RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
TRIO-221ENST00000513206 PTMAP06454 111 aaKnown RBP20.66■□□□□ 0.9
TRIO-221ENST00000513206 MS4A1P11836 297 aa20.66■□□□□ 0.9
TRIO-221ENST00000513206 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
TRIO-221ENST00000513206 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
TRIO-221ENST00000513206 RGS3P49796 1198 aa20.6■□□□□ 0.89
TRIO-221ENST00000513206 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
TRIO-221ENST00000513206 DNTTIP2Q5QJE6 756 aaKnown RBP20.6■□□□□ 0.89
TRIO-221ENST00000513206 SOGA1O94964 1423 aa20.58■□□□□ 0.89
TRIO-221ENST00000513206 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
TRIO-221ENST00000513206 HDGFL2Q7Z4V5 671 aaPredicted RBP20.57■□□□□ 0.88
TRIO-221ENST00000513206 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
TRIO-221ENST00000513206 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
TRIO-221ENST00000513206 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
TRIO-221ENST00000513206 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
TRIO-221ENST00000513206 ROCK2O75116 1388 aaKnown RBP20.53■□□□□ 0.88
TRIO-221ENST00000513206 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.87
TRIO-221ENST00000513206 CCDC9Q9Y3X0 531 aaKnown RBP20.51■□□□□ 0.87
TRIO-221ENST00000513206 CLSTN1O94985 981 aa20.51■□□□□ 0.87
TRIO-221ENST00000513206 TMX4Q9H1E5 349 aaPredicted RBP20.51■□□□□ 0.87
TRIO-221ENST00000513206 FOXD1Q16676 465 aa20.49■□□□□ 0.87
TRIO-221ENST00000513206 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
TRIO-221ENST00000513206 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
TRIO-221ENST00000513206 MCCP23508 829 aa20.48■□□□□ 0.87
TRIO-221ENST00000513206 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
TRIO-221ENST00000513206 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
TRIO-221ENST00000513206 TSHZ2Q9NRE2 1034 aa20.48■□□□□ 0.87
TRIO-221ENST00000513206 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
TRIO-221ENST00000513206 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
TRIO-221ENST00000513206 PKD2Q13563 968 aa20.47■□□□□ 0.87
TRIO-221ENST00000513206 L1TD1Q5T7N2 865 aaKnown RBP20.47■□□□□ 0.87
TRIO-221ENST00000513206 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
TRIO-221ENST00000513206 GOLGA6L4A6NEF3 574 aa20.45■□□□□ 0.86
TRIO-221ENST00000513206 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
TRIO-221ENST00000513206 EFCAB2Q5VUJ9 269 aa20.44■□□□□ 0.86
TRIO-221ENST00000513206 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
TRIO-221ENST00000513206 GNL2Q13823 731 aaKnown RBP20.43■□□□□ 0.86
TRIO-221ENST00000513206 KTN1Q86UP2 1357 aaKnown RBP20.43■□□□□ 0.86
TRIO-221ENST00000513206 EIF3AQ14152 1382 aaKnown RBP20.43■□□□□ 0.86
TRIO-221ENST00000513206 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
TRIO-221ENST00000513206 NUP155O75694 1391 aa20.41■□□□□ 0.86
TRIO-221ENST00000513206 SPAG9O60271 1321 aaKnown RBP20.41■□□□□ 0.86
TRIO-221ENST00000513206 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
TRIO-221ENST00000513206 KIAA1211Q6ZU35 1233 aa20.4■□□□□ 0.86
TRIO-221ENST00000513206 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
TRIO-221ENST00000513206 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
TRIO-221ENST00000513206 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.86
TRIO-221ENST00000513206 APBB1O00213 710 aa20.39■□□□□ 0.86
TRIO-221ENST00000513206 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
TRIO-221ENST00000513206 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.85
TRIO-221ENST00000513206 IPO8O15397 1037 aaKnown RBP20.38■□□□□ 0.85
TRIO-221ENST00000513206 CHMP3Q9Y3E7 222 aa20.38■□□□□ 0.85
TRIO-221ENST00000513206 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
TRIO-221ENST00000513206 KIF3BO15066 747 aa20.38■□□□□ 0.85
TRIO-221ENST00000513206 VSIG10Q8N0Z9 540 aa20.38■□□□□ 0.85
TRIO-221ENST00000513206 NRDCO43847 1150 aa20.38■□□□□ 0.85
TRIO-221ENST00000513206 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
TRIO-221ENST00000513206 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
TRIO-221ENST00000513206 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRIO-221ENST00000513206 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
TRIO-221ENST00000513206 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
TRIO-221ENST00000513206 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.852e-6■■■□□ 18.9
TRIO-221ENST00000513206 TAF7LQ5H9L4 462 aa20.35■□□□□ 0.85
TRIO-221ENST00000513206 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
TRIO-221ENST00000513206 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
TRIO-221ENST00000513206 G3V3G9 751 aa20.35■□□□□ 0.85
TRIO-221ENST00000513206 DCAF8Q5TAQ9 597 aa20.35■□□□□ 0.85
TRIO-221ENST00000513206 MSNP26038 577 aaKnown RBP20.34■□□□□ 0.85
TRIO-221ENST00000513206 GORABQ5T7V8 394 aa20.32■□□□□ 0.84
TRIO-221ENST00000513206 NUTM2DQ5VT03 806 aaPredicted RBP20.32■□□□□ 0.84
TRIO-221ENST00000513206 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
TRIO-221ENST00000513206 TERF2IPQ9NYB0 399 aa20.31■□□□□ 0.84
TRIO-221ENST00000513206 SPRYD3Q8NCJ5 442 aa20.3■□□□□ 0.84
TRIO-221ENST00000513206 GPATCH3Q96I76 525 aa20.29■□□□□ 0.84
TRIO-221ENST00000513206 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
TRIO-221ENST00000513206 DRC7Q8IY82 874 aa20.28■□□□□ 0.84
TRIO-221ENST00000513206 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
TRIO-221ENST00000513206 AMPHP49418 695 aa20.28■□□□□ 0.84
TRIO-221ENST00000513206 NUTM2FA1L443 756 aa20.28■□□□□ 0.84
TRIO-221ENST00000513206 ITPRIPQ8IWB1 547 aa20.28■□□□□ 0.84
TRIO-221ENST00000513206 STK31Q9BXU1 1019 aa20.27■□□□□ 0.83
TRIO-221ENST00000513206 PKNOX2Q96KN3 472 aa20.26■□□□□ 0.83
TRIO-221ENST00000513206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■■■□□ 15.1
TRIO-221ENST00000513206 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
TRIO-221ENST00000513206 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
TRIO-221ENST00000513206 CHAF1AQ13111 956 aaPredicted RBP20.23■□□□□ 0.83
TRIO-221ENST00000513206 RAB3GAP2Q9H2M9 1393 aa20.23■□□□□ 0.83
TRIO-221ENST00000513206 EVA1CP58658 441 aa20.23■□□□□ 0.83
TRIO-221ENST00000513206 RAPGEF2Q9Y4G8 1499 aa20.22■□□□□ 0.83
TRIO-221ENST00000513206 KANK4Q5T7N3 995 aaPredicted RBP20.21■□□□□ 0.83
TRIO-221ENST00000513206 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
TRIO-221ENST00000513206 GTF2E1P29083 439 aaPredicted RBP20.21■□□□□ 0.83
TRIO-221ENST00000513206 RALBP1Q15311 655 aa20.21■□□□□ 0.83
TRIO-221ENST00000513206 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
TRIO-221ENST00000513206 JPH4Q96JJ6 628 aa20.2■□□□□ 0.82
TRIO-221ENST00000513206 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
TRIO-221ENST00000513206 KIAA2012Q0VF49 1180 aa20.19■□□□□ 0.82
TRIO-221ENST00000513206 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
TRIO-221ENST00000513206 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
TRIO-221ENST00000513206 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms