RNA–Protein interactions for RNA: ENST00000513603.1

GIN1-206, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 2

Gene GIN1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-206ENST00000513603 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
GIN1-206ENST00000513603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
GIN1-206ENST00000513603 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
GIN1-206ENST00000513603 FBXO22Q8NEZ5 403 aa11.45□□□□□ -0.58
GIN1-206ENST00000513603 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
GIN1-206ENST00000513603 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
GIN1-206ENST00000513603 SOX12O15370 315 aa11.42□□□□□ -0.58
GIN1-206ENST00000513603 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
GIN1-206ENST00000513603 PPP1R37O75864 691 aa11.41□□□□□ -0.58
GIN1-206ENST00000513603 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
GIN1-206ENST00000513603 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
GIN1-206ENST00000513603 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
GIN1-206ENST00000513603 EMP3P54852 163 aa11.37□□□□□ -0.59
GIN1-206ENST00000513603 NLRP6P59044 892 aa11.36□□□□□ -0.59
GIN1-206ENST00000513603 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
GIN1-206ENST00000513603 G3V3G9 751 aa11.31□□□□□ -0.6
GIN1-206ENST00000513603 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
GIN1-206ENST00000513603 KDM2AQ9Y2K7 1162 aa11.31□□□□□ -0.6
GIN1-206ENST00000513603 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
GIN1-206ENST00000513603 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
GIN1-206ENST00000513603 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
GIN1-206ENST00000513603 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
GIN1-206ENST00000513603 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
GIN1-206ENST00000513603 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
GIN1-206ENST00000513603 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
GIN1-206ENST00000513603 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
GIN1-206ENST00000513603 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
GIN1-206ENST00000513603 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
GIN1-206ENST00000513603 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
GIN1-206ENST00000513603 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
GIN1-206ENST00000513603 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
GIN1-206ENST00000513603 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
GIN1-206ENST00000513603 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
GIN1-206ENST00000513603 ERBB3P21860 1342 aa11.11□□□□□ -0.63
GIN1-206ENST00000513603 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
GIN1-206ENST00000513603 CRISPLD2Q9H0B8 497 aa11.08□□□□□ -0.64
GIN1-206ENST00000513603 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
GIN1-206ENST00000513603 KIF3CO14782 793 aa11.03□□□□□ -0.64
GIN1-206ENST00000513603 C2orf72A6NCS6 295 aa11.02□□□□□ -0.65
GIN1-206ENST00000513603 MFSD10Q14728 455 aa11.02□□□□□ -0.65
GIN1-206ENST00000513603 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
GIN1-206ENST00000513603 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
GIN1-206ENST00000513603 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
GIN1-206ENST00000513603 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
GIN1-206ENST00000513603 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
GIN1-206ENST00000513603 GPHNQ9NQX3 736 aaPredicted RBP10.98□□□□□ -0.65
GIN1-206ENST00000513603 DSG2Q14126 1118 aa10.97□□□□□ -0.65
GIN1-206ENST00000513603 PDE4AP27815 886 aa10.96□□□□□ -0.65
GIN1-206ENST00000513603 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
GIN1-206ENST00000513603 DDX27Q96GQ7 796 aaKnown RBP10.96□□□□□ -0.65
GIN1-206ENST00000513603 ZNF687Q8N1G0 1237 aa10.95□□□□□ -0.66
GIN1-206ENST00000513603 NBR1Q14596 966 aa10.94□□□□□ -0.66
GIN1-206ENST00000513603 PPP1R15BQ5SWA1 713 aa10.94□□□□□ -0.66
GIN1-206ENST00000513603 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
GIN1-206ENST00000513603 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
GIN1-206ENST00000513603 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
GIN1-206ENST00000513603 FOXK1P85037 733 aa10.91□□□□□ -0.66
GIN1-206ENST00000513603 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
GIN1-206ENST00000513603 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
GIN1-206ENST00000513603 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
GIN1-206ENST00000513603 EMILIN3Q9NT22 766 aa10.89□□□□□ -0.67
GIN1-206ENST00000513603 E2F4Q16254 413 aa10.88□□□□□ -0.67
GIN1-206ENST00000513603 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
GIN1-206ENST00000513603 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
GIN1-206ENST00000513603 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
GIN1-206ENST00000513603 PTGER2P43116 358 aa10.83□□□□□ -0.68
GIN1-206ENST00000513603 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
GIN1-206ENST00000513603 GTF3C3Q9Y5Q9 886 aa10.82□□□□□ -0.68
GIN1-206ENST00000513603 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
GIN1-206ENST00000513603 DPYSL4O14531 572 aa10.79□□□□□ -0.68
GIN1-206ENST00000513603 SLC34A2O95436 690 aa10.79□□□□□ -0.68
GIN1-206ENST00000513603 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
GIN1-206ENST00000513603 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
GIN1-206ENST00000513603 UPF1Q92900 1129 aaKnown RBP eCLIP10.78□□□□□ -0.68
GIN1-206ENST00000513603 LSM11P83369 360 aaKnown RBP eCLIP10.77□□□□□ -0.69
GIN1-206ENST00000513603 NUDT7P0C024 238 aa10.76□□□□□ -0.69
GIN1-206ENST00000513603 ARXQ96QS3 562 aa10.76□□□□□ -0.69
GIN1-206ENST00000513603 ARIH1Q9Y4X5 557 aaPredicted RBP10.76□□□□□ -0.69
GIN1-206ENST00000513603 PCDHGA4Q9Y5G9 962 aa10.76□□□□□ -0.69
GIN1-206ENST00000513603 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
GIN1-206ENST00000513603 PTCD2Q8WV60 388 aaKnown RBP10.75□□□□□ -0.69
GIN1-206ENST00000513603 SEMA3EO15041 775 aa10.74□□□□□ -0.69
GIN1-206ENST00000513603 PBX2P40425 430 aa10.71□□□□□ -0.69
GIN1-206ENST00000513603 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
GIN1-206ENST00000513603 PDIA6Q15084 440 aa10.69□□□□□ -0.7
GIN1-206ENST00000513603 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
GIN1-206ENST00000513603 MLLT3P42568 568 aaPredicted RBP10.68□□□□□ -0.7
GIN1-206ENST00000513603 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
GIN1-206ENST00000513603 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
GIN1-206ENST00000513603 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
GIN1-206ENST00000513603 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
GIN1-206ENST00000513603 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
GIN1-206ENST00000513603 TBC1D12O60347 775 aa10.66□□□□□ -0.7
GIN1-206ENST00000513603 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
GIN1-206ENST00000513603 EVI5O60447 810 aa10.63□□□□□ -0.71
GIN1-206ENST00000513603 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
GIN1-206ENST00000513603 PSDA5PKW4 1024 aaPredicted RBP10.58□□□□□ -0.72
GIN1-206ENST00000513603 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
GIN1-206ENST00000513603 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
GIN1-206ENST00000513603 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms