RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
ATP2C1-220ENST00000513636 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
ATP2C1-220ENST00000513636 STK25O00506 426 aa11.83□□□□□ -0.52
ATP2C1-220ENST00000513636 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
ATP2C1-220ENST00000513636 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
ATP2C1-220ENST00000513636 TMEM92Q6UXU6 159 aa11.79□□□□□ -0.52
ATP2C1-220ENST00000513636 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-220ENST00000513636 VARS2Q5ST30 1063 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-220ENST00000513636 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
ATP2C1-220ENST00000513636 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
ATP2C1-220ENST00000513636 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
ATP2C1-220ENST00000513636 GPR153Q6NV75 609 aa11.7□□□□□ -0.54
ATP2C1-220ENST00000513636 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
ATP2C1-220ENST00000513636 RGL2O15211 777 aa11.67□□□□□ -0.54
ATP2C1-220ENST00000513636 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
ATP2C1-220ENST00000513636 PKD2Q13563 968 aa11.66□□□□□ -0.54
ATP2C1-220ENST00000513636 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
ATP2C1-220ENST00000513636 C2orf72A6NCS6 295 aa11.62□□□□□ -0.55
ATP2C1-220ENST00000513636 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
ATP2C1-220ENST00000513636 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■□□□ 13.6
ATP2C1-220ENST00000513636 ANKRD13DQ6ZTN6 518 aa11.58□□□□□ -0.56
ATP2C1-220ENST00000513636 KIF3CO14782 793 aa11.56□□□□□ -0.56
ATP2C1-220ENST00000513636 NUDT7P0C024 238 aa11.55□□□□□ -0.56
ATP2C1-220ENST00000513636 PTGER2P43116 358 aa11.55□□□□□ -0.56
ATP2C1-220ENST00000513636 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
ATP2C1-220ENST00000513636 SLC34A2O95436 690 aa11.5□□□□□ -0.57
ATP2C1-220ENST00000513636 PPP1R37O75864 691 aa11.49□□□□□ -0.57
ATP2C1-220ENST00000513636 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
ATP2C1-220ENST00000513636 PBX2P40425 430 aa11.47□□□□□ -0.57
ATP2C1-220ENST00000513636 LSM11P83369 360 aaKnown RBP eCLIP11.47□□□□□ -0.57
ATP2C1-220ENST00000513636 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
ATP2C1-220ENST00000513636 HS6ST3Q8IZP7 471 aa11.45□□□□□ -0.58
ATP2C1-220ENST00000513636 PSDA5PKW4 1024 aaPredicted RBP11.44□□□□□ -0.58
ATP2C1-220ENST00000513636 TBC1D12O60347 775 aa11.42□□□□□ -0.58
ATP2C1-220ENST00000513636 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
ATP2C1-220ENST00000513636 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
ATP2C1-220ENST00000513636 RYDENQ9NUL5 291 aaKnown RBP11.4□□□□□ -0.58
ATP2C1-220ENST00000513636 FOXK1P85037 733 aa11.38□□□□□ -0.59
ATP2C1-220ENST00000513636 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
ATP2C1-220ENST00000513636 ARHGAP33O14559 1287 aa11.36□□□□□ -0.59
ATP2C1-220ENST00000513636 PTCD2Q8WV60 388 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-220ENST00000513636 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
ATP2C1-220ENST00000513636 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
ATP2C1-220ENST00000513636 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
ATP2C1-220ENST00000513636 DSG2Q14126 1118 aa11.32□□□□□ -0.6
ATP2C1-220ENST00000513636 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
ATP2C1-220ENST00000513636 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
ATP2C1-220ENST00000513636 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
ATP2C1-220ENST00000513636 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
ATP2C1-220ENST00000513636 UPF1Q92900 1129 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATP2C1-220ENST00000513636 TK2O00142 265 aa11.24□□□□□ -0.61
ATP2C1-220ENST00000513636 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
ATP2C1-220ENST00000513636 PSEN2P49810 448 aa11.24□□□□□ -0.61
ATP2C1-220ENST00000513636 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
ATP2C1-220ENST00000513636 PDE4AP27815 886 aa11.23□□□□□ -0.61
ATP2C1-220ENST00000513636 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
ATP2C1-220ENST00000513636 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
ATP2C1-220ENST00000513636 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.61
ATP2C1-220ENST00000513636 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
ATP2C1-220ENST00000513636 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
ATP2C1-220ENST00000513636 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
ATP2C1-220ENST00000513636 OXER1Q8TDS5 423 aa11.19□□□□□ -0.62
ATP2C1-220ENST00000513636 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
ATP2C1-220ENST00000513636 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
ATP2C1-220ENST00000513636 HRO43593 1189 aa11.14□□□□□ -0.63
ATP2C1-220ENST00000513636 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
ATP2C1-220ENST00000513636 GOLGA8CPA6NN73 597 aa11.11□□□□□ -0.63
ATP2C1-220ENST00000513636 PTPREP23469 700 aa11.11□□□□□ -0.63
ATP2C1-220ENST00000513636 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
ATP2C1-220ENST00000513636 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
ATP2C1-220ENST00000513636 GTPBP6O43824 516 aaPredicted RBP11.09□□□□□ -0.63
ATP2C1-220ENST00000513636 EVI5O60447 810 aa11.09□□□□□ -0.63
ATP2C1-220ENST00000513636 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
ATP2C1-220ENST00000513636 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
ATP2C1-220ENST00000513636 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
ATP2C1-220ENST00000513636 FOSBP53539 338 aa11.07□□□□□ -0.64
ATP2C1-220ENST00000513636 PTPN5P54829 565 aa11.07□□□□□ -0.64
ATP2C1-220ENST00000513636 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
ATP2C1-220ENST00000513636 JPH4Q96JJ6 628 aa11.05□□□□□ -0.64
ATP2C1-220ENST00000513636 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
ATP2C1-220ENST00000513636 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
ATP2C1-220ENST00000513636 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
ATP2C1-220ENST00000513636 NBPF3Q9H094 633 aa11.01□□□□□ -0.65
ATP2C1-220ENST00000513636 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
ATP2C1-220ENST00000513636 MFSD10Q14728 455 aa10.98□□□□□ -0.65
ATP2C1-220ENST00000513636 WNT2BQ93097 391 aa10.98□□□□□ -0.65
ATP2C1-220ENST00000513636 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
ATP2C1-220ENST00000513636 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-220ENST00000513636 BHMG1C9JSJ3 638 aaPredicted RBP10.95□□□□□ -0.66
ATP2C1-220ENST00000513636 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
ATP2C1-220ENST00000513636 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
ATP2C1-220ENST00000513636 EMILIN3Q9NT22 766 aa10.93□□□□□ -0.66
ATP2C1-220ENST00000513636 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
ATP2C1-220ENST00000513636 PPP1R3GB7ZBB8 358 aa10.91□□□□□ -0.66
ATP2C1-220ENST00000513636 PCDHGA10Q9Y5H3 936 aa10.91□□□□□ -0.66
ATP2C1-220ENST00000513636 PHF14O94880 888 aa10.9□□□□□ -0.66
ATP2C1-220ENST00000513636 RGS20O76081 388 aa10.88□□□□□ -0.67
ATP2C1-220ENST00000513636 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
ATP2C1-220ENST00000513636 RABGEF1Q9UJ41 708 aa10.88□□□□□ -0.67
ATP2C1-220ENST00000513636 CADPS2Q86UW7 1296 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms