RNA–Protein interactions for RNA: ENST00000513598.5

CTNND2-216, Transcript of catenin delta 2, humanhuman

TSL 3

Gene CTNND2, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-216ENST00000513598 PCF11O94913 1555 aaKnown RBP36.07■■■■□ 3.37
CTNND2-216ENST00000513598 ZMYM4Q5VZL5 1548 aa36.07■■■■□ 3.36
CTNND2-216ENST00000513598 MADDQ8WXG6 1647 aa36.04■■■■□ 3.36
CTNND2-216ENST00000513598 SIGLEC1Q9BZZ2 1709 aa36.03■■■■□ 3.36
CTNND2-216ENST00000513598 POGZQ7Z3K3 1410 aa36.03■■■■□ 3.36
CTNND2-216ENST00000513598 ZFYVE16Q7Z3T8 1539 aa36.03■■■■□ 3.36
CTNND2-216ENST00000513598 CLIP1P30622 1438 aa36.02■■■■□ 3.36
CTNND2-216ENST00000513598 MAGI2Q86UL8 1455 aa35.99■■■■□ 3.35
CTNND2-216ENST00000513598 ARHGAP5Q13017 1502 aa35.97■■■■□ 3.35
CTNND2-216ENST00000513598 CCDC18Q5T9S5 1454 aa35.95■■■■□ 3.35
CTNND2-216ENST00000513598 CDC42BPBQ9Y5S2 1711 aa35.94■■■■□ 3.34
CTNND2-216ENST00000513598 AFAP1Q8N556 730 aa35.94■■■■□ 3.34
CTNND2-216ENST00000513598 MLECQ14165 292 aa35.93■■■■□ 3.34
CTNND2-216ENST00000513598 RIMS1Q86UR5 1692 aaKnown RBP35.92■■■■□ 3.34
CTNND2-216ENST00000513598 FYCO1Q9BQS8 1478 aa35.89■■■■□ 3.34
CTNND2-216ENST00000513598 PLPPR3Q6T4P5 718 aa35.88■■■■□ 3.33
CTNND2-216ENST00000513598 ATP10AO60312 1499 aa35.86■■■■□ 3.33
CTNND2-216ENST00000513598 ILDR1Q86SU0 546 aaPredicted RBP35.83■■■■□ 3.33
CTNND2-216ENST00000513598 ZNF518AQ6AHZ1 1483 aa35.82■■■■□ 3.32
CTNND2-216ENST00000513598 PREX2Q70Z35 1606 aa35.81■■■■□ 3.32
CTNND2-216ENST00000513598 ARHGEF12Q9NZN5 1544 aa35.8■■■■□ 3.32
CTNND2-216ENST00000513598 MYT1LQ9UL68 1186 aa35.8■■■■□ 3.32
CTNND2-216ENST00000513598 C9orf84Q5VXU9 1444 aa35.79■■■■□ 3.32
CTNND2-216ENST00000513598 KDM5CP41229 1560 aa35.79■■■■□ 3.32
CTNND2-216ENST00000513598 CDC42BPAQ5VT25 1732 aa35.78■■■■□ 3.32
CTNND2-216ENST00000513598 TRAPPC8Q9Y2L5 1435 aa35.77■■■■□ 3.32
CTNND2-216ENST00000513598 FER1L4A9Z1Z3 1794 aa35.72■■■■□ 3.31
CTNND2-216ENST00000513598 ZNF777Q9ULD5 760 aaPredicted RBP35.72■■■■□ 3.31
CTNND2-216ENST00000513598 LMTK3Q96Q04 1460 aa35.72■■■■□ 3.31
CTNND2-216ENST00000513598 ABCC1P33527 1531 aa35.72■■■■□ 3.31
CTNND2-216ENST00000513598 ITSN2Q9NZM3 1697 aa35.69■■■■□ 3.3
CTNND2-216ENST00000513598 DIP2CQ9Y2E4 1556 aa35.68■■■■□ 3.3
CTNND2-216ENST00000513598 GPATCH8Q9UKJ3 1502 aaKnown RBP35.67■■■■□ 3.3
CTNND2-216ENST00000513598 MLH3Q9UHC1 1453 aa35.67■■■■□ 3.3
CTNND2-216ENST00000513598 HSPA2P54652 639 aa35.65■■■■□ 3.3
CTNND2-216ENST00000513598 ABCA6Q8N139 1617 aa35.65■■■■□ 3.3
CTNND2-216ENST00000513598 CEBPAP49715 358 aaPredicted RBP35.63■■■■□ 3.29
CTNND2-216ENST00000513598 CEP162Q5TB80 1403 aa35.63■■■■□ 3.29
CTNND2-216ENST00000513598 HNRNPMP52272 730 aaKnown RBP eCLIP35.62■■■■□ 3.29
CTNND2-216ENST00000513598 SAMD9LQ8IVG5 1584 aa35.61■■■■□ 3.29
CTNND2-216ENST00000513598 MTUS2Q5JR59 1369 aa35.59■■■■□ 3.29
CTNND2-216ENST00000513598 KIDINS220Q9ULH0 1771 aa35.59■■■■□ 3.29
CTNND2-216ENST00000513598 LOC105371045A0A1W2PR82 267 aa35.57■■■■□ 3.28
CTNND2-216ENST00000513598 CFDP1Q9UEE9 299 aaPredicted RBP35.56■■■■□ 3.28
CTNND2-216ENST00000513598 REREQ9P2R6 1566 aa35.55■■■■□ 3.28
CTNND2-216ENST00000513598 CCNB3Q8WWL7 1395 aa35.55■■■■□ 3.28
CTNND2-216ENST00000513598 SYCP2Q9BX26 1530 aa35.53■■■■□ 3.28
CTNND2-216ENST00000513598 SPAG9O60271 1321 aaKnown RBP35.48■■■■□ 3.27
CTNND2-216ENST00000513598 AGLP35573 1532 aa35.47■■■■□ 3.27
CTNND2-216ENST00000513598 ZNF644Q9H582 1327 aaPredicted RBP35.46■■■■□ 3.27
CTNND2-216ENST00000513598 KIAA1107Q9UPP5 1409 aa35.44■■■■□ 3.26
CTNND2-216ENST00000513598 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
CTNND2-216ENST00000513598 EHBP1L1Q8N3D4 1523 aa35.41■■■■□ 3.26
CTNND2-216ENST00000513598 PLEKHH2Q8IVE3 1493 aa35.4■■■■□ 3.26
CTNND2-216ENST00000513598 SETD1BQ9UPS6 1966 aaKnown RBP35.39■■■■□ 3.26
CTNND2-216ENST00000513598 ESF1Q9H501 851 aaKnown RBP35.37■■■■□ 3.25
CTNND2-216ENST00000513598 PREX1Q8TCU6 1659 aa35.37■■■■□ 3.25
CTNND2-216ENST00000513598 C3P01024 1663 aa35.36■■■■□ 3.25
CTNND2-216ENST00000513598 SUPT6HQ7KZ85 1726 aaKnown RBP35.35■■■■□ 3.25
CTNND2-216ENST00000513598 ATP7AQ04656 1500 aa35.34■■■■□ 3.25
CTNND2-216ENST00000513598 INO80Q9ULG1 1556 aaPredicted RBP35.31■■■■□ 3.24
CTNND2-216ENST00000513598 MBD5Q9P267 1494 aa35.29■■■■□ 3.24
CTNND2-216ENST00000513598 FBXO41Q8TF61 875 aa35.29■■■■□ 3.24
CTNND2-216ENST00000513598 NCOA2Q15596 1464 aa35.27■■■■□ 3.24
CTNND2-216ENST00000513598 UHRF1BP1Q6BDS2 1440 aa35.26■■■■□ 3.24
CTNND2-216ENST00000513598 A2MP01023 1474 aa35.26■■■■□ 3.23
CTNND2-216ENST00000513598 VPS8Q8N3P4 1428 aa35.23■■■■□ 3.23
CTNND2-216ENST00000513598 CNTLNQ9NXG0 1405 aa35.23■■■■□ 3.23
CTNND2-216ENST00000513598 PLXNC1O60486 1568 aa35.21■■■■□ 3.23
CTNND2-216ENST00000513598 GGT6Q6P531 493 aa35.21■■■■□ 3.23
CTNND2-216ENST00000513598 STRCQ7RTU9 1775 aa35.2■■■■□ 3.23
CTNND2-216ENST00000513598 ZMYM3Q14202 1370 aa35.19■■■■□ 3.22
CTNND2-216ENST00000513598 KANK4Q5T7N3 995 aaPredicted RBP35.15■■■■□ 3.22
CTNND2-216ENST00000513598 ADGBQ8N7X0 1667 aa35.14■■■■□ 3.22
CTNND2-216ENST00000513598 CAMSAP2Q08AD1 1489 aa35.14■■■■□ 3.22
CTNND2-216ENST00000513598 LRRC9Q6ZRR7 1453 aa35.13■■■■□ 3.21
CTNND2-216ENST00000513598 CLTCQ00610 1675 aaKnown RBP35.13■■■■□ 3.21
CTNND2-216ENST00000513598 RTEL1-TNFRSF6BF6WH68 1400 aa35.13■■■■□ 3.21
CTNND2-216ENST00000513598 MROH2AA6NES4 1674 aa35.12■■■■□ 3.21
CTNND2-216ENST00000513598 CERKQ8TCT0 537 aa35.09■■■■□ 3.21
CTNND2-216ENST00000513598 DHX29Q7Z478 1369 aaKnown RBP35.08■■■■□ 3.21
CTNND2-216ENST00000513598 CCDC141Q6ZP82 1450 aa35.08■■■■□ 3.21
CTNND2-216ENST00000513598 DMRT2Q9Y5R5 561 aa35.06■■■■□ 3.2
CTNND2-216ENST00000513598 RSPH4AQ5TD94 716 aa35.05■■■■□ 3.2
CTNND2-216ENST00000513598 NPATQ14207 1427 aa35.05■■■■□ 3.2
CTNND2-216ENST00000513598 PPP6R1Q9UPN7 881 aa35.02■■■■□ 3.2
CTNND2-216ENST00000513598 KIF3BO15066 747 aa35.01■■■■□ 3.2
CTNND2-216ENST00000513598 PTPRKQ15262 1439 aa34.99■■■■□ 3.19
CTNND2-216ENST00000513598 MAP3K1Q13233 1512 aa34.98■■■■□ 3.19
CTNND2-216ENST00000513598 ARHGEF5Q12774 1597 aa34.96■■■■□ 3.19
CTNND2-216ENST00000513598 TSPY4P0CV99 314 aa34.96■■■■□ 3.19
CTNND2-216ENST00000513598 TSPY10P0CW01 314 aa34.96■■■■□ 3.19
CTNND2-216ENST00000513598 PTPRTO14522 1441 aa34.94■■■■□ 3.18
CTNND2-216ENST00000513598 NCOA1Q15788 1441 aa34.94■■■■□ 3.18
CTNND2-216ENST00000513598 CAMSAP1Q5T5Y3 1602 aa34.92■■■■□ 3.18
CTNND2-216ENST00000513598 NCKAP5LQ9HCH0 1330 aa34.89■■■■□ 3.18
CTNND2-216ENST00000513598 FBXO31Q5XUX0 539 aaPredicted RBP34.88■■■■□ 3.17
CTNND2-216ENST00000513598 MYO3AQ8NEV4 1616 aa34.87■■■■□ 3.17
CTNND2-216ENST00000513598 MYOM3Q5VTT5 1437 aa34.87■■■■□ 3.17
CTNND2-216ENST00000513598 MIA2Q96PC5 1412 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms