENST00000514232 PLPP6Q8IY26 295 aa8.15□□□□□ -1.1
SMARCAD1-208ENST00000514232 FOSBP53539 338 aa8.14□□□□□ -1.11
SMARCAD1-208ENST00000514232 BCL11BQ9C0K0 894 aaPredicted RBP8.14□□□□□ -1.11
SMARCAD1-208ENST00000514232 WBP1LQ9NX94 342 aa8.13□□□□□ -1.11
SMARCAD1-208ENST00000514232 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
SMARCAD1-208ENST00000514232 TREML4Q6UXN2 200 aa8.11□□□□□ -1.11
SMARCAD1-208ENST00000514232 POTECB2RU33 542 aa8.09□□□□□ -1.11
SMARCAD1-208ENST00000514232 RABGEF1Q9UJ41 708 aa8.09□□□□□ -1.11
SMARCAD1-208ENST00000514232 PDZRN3Q9UPQ7 1066 aa8.09□□□□□ -1.11
SMARCAD1-208ENST00000514232 OXER1Q8TDS5 423 aa8.08□□□□□ -1.12
SMARCAD1-208ENST00000514232 DSG2Q14126 1118 aa8.07□□□□□ -1.12
SMARCAD1-208ENST00000514232 PPP1R37O75864 691 aa8.06□□□□□ -1.12
SMARCAD1-208ENST00000514232 ADAM33Q9BZ11 813 aa8.06□□□□□ -1.12
SMARCAD1-208ENST00000514232 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
SMARCAD1-208ENST00000514232 STK24Q9Y6E0 443 aa8.06□□□□□ -1.12
SMARCAD1-208ENST00000514232 LAPTM4BQ86VI4 370 aa8.05□□□□□ -1.12
SMARCAD1-208ENST00000514232 ZFRQ96KR1 1074 aaKnown RBP8.04□□□□□ -1.12
SMARCAD1-208ENST00000514232 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
SMARCAD1-208ENST00000514232 PROX2Q3B8N5 592 aa8.03□□□□□ -1.12
SMARCAD1-208ENST00000514232 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
SMARCAD1-208ENST00000514232 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
SMARCAD1-208ENST00000514232 PPP1R18Q6NYC8 613 aa8.01□□□□□ -1.13
SMARCAD1-208ENST00000514232 ZDHHC16Q969W1 377 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms