RNA–Protein interactions for RNA: ENST00000513344.1

USP45-213, Transcript of ubiquitin specific peptidase 45, humanhuman

TSL 3

Gene USP45, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP45-213ENST00000513344 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
USP45-213ENST00000513344 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
USP45-213ENST00000513344 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
USP45-213ENST00000513344 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
USP45-213ENST00000513344 PPP1R37O75864 691 aa13.29□□□□□ -0.28
USP45-213ENST00000513344 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
USP45-213ENST00000513344 ERBB3P21860 1342 aa13.26□□□□□ -0.29
USP45-213ENST00000513344 C2orf72A6NCS6 295 aa13.25□□□□□ -0.29
USP45-213ENST00000513344 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
USP45-213ENST00000513344 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
USP45-213ENST00000513344 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
USP45-213ENST00000513344 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
USP45-213ENST00000513344 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
USP45-213ENST00000513344 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
USP45-213ENST00000513344 KIF3CO14782 793 aa13.16□□□□□ -0.3
USP45-213ENST00000513344 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
USP45-213ENST00000513344 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
USP45-213ENST00000513344 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
USP45-213ENST00000513344 SPNS2Q8IVW8 549 aa13.11□□□□□ -0.31
USP45-213ENST00000513344 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
USP45-213ENST00000513344 KRTAP3-3Q9BYR6 98 aa13.1□□□□□ -0.31
USP45-213ENST00000513344 KRTAP3-2Q9BYR7 98 aa13.1□□□□□ -0.31
USP45-213ENST00000513344 NUDT7P0C024 238 aa13.07□□□□□ -0.32
USP45-213ENST00000513344 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
USP45-213ENST00000513344 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
USP45-213ENST00000513344 ZNF316A6NFI3 1004 aaPredicted RBP13.04□□□□□ -0.32
USP45-213ENST00000513344 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
USP45-213ENST00000513344 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
USP45-213ENST00000513344 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
USP45-213ENST00000513344 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
USP45-213ENST00000513344 SLC34A2O95436 690 aa13□□□□□ -0.33
USP45-213ENST00000513344 FOXK1P85037 733 aa12.99□□□□□ -0.33
USP45-213ENST00000513344 DSG2Q14126 1118 aa12.99□□□□□ -0.33
USP45-213ENST00000513344 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
USP45-213ENST00000513344 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
USP45-213ENST00000513344 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
USP45-213ENST00000513344 TBC1D12O60347 775 aa12.92□□□□□ -0.34
USP45-213ENST00000513344 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
USP45-213ENST00000513344 PDE4AP27815 886 aa12.9□□□□□ -0.34
USP45-213ENST00000513344 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
USP45-213ENST00000513344 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
USP45-213ENST00000513344 CRISPLD2Q9H0B8 497 aa12.88□□□□□ -0.35
USP45-213ENST00000513344 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
USP45-213ENST00000513344 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
USP45-213ENST00000513344 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
USP45-213ENST00000513344 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
USP45-213ENST00000513344 LSM11P83369 360 aaKnown RBP eCLIP12.82□□□□□ -0.36
USP45-213ENST00000513344 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
USP45-213ENST00000513344 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
USP45-213ENST00000513344 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
USP45-213ENST00000513344 MYT1LQ9UL68 1186 aa12.81□□□□□ -0.36
USP45-213ENST00000513344 RNF166Q96A37 237 aaPredicted RBP12.8□□□□□ -0.36
USP45-213ENST00000513344 PBX2P40425 430 aa12.79□□□□□ -0.36
USP45-213ENST00000513344 OXER1Q8TDS5 423 aa12.78□□□□□ -0.36
USP45-213ENST00000513344 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
USP45-213ENST00000513344 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
USP45-213ENST00000513344 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
USP45-213ENST00000513344 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
USP45-213ENST00000513344 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
USP45-213ENST00000513344 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
USP45-213ENST00000513344 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
USP45-213ENST00000513344 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
USP45-213ENST00000513344 PTGER2P43116 358 aa12.72□□□□□ -0.37
USP45-213ENST00000513344 PSEN2P49810 448 aa12.72□□□□□ -0.37
USP45-213ENST00000513344 ZNF454Q8N9F8 522 aa12.72□□□□□ -0.37
USP45-213ENST00000513344 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
USP45-213ENST00000513344 EVI5O60447 810 aa12.69□□□□□ -0.38
USP45-213ENST00000513344 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
USP45-213ENST00000513344 MFSD10Q14728 455 aa12.68□□□□□ -0.38
USP45-213ENST00000513344 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
USP45-213ENST00000513344 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
USP45-213ENST00000513344 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
USP45-213ENST00000513344 ADGRD1Q6QNK2 874 aa12.66□□□□□ -0.38
USP45-213ENST00000513344 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
USP45-213ENST00000513344 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
USP45-213ENST00000513344 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
USP45-213ENST00000513344 FOSBP53539 338 aa12.6□□□□□ -0.39
USP45-213ENST00000513344 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
USP45-213ENST00000513344 TK2O00142 265 aa12.57□□□□□ -0.4
USP45-213ENST00000513344 PTPREP23469 700 aa12.56□□□□□ -0.4
USP45-213ENST00000513344 ZDHHC16Q969W1 377 aa12.56□□□□□ -0.4
USP45-213ENST00000513344 JPH4Q96JJ6 628 aa12.56□□□□□ -0.4
USP45-213ENST00000513344 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
USP45-213ENST00000513344 DPYSL4O14531 572 aa12.54□□□□□ -0.4
USP45-213ENST00000513344 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
USP45-213ENST00000513344 HRO43593 1189 aa12.51□□□□□ -0.41
USP45-213ENST00000513344 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
USP45-213ENST00000513344 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
USP45-213ENST00000513344 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
USP45-213ENST00000513344 CAMK2BQ13554 666 aa12.49□□□□□ -0.41
USP45-213ENST00000513344 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
USP45-213ENST00000513344 HCSTQ9UBK5 93 aa12.46□□□□□ -0.41
USP45-213ENST00000513344 GOLGA8CPA6NN73 597 aa12.45□□□□□ -0.42
USP45-213ENST00000513344 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
USP45-213ENST00000513344 PHF14O94880 888 aa12.44□□□□□ -0.42
USP45-213ENST00000513344 DDX12PQ92771 950 aa12.44□□□□□ -0.42
USP45-213ENST00000513344 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
USP45-213ENST00000513344 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
USP45-213ENST00000513344 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
USP45-213ENST00000513344 E2F4Q16254 413 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms