RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
SNX2-212ENST00000514030 TMEM92Q6UXU6 159 aa12.85□□□□□ -0.35
SNX2-212ENST00000514030 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
SNX2-212ENST00000514030 POTEB3A0JP26 581 aa12.82□□□□□ -0.36
SNX2-212ENST00000514030 POTEBQ6S5H4 581 aa12.82□□□□□ -0.36
SNX2-212ENST00000514030 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
SNX2-212ENST00000514030 PKD2Q13563 968 aa12.8□□□□□ -0.36
SNX2-212ENST00000514030 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
SNX2-212ENST00000514030 KRTAP3-2Q9BYR7 98 aa12.8□□□□□ -0.36
SNX2-212ENST00000514030 RGL2O15211 777 aa12.79□□□□□ -0.36
SNX2-212ENST00000514030 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
SNX2-212ENST00000514030 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
SNX2-212ENST00000514030 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
SNX2-212ENST00000514030 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
SNX2-212ENST00000514030 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
SNX2-212ENST00000514030 ZNF687Q8N1G0 1237 aa12.66□□□□□ -0.38
SNX2-212ENST00000514030 KIF3CO14782 793 aa12.64□□□□□ -0.39
SNX2-212ENST00000514030 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
SNX2-212ENST00000514030 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.4
SNX2-212ENST00000514030 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX2-212ENST00000514030 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
SNX2-212ENST00000514030 SLC34A2O95436 690 aa12.56□□□□□ -0.4
SNX2-212ENST00000514030 PTGER2P43116 358 aa12.56□□□□□ -0.4
SNX2-212ENST00000514030 NUDT7P0C024 238 aa12.55□□□□□ -0.4
SNX2-212ENST00000514030 PPP1R37O75864 691 aa12.54□□□□□ -0.4
SNX2-212ENST00000514030 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
SNX2-212ENST00000514030 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
SNX2-212ENST00000514030 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
SNX2-212ENST00000514030 PBX2P40425 430 aa12.49□□□□□ -0.41
SNX2-212ENST00000514030 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
SNX2-212ENST00000514030 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
SNX2-212ENST00000514030 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
SNX2-212ENST00000514030 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
SNX2-212ENST00000514030 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNX2-212ENST00000514030 FOXK1P85037 733 aa12.43□□□□□ -0.42
SNX2-212ENST00000514030 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
SNX2-212ENST00000514030 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
SNX2-212ENST00000514030 TBC1D12O60347 775 aa12.4□□□□□ -0.42
SNX2-212ENST00000514030 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
SNX2-212ENST00000514030 DNAJC5Q9H3Z4 198 aa12.39□□□□□ -0.43
SNX2-212ENST00000514030 DSG2Q14126 1118 aa12.35□□□□□ -0.43
SNX2-212ENST00000514030 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
SNX2-212ENST00000514030 ARHGAP33O14559 1287 aa12.33□□□□□ -0.44
SNX2-212ENST00000514030 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
SNX2-212ENST00000514030 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
SNX2-212ENST00000514030 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
SNX2-212ENST00000514030 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
SNX2-212ENST00000514030 KDM4FA0A1W2PPD8 638 aa12.28□□□□□ -0.44
SNX2-212ENST00000514030 ADGRD1Q6QNK2 874 aa12.28□□□□□ -0.44
SNX2-212ENST00000514030 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
SNX2-212ENST00000514030 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
SNX2-212ENST00000514030 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
SNX2-212ENST00000514030 TK2O00142 265 aa12.24□□□□□ -0.45
SNX2-212ENST00000514030 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX2-212ENST00000514030 PDE4AP27815 886 aa12.23□□□□□ -0.45
SNX2-212ENST00000514030 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
SNX2-212ENST00000514030 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
SNX2-212ENST00000514030 PSEN2P49810 448 aa12.2□□□□□ -0.46
SNX2-212ENST00000514030 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
SNX2-212ENST00000514030 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
SNX2-212ENST00000514030 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
SNX2-212ENST00000514030 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
SNX2-212ENST00000514030 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
SNX2-212ENST00000514030 NCKAP5LQ9HCH0 1330 aa12.15□□□□□ -0.46
SNX2-212ENST00000514030 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
SNX2-212ENST00000514030 HRO43593 1189 aa12.13□□□□□ -0.47
SNX2-212ENST00000514030 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
SNX2-212ENST00000514030 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
SNX2-212ENST00000514030 PTPREP23469 700 aa12.09□□□□□ -0.47
SNX2-212ENST00000514030 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
SNX2-212ENST00000514030 EVI5O60447 810 aa12.08□□□□□ -0.48
SNX2-212ENST00000514030 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
SNX2-212ENST00000514030 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
SNX2-212ENST00000514030 FOSBP53539 338 aa12.07□□□□□ -0.48
SNX2-212ENST00000514030 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
SNX2-212ENST00000514030 MFSD10Q14728 455 aa12.06□□□□□ -0.48
SNX2-212ENST00000514030 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
SNX2-212ENST00000514030 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
SNX2-212ENST00000514030 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
SNX2-212ENST00000514030 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
SNX2-212ENST00000514030 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
SNX2-212ENST00000514030 NBPF3Q9H094 633 aa11.98□□□□□ -0.49
SNX2-212ENST00000514030 MRPL50Q8N5N7 158 aaKnown RBP11.97□□□□□ -0.49
SNX2-212ENST00000514030 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
SNX2-212ENST00000514030 ADAM33Q9BZ11 813 aa11.97□□□□□ -0.49
SNX2-212ENST00000514030 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
SNX2-212ENST00000514030 PTPN5P54829 565 aa11.95□□□□□ -0.5
SNX2-212ENST00000514030 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
SNX2-212ENST00000514030 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
SNX2-212ENST00000514030 BHMG1C9JSJ3 638 aaPredicted RBP11.92□□□□□ -0.5
SNX2-212ENST00000514030 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
SNX2-212ENST00000514030 TYW1BQ6NUM6 668 aa11.91□□□□□ -0.5
SNX2-212ENST00000514030 WNT2BQ93097 391 aa11.91□□□□□ -0.5
SNX2-212ENST00000514030 PHF14O94880 888 aa11.9□□□□□ -0.5
SNX2-212ENST00000514030 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
SNX2-212ENST00000514030 PCDHGA10Q9Y5H3 936 aa11.9□□□□□ -0.5
SNX2-212ENST00000514030 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SNX2-212ENST00000514030 CAMK2BQ13554 666 aa11.85□□□□□ -0.51
SNX2-212ENST00000514030 EPAS1Q99814 870 aa11.85□□□□□ -0.51
SNX2-212ENST00000514030 RABGEF1Q9UJ41 708 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms