RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ABCA10Q8WWZ4 1543 aa8.99□□□□□ -0.97
HTT-211ENST00000513326 TSPYL2Q9H2G4 693 aaPredicted RBP8.98□□□□□ -0.97
HTT-211ENST00000513326 ABCC10Q5T3U5 1492 aa8.97□□□□□ -0.97
HTT-211ENST00000513326 FAM69CQ0P6D2 419 aa8.97□□□□□ -0.97
HTT-211ENST00000513326 PIP4P2Q8N4L2 257 aa8.97□□□□□ -0.97
HTT-211ENST00000513326 DIP2BQ9P265 1576 aa8.97□□□□□ -0.97
HTT-211ENST00000513326 KDM6BO15054 1643 aa8.95□□□□□ -0.98
HTT-211ENST00000513326 SGIP1Q9BQI5 828 aa8.95□□□□□ -0.98
HTT-211ENST00000513326 PRG4Q92954 1404 aaPredicted RBP8.95□□□□□ -0.98
HTT-211ENST00000513326 STK25O00506 426 aa8.94□□□□□ -0.98
HTT-211ENST00000513326 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
HTT-211ENST00000513326 ADCY10Q96PN6 1610 aa8.93□□□□□ -0.98
HTT-211ENST00000513326 TSPOAP1O95153 1857 aa8.93□□□□□ -0.98
HTT-211ENST00000513326 MAPKBP1O60336 1514 aa8.92□□□□□ -0.98
HTT-211ENST00000513326 PAK3O75914 559 aaPredicted RBP8.92□□□□□ -0.98
HTT-211ENST00000513326 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
HTT-211ENST00000513326 ZNF467Q7Z7K2 595 aaPredicted RBP8.91□□□□□ -0.98
HTT-211ENST00000513326 CCDC61Q9Y6R9 512 aa8.91□□□□□ -0.98
HTT-211ENST00000513326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.9□□□□□ -0.98
HTT-211ENST00000513326 ZFP91Q96JP5 570 aaPredicted RBP8.9□□□□□ -0.98
HTT-211ENST00000513326 HECW2Q9P2P5 1572 aa8.9□□□□□ -0.99
HTT-211ENST00000513326 ADGRL1O94910 1474 aa8.89□□□□□ -0.99
HTT-211ENST00000513326 RUSC2Q8N2Y8 1516 aa8.89□□□□□ -0.99
HTT-211ENST00000513326 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
HTT-211ENST00000513326 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
HTT-211ENST00000513326 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
HTT-211ENST00000513326 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
HTT-211ENST00000513326 PPRC1Q5VV67 1664 aaKnown RBP8.86□□□□□ -0.99
HTT-211ENST00000513326 WRNQ14191 1432 aaPredicted RBP eCLIP8.86□□□□□ -0.99
HTT-211ENST00000513326 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
HTT-211ENST00000513326 COL17A1Q9UMD9 1497 aaPredicted RBP8.84□□□□□ -0.99
HTT-211ENST00000513326 PDAP1Q13442 181 aaKnown RBP8.84□□□□□ -0.99
HTT-211ENST00000513326 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
HTT-211ENST00000513326 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
HTT-211ENST00000513326 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
HTT-211ENST00000513326 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
HTT-211ENST00000513326 KDM2AQ9Y2K7 1162 aa8.83□□□□□ -1
HTT-211ENST00000513326 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
HTT-211ENST00000513326 TOP2BQ02880 1626 aa8.83□□□□□ -1
HTT-211ENST00000513326 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
HTT-211ENST00000513326 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
HTT-211ENST00000513326 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
HTT-211ENST00000513326 KIF12Q96FN5 646 aa8.8□□□□□ -1
HTT-211ENST00000513326 ZRANB1Q9UGI0 708 aa8.8□□□□□ -1
HTT-211ENST00000513326 MAP3K13O43283 966 aa8.79□□□□□ -1
HTT-211ENST00000513326 PSEN1P49768 467 aa8.79□□□□□ -1
HTT-211ENST00000513326 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
HTT-211ENST00000513326 IFNL1Q8IU54 200 aa8.78□□□□□ -1
HTT-211ENST00000513326 ASXL2Q76L83 1435 aa8.77□□□□□ -1.01
HTT-211ENST00000513326 ABCC2Q92887 1545 aa8.75□□□□□ -1.01
HTT-211ENST00000513326 GLI2P10070 1586 aa8.75□□□□□ -1.01
HTT-211ENST00000513326 BCANQ96GW7 911 aa8.75□□□□□ -1.01
HTT-211ENST00000513326 CUL7Q14999 1698 aa8.75□□□□□ -1.01
HTT-211ENST00000513326 KIAA0586Q9BVV6 1533 aa8.75□□□□□ -1.01
HTT-211ENST00000513326 MAP3K4Q9Y6R4 1608 aa8.73□□□□□ -1.01
HTT-211ENST00000513326 PTPRGP23470 1445 aa8.73□□□□□ -1.01
HTT-211ENST00000513326 C19orf67A6NJJ6 358 aa8.73□□□□□ -1.01
HTT-211ENST00000513326 FBXO41Q8TF61 875 aa8.73□□□□□ -1.01
HTT-211ENST00000513326 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
HTT-211ENST00000513326 EPRSP07814 1512 aaKnown RBP8.71□□□□□ -1.01
HTT-211ENST00000513326 PLB1Q6P1J6 1458 aa8.7□□□□□ -1.02
HTT-211ENST00000513326 IGF1RP08069 1367 aa8.69□□□□□ -1.02
HTT-211ENST00000513326 TNIKQ9UKE5 1360 aa8.68□□□□□ -1.02
HTT-211ENST00000513326 UHRF1BP1LA0JNW5 1464 aa8.68□□□□□ -1.02
HTT-211ENST00000513326 KIF21BO75037 1637 aa8.68□□□□□ -1.02
HTT-211ENST00000513326 MFRPQ9BY79 579 aa8.67□□□□□ -1.02
HTT-211ENST00000513326 CABP2Q9NPB3 220 aa8.67□□□□□ -1.02
HTT-211ENST00000513326 ZCCHC11Q5TAX3 1644 aaKnown RBP8.66□□□□□ -1.02
HTT-211ENST00000513326 DISP1Q96F81 1524 aa8.66□□□□□ -1.02
HTT-211ENST00000513326 UACAQ9BZF9 1416 aa8.66□□□□□ -1.02
HTT-211ENST00000513326 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
HTT-211ENST00000513326 SOX12O15370 315 aa8.66□□□□□ -1.02
HTT-211ENST00000513326 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
HTT-211ENST00000513326 KDM5BQ9UGL1 1544 aa8.65□□□□□ -1.02
HTT-211ENST00000513326 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
HTT-211ENST00000513326 NLRP6P59044 892 aa8.64□□□□□ -1.03
HTT-211ENST00000513326 LMTK3Q96Q04 1460 aa8.64□□□□□ -1.03
HTT-211ENST00000513326 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
HTT-211ENST00000513326 MS4A3Q96HJ5 214 aa8.63□□□□□ -1.03
HTT-211ENST00000513326 IQGAP2Q13576 1575 aa8.63□□□□□ -1.03
HTT-211ENST00000513326 GOLGA2Q08379 1002 aa8.62□□□□□ -1.03
HTT-211ENST00000513326 TMEM106CQ9BVX2 250 aa8.62□□□□□ -1.03
HTT-211ENST00000513326 WDR7Q9Y4E6 1490 aa8.62□□□□□ -1.03
HTT-211ENST00000513326 CARMIL2Q6F5E8 1435 aa8.62□□□□□ -1.03
HTT-211ENST00000513326 HAX1O00165 279 aa8.61□□□□□ -1.03
HTT-211ENST00000513326 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
HTT-211ENST00000513326 PTPRMP28827 1452 aa8.61□□□□□ -1.03
HTT-211ENST00000513326 KIF27Q86VH2 1401 aa8.61□□□□□ -1.03
HTT-211ENST00000513326 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
HTT-211ENST00000513326 ADAMTSL3P82987 1691 aa8.6□□□□□ -1.03
HTT-211ENST00000513326 CLCN6P51797 869 aa8.6□□□□□ -1.03
HTT-211ENST00000513326 PHF8Q9UPP1 1060 aa8.6□□□□□ -1.03
HTT-211ENST00000513326 MAGI3Q5TCQ9 1506 aa8.59□□□□□ -1.03
HTT-211ENST00000513326 KIAA0556O60303 1618 aa8.58□□□□□ -1.04
HTT-211ENST00000513326 PCF11O94913 1555 aaKnown RBP8.58□□□□□ -1.04
HTT-211ENST00000513326 CD109Q6YHK3 1445 aa8.58□□□□□ -1.04
HTT-211ENST00000513326 TIE1P35590 1138 aa8.58□□□□□ -1.04
HTT-211ENST00000513326 TRPC6Q9Y210 931 aa8.58□□□□□ -1.04
HTT-211ENST00000513326 UGGT2Q9NYU1 1516 aa8.57□□□□□ -1.04
HTT-211ENST00000513326 MADDQ8WXG6 1647 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms