RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 MKRN3Q13064 507 aaKnown RBP7.18□□□□□ -1.26
SMAD5-208ENST00000513418 MICALL2Q8IY33 904 aa7.17□□□□□ -1.26
SMAD5-208ENST00000513418 CRISPLD2Q9H0B8 497 aa7.17□□□□□ -1.26
SMAD5-208ENST00000513418 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
SMAD5-208ENST00000513418 SCUBE2Q9NQ36 999 aa7.15□□□□□ -1.26
SMAD5-208ENST00000513418 PCDH10Q9P2E7 1040 aa7.15□□□□□ -1.26
SMAD5-208ENST00000513418 TMEM121BQ9BXQ6 578 aaPredicted RBP7.13□□□□□ -1.27
SMAD5-208ENST00000513418 LARP6Q9BRS8 491 aaKnown RBP7.12□□□□□ -1.27
SMAD5-208ENST00000513418 MFSD10Q14728 455 aa7.11□□□□□ -1.27
SMAD5-208ENST00000513418 KIF3CO14782 793 aa7.1□□□□□ -1.27
SMAD5-208ENST00000513418 DSG2Q14126 1118 aa7.1□□□□□ -1.27
SMAD5-208ENST00000513418 EMILIN3Q9NT22 766 aa7.1□□□□□ -1.27
SMAD5-208ENST00000513418 C2orf72A6NCS6 295 aa7.09□□□□□ -1.27
SMAD5-208ENST00000513418 L3MBTL3Q96JM7 780 aaPredicted RBP7.09□□□□□ -1.27
SMAD5-208ENST00000513418 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
SMAD5-208ENST00000513418 RYDENQ9NUL5 291 aaKnown RBP7.08□□□□□ -1.28
SMAD5-208ENST00000513418 BOLA1Q9Y3E2 137 aa7.08□□□□□ -1.28
SMAD5-208ENST00000513418 SLAIN1Q8ND83 568 aa7.06□□□□□ -1.28
SMAD5-208ENST00000513418 BCANQ96GW7 911 aa7.05□□□□□ -1.28
SMAD5-208ENST00000513418 GPHNQ9NQX3 736 aaPredicted RBP7.05□□□□□ -1.28
SMAD5-208ENST00000513418 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.05□□□□□ -1.28
SMAD5-208ENST00000513418 SEMA3EO15041 775 aa7.04□□□□□ -1.28
SMAD5-208ENST00000513418 CAMK2BQ13554 666 aa7.04□□□□□ -1.28
SMAD5-208ENST00000513418 PPP1R15BQ5SWA1 713 aa7.03□□□□□ -1.28
SMAD5-208ENST00000513418 FAM163AQ96GL9 167 aaPredicted RBP7.02□□□□□ -1.29
SMAD5-208ENST00000513418 DDX27Q96GQ7 796 aaKnown RBP7.02□□□□□ -1.29
SMAD5-208ENST00000513418 MLLT3P42568 568 aaPredicted RBP7.01□□□□□ -1.29
SMAD5-208ENST00000513418 E2F4Q16254 413 aa7.01□□□□□ -1.29
SMAD5-208ENST00000513418 C3orf67Q6ZVT6 689 aa7.01□□□□□ -1.29
SMAD5-208ENST00000513418 DPYSL4O14531 572 aa7□□□□□ -1.29
SMAD5-208ENST00000513418 PRIM1P49642 420 aaKnown RBP7□□□□□ -1.29
SMAD5-208ENST00000513418 TPRNQ4KMQ1 711 aa7□□□□□ -1.29
SMAD5-208ENST00000513418 PLPP6Q8IY26 295 aa7□□□□□ -1.29
SMAD5-208ENST00000513418 PDE4AP27815 886 aa6.99□□□□□ -1.29
SMAD5-208ENST00000513418 FOXK1P85037 733 aa6.99□□□□□ -1.29
SMAD5-208ENST00000513418 G3V3G9 751 aa6.96□□□□□ -1.3
SMAD5-208ENST00000513418 ST18O60284 1047 aa6.96□□□□□ -1.3
SMAD5-208ENST00000513418 UPF1Q92900 1129 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMAD5-208ENST00000513418 WDR70Q9NW82 654 aa6.96□□□□□ -1.3
SMAD5-208ENST00000513418 TESPA1A2RU30 521 aaPredicted RBP6.95□□□□□ -1.3
SMAD5-208ENST00000513418 KHSRPQ92945 711 aaKnown RBP eCLIP6.95□□□□□ -1.33e-12■■■■■ 32.9
SMAD5-208ENST00000513418 SNPHO15079 494 aa6.94□□□□□ -1.3
SMAD5-208ENST00000513418 NBR1Q14596 966 aa6.94□□□□□ -1.3
SMAD5-208ENST00000513418 TMC2Q8TDI7 906 aa6.94□□□□□ -1.3
SMAD5-208ENST00000513418 ARHGEF1Q92888 912 aaKnown RBP6.94□□□□□ -1.3
SMAD5-208ENST00000513418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMAD5-208ENST00000513418 HOXB3P14651 431 aaPredicted RBP6.92□□□□□ -1.3
SMAD5-208ENST00000513418 OXER1Q8TDS5 423 aa6.92□□□□□ -1.3
SMAD5-208ENST00000513418 ARIH1Q9Y4X5 557 aaPredicted RBP6.92□□□□□ -1.3
SMAD5-208ENST00000513418 RBM26Q5T8P6 1007 aaKnown RBP6.91□□□□□ -1.3
SMAD5-208ENST00000513418 KDM4FA0A1W2PPD8 638 aa6.9□□□□□ -1.3
SMAD5-208ENST00000513418 P3H3Q8IVL6 736 aa6.9□□□□□ -1.3
SMAD5-208ENST00000513418 PDIA6Q15084 440 aa6.89□□□□□ -1.31
SMAD5-208ENST00000513418 LMOD2Q6P5Q4 547 aa6.89□□□□□ -1.31
SMAD5-208ENST00000513418 GPR37O15354 613 aa6.88□□□□□ -1.31
SMAD5-208ENST00000513418 CDAN1Q8IWY9 1227 aa6.88□□□□□ -1.31
SMAD5-208ENST00000513418 DDX12PQ92771 950 aa6.85□□□□□ -1.31
SMAD5-208ENST00000513418 DOK7Q18PE1 504 aa6.84□□□□□ -1.31
SMAD5-208ENST00000513418 ZC3H15Q8WU90 426 aaKnown RBP6.84□□□□□ -1.31
SMAD5-208ENST00000513418 PTCD2Q8WV60 388 aaKnown RBP6.84□□□□□ -1.31
SMAD5-208ENST00000513418 HOXB1P14653 301 aaPredicted RBP6.83□□□□□ -1.32
SMAD5-208ENST00000513418 OSBPP22059 807 aa6.83□□□□□ -1.32
SMAD5-208ENST00000513418 MARVELD3Q96A59 401 aa6.83□□□□□ -1.32
SMAD5-208ENST00000513418 PCDHGA4Q9Y5G9 962 aa6.83□□□□□ -1.32
SMAD5-208ENST00000513418 POTEB3A0JP26 581 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 GRXCR2A6NFK2 248 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 EVI5O60447 810 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 FECHP22830 423 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 ARSIQ5FYB1 569 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 POTEBQ6S5H4 581 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 CDHR5Q9HBB8 845 aa6.82□□□□□ -1.32
SMAD5-208ENST00000513418 GPR153Q6NV75 609 aa6.81□□□□□ -1.32
SMAD5-208ENST00000513418 ZSWIM6Q9HCJ5 1215 aa6.81□□□□□ -1.32
SMAD5-208ENST00000513418 SLC34A2O95436 690 aa6.8□□□□□ -1.32
SMAD5-208ENST00000513418 NUDT7P0C024 238 aa6.79□□□□□ -1.32
SMAD5-208ENST00000513418 EMP3P54852 163 aa6.79□□□□□ -1.32
SMAD5-208ENST00000513418 MAP3K9P80192 1104 aa6.79□□□□□ -1.32
SMAD5-208ENST00000513418 ZNF710Q8N1W2 664 aa6.79□□□□□ -1.32
SMAD5-208ENST00000513418 TSR1Q2NL82 804 aaKnown RBP6.78□□□□□ -1.32
SMAD5-208ENST00000513418 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
SMAD5-208ENST00000513418 RIMBP2O15034 1052 aa6.77□□□□□ -1.33
SMAD5-208ENST00000513418 HS3ST6Q96QI5 342 aa6.77□□□□□ -1.33
SMAD5-208ENST00000513418 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
SMAD5-208ENST00000513418 PCDHGA10Q9Y5H3 936 aa6.77□□□□□ -1.33
SMAD5-208ENST00000513418 ZMYND10O75800 440 aa6.76□□□□□ -1.33
SMAD5-208ENST00000513418 FAM205CA6NFA0 338 aa6.75□□□□□ -1.33
SMAD5-208ENST00000513418 SPDYE16A6NNV3 312 aaPredicted RBP6.75□□□□□ -1.33
SMAD5-208ENST00000513418 C3orf80F5H4A9 247 aa6.75□□□□□ -1.33
SMAD5-208ENST00000513418 PTGER2P43116 358 aa6.75□□□□□ -1.33
SMAD5-208ENST00000513418 NPDC1Q9NQX5 325 aaPredicted RBP6.75□□□□□ -1.33
SMAD5-208ENST00000513418 MMRN1Q13201 1228 aa6.74□□□□□ -1.33
SMAD5-208ENST00000513418 POTEEQ6S8J3 1075 aa6.74□□□□□ -1.33
SMAD5-208ENST00000513418 RBM33Q96EV2 1170 aaKnown RBP6.73□□□□□ -1.33
SMAD5-208ENST00000513418 LHX6Q9UPM6 363 aa6.73□□□□□ -1.33
SMAD5-208ENST00000513418 FAM161AQ3B820 660 aa6.72□□□□□ -1.33
SMAD5-208ENST00000513418 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
SMAD5-208ENST00000513418 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
SMAD5-208ENST00000513418 ADAM33Q9BZ11 813 aa6.72□□□□□ -1.33
SMAD5-208ENST00000513418 FOSBP53539 338 aa6.71□□□□□ -1.34
SMAD5-208ENST00000513418 GPIHBP1Q8IV16 184 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms