RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
LINC00616-204ENST00000513895 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
LINC00616-204ENST00000513895 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
LINC00616-204ENST00000513895 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
LINC00616-204ENST00000513895 RIMBP2O15034 1052 aa13.1□□□□□ -0.31
LINC00616-204ENST00000513895 STK25O00506 426 aa13.08□□□□□ -0.32
LINC00616-204ENST00000513895 PKD2Q13563 968 aa13.07□□□□□ -0.32
LINC00616-204ENST00000513895 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
LINC00616-204ENST00000513895 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
LINC00616-204ENST00000513895 ERBB3P21860 1342 aa13.04□□□□□ -0.32
LINC00616-204ENST00000513895 RGL2O15211 777 aa13.03□□□□□ -0.32
LINC00616-204ENST00000513895 GPR153Q6NV75 609 aa12.99□□□□□ -0.33
LINC00616-204ENST00000513895 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
LINC00616-204ENST00000513895 KIF3CO14782 793 aa12.92□□□□□ -0.34
LINC00616-204ENST00000513895 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
LINC00616-204ENST00000513895 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
LINC00616-204ENST00000513895 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
LINC00616-204ENST00000513895 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00616-204ENST00000513895 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
LINC00616-204ENST00000513895 PPP1R37O75864 691 aa12.81□□□□□ -0.36
LINC00616-204ENST00000513895 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
LINC00616-204ENST00000513895 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
LINC00616-204ENST00000513895 SLC34A2O95436 690 aa12.77□□□□□ -0.37
LINC00616-204ENST00000513895 NUDT7P0C024 238 aa12.76□□□□□ -0.37
LINC00616-204ENST00000513895 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
LINC00616-204ENST00000513895 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
LINC00616-204ENST00000513895 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
LINC00616-204ENST00000513895 PTGER2P43116 358 aa12.69□□□□□ -0.38
LINC00616-204ENST00000513895 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
LINC00616-204ENST00000513895 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
LINC00616-204ENST00000513895 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00616-204ENST00000513895 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
LINC00616-204ENST00000513895 PBX2P40425 430 aa12.65□□□□□ -0.38
LINC00616-204ENST00000513895 FOXK1P85037 733 aa12.65□□□□□ -0.38
LINC00616-204ENST00000513895 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
LINC00616-204ENST00000513895 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
LINC00616-204ENST00000513895 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
LINC00616-204ENST00000513895 PTCD2Q8WV60 388 aaKnown RBP12.62□□□□□ -0.39
LINC00616-204ENST00000513895 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
LINC00616-204ENST00000513895 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
LINC00616-204ENST00000513895 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
LINC00616-204ENST00000513895 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
LINC00616-204ENST00000513895 DSG2Q14126 1118 aa12.58□□□□□ -0.4
LINC00616-204ENST00000513895 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
LINC00616-204ENST00000513895 RYDENQ9NUL5 291 aaKnown RBP12.55□□□□□ -0.4
LINC00616-204ENST00000513895 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
LINC00616-204ENST00000513895 TBC1D12O60347 775 aa12.49□□□□□ -0.41
LINC00616-204ENST00000513895 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
LINC00616-204ENST00000513895 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
LINC00616-204ENST00000513895 ADGRD1Q6QNK2 874 aa12.48□□□□□ -0.41
LINC00616-204ENST00000513895 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
LINC00616-204ENST00000513895 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
LINC00616-204ENST00000513895 PSEN2P49810 448 aa12.44□□□□□ -0.42
LINC00616-204ENST00000513895 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
LINC00616-204ENST00000513895 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
LINC00616-204ENST00000513895 TK2O00142 265 aa12.42□□□□□ -0.42
LINC00616-204ENST00000513895 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00616-204ENST00000513895 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
LINC00616-204ENST00000513895 HRO43593 1189 aa12.39□□□□□ -0.43
LINC00616-204ENST00000513895 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
LINC00616-204ENST00000513895 PDE4AP27815 886 aa12.37□□□□□ -0.43
LINC00616-204ENST00000513895 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
LINC00616-204ENST00000513895 KCNH8Q96L42 1107 aa12.35□□□□□ -0.43
LINC00616-204ENST00000513895 ZNF454Q8N9F8 522 aa12.34□□□□□ -0.43
LINC00616-204ENST00000513895 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
LINC00616-204ENST00000513895 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
LINC00616-204ENST00000513895 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
LINC00616-204ENST00000513895 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
LINC00616-204ENST00000513895 FOSBP53539 338 aa12.3□□□□□ -0.44
LINC00616-204ENST00000513895 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
LINC00616-204ENST00000513895 MFSD10Q14728 455 aa12.28□□□□□ -0.44
LINC00616-204ENST00000513895 EVI5O60447 810 aa12.27□□□□□ -0.45
LINC00616-204ENST00000513895 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
LINC00616-204ENST00000513895 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
LINC00616-204ENST00000513895 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.45
LINC00616-204ENST00000513895 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
LINC00616-204ENST00000513895 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
LINC00616-204ENST00000513895 KCTD12Q96CX2 325 aaKnown RBP12.25□□□□□ -0.45
LINC00616-204ENST00000513895 PTPREP23469 700 aa12.24□□□□□ -0.45
LINC00616-204ENST00000513895 SLC4A5Q9BY07 1137 aa12.24□□□□□ -0.45
LINC00616-204ENST00000513895 EMILIN3Q9NT22 766 aa12.21□□□□□ -0.45
LINC00616-204ENST00000513895 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
LINC00616-204ENST00000513895 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
LINC00616-204ENST00000513895 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
LINC00616-204ENST00000513895 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
LINC00616-204ENST00000513895 ADAM33Q9BZ11 813 aa12.19□□□□□ -0.46
LINC00616-204ENST00000513895 CCDC180Q9P1Z9 1646 aa12.18□□□□□ -0.46
LINC00616-204ENST00000513895 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
LINC00616-204ENST00000513895 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
LINC00616-204ENST00000513895 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
LINC00616-204ENST00000513895 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
LINC00616-204ENST00000513895 PTPN5P54829 565 aa12.11□□□□□ -0.47
LINC00616-204ENST00000513895 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
LINC00616-204ENST00000513895 PPP1R3GB7ZBB8 358 aa12.1□□□□□ -0.47
LINC00616-204ENST00000513895 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
LINC00616-204ENST00000513895 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
LINC00616-204ENST00000513895 NBPF3Q9H094 633 aa12.09□□□□□ -0.47
LINC00616-204ENST00000513895 GOLGA8CPA6NN73 597 aa12.07□□□□□ -0.48
LINC00616-204ENST00000513895 PHF14O94880 888 aa12.07□□□□□ -0.48
LINC00616-204ENST00000513895 WNT2BQ93097 391 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms