RNA–Protein interactions for RNA: ENST00000513178.1

CNGA1-206, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 3

Gene CNGA1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-206ENST00000513178 PHLDB1Q86UU1 1377 aa25.53■■□□□ 1.68
CNGA1-206ENST00000513178 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
CNGA1-206ENST00000513178 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
CNGA1-206ENST00000513178 RICTORQ6R327 1708 aa25.52■■□□□ 1.68
CNGA1-206ENST00000513178 ADGRL1O94910 1474 aa25.5■■□□□ 1.67
CNGA1-206ENST00000513178 GPATCH8Q9UKJ3 1502 aaKnown RBP25.47■■□□□ 1.67
CNGA1-206ENST00000513178 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
CNGA1-206ENST00000513178 CCNB3Q8WWL7 1395 aa25.46■■□□□ 1.67
CNGA1-206ENST00000513178 EFCAB2Q5VUJ9 269 aa25.46■■□□□ 1.67
CNGA1-206ENST00000513178 DENND4BO75064 1496 aaPredicted RBP25.46■■□□□ 1.67
CNGA1-206ENST00000513178 APLP2Q06481 763 aa25.45■■□□□ 1.66
CNGA1-206ENST00000513178 SAMD9LQ8IVG5 1584 aa25.44■■□□□ 1.66
CNGA1-206ENST00000513178 ABCC1P33527 1531 aa25.44■■□□□ 1.66
CNGA1-206ENST00000513178 RAPGEF3O95398 923 aa25.44■■□□□ 1.66
CNGA1-206ENST00000513178 KANK4Q5T7N3 995 aaPredicted RBP25.43■■□□□ 1.66
CNGA1-206ENST00000513178 SCAPERQ9BY12 1400 aa25.42■■□□□ 1.66
CNGA1-206ENST00000513178 POGZQ7Z3K3 1410 aa25.41■■□□□ 1.66
CNGA1-206ENST00000513178 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
CNGA1-206ENST00000513178 ZNF777Q9ULD5 760 aaPredicted RBP25.37■■□□□ 1.65
CNGA1-206ENST00000513178 SYCP2Q9BX26 1530 aa25.37■■□□□ 1.65
CNGA1-206ENST00000513178 ARHGEF40Q8TER5 1519 aa25.36■■□□□ 1.65
CNGA1-206ENST00000513178 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
CNGA1-206ENST00000513178 ARHGEF12Q9NZN5 1544 aa25.35■■□□□ 1.65
CNGA1-206ENST00000513178 ZNF518AQ6AHZ1 1483 aa25.33■■□□□ 1.65
CNGA1-206ENST00000513178 KDM5CP41229 1560 aa25.32■■□□□ 1.64
CNGA1-206ENST00000513178 ZFYVE16Q7Z3T8 1539 aa25.31■■□□□ 1.64
CNGA1-206ENST00000513178 HECW2Q9P2P5 1572 aa25.3■■□□□ 1.64
CNGA1-206ENST00000513178 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
CNGA1-206ENST00000513178 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
CNGA1-206ENST00000513178 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
CNGA1-206ENST00000513178 MYOM3Q5VTT5 1437 aa25.26■■□□□ 1.63
CNGA1-206ENST00000513178 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
CNGA1-206ENST00000513178 YEATS2Q9ULM3 1422 aa25.25■■□□□ 1.63
CNGA1-206ENST00000513178 MAGI2Q86UL8 1455 aa25.24■■□□□ 1.63
CNGA1-206ENST00000513178 AFAP1Q8N556 730 aa25.24■■□□□ 1.63
CNGA1-206ENST00000513178 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
CNGA1-206ENST00000513178 ABCA6Q8N139 1617 aa25.22■■□□□ 1.63
CNGA1-206ENST00000513178 SIGLEC1Q9BZZ2 1709 aa25.21■■□□□ 1.63
CNGA1-206ENST00000513178 HNRNPMP52272 730 aaKnown RBP eCLIP25.21■■□□□ 1.63
CNGA1-206ENST00000513178 KIDINS220Q9ULH0 1771 aa25.21■■□□□ 1.63
CNGA1-206ENST00000513178 DIP2CQ9Y2E4 1556 aa25.19■■□□□ 1.62
CNGA1-206ENST00000513178 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
CNGA1-206ENST00000513178 PTPN23Q9H3S7 1636 aa25.18■■□□□ 1.62
CNGA1-206ENST00000513178 MBD5Q9P267 1494 aa25.17■■□□□ 1.62
CNGA1-206ENST00000513178 MYT1LQ9UL68 1186 aa25.17■■□□□ 1.62
CNGA1-206ENST00000513178 MIA2Q96PC5 1412 aa25.17■■□□□ 1.62
CNGA1-206ENST00000513178 MLH3Q9UHC1 1453 aa25.16■■□□□ 1.62
CNGA1-206ENST00000513178 ATP7AQ04656 1500 aa25.15■■□□□ 1.62
CNGA1-206ENST00000513178 ARHGEF5Q12774 1597 aa25.14■■□□□ 1.62
CNGA1-206ENST00000513178 PPARGC1BQ86YN6 1023 aaKnown RBP25.14■■□□□ 1.62
CNGA1-206ENST00000513178 CCDC141Q6ZP82 1450 aa25.14■■□□□ 1.61
CNGA1-206ENST00000513178 FGD6Q6ZV73 1430 aa25.13■■□□□ 1.61
CNGA1-206ENST00000513178 BCORL1Q5H9F3 1711 aa25.12■■□□□ 1.61
CNGA1-206ENST00000513178 C9orf84Q5VXU9 1444 aa25.12■■□□□ 1.61
CNGA1-206ENST00000513178 ATP10AO60312 1499 aa25.11■■□□□ 1.61
CNGA1-206ENST00000513178 SPAG9O60271 1321 aaKnown RBP25.11■■□□□ 1.61
CNGA1-206ENST00000513178 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
CNGA1-206ENST00000513178 ARID4BQ4LE39 1312 aaPredicted RBP25.08■■□□□ 1.6
CNGA1-206ENST00000513178 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
CNGA1-206ENST00000513178 REREQ9P2R6 1566 aa25.07■■□□□ 1.6
CNGA1-206ENST00000513178 KDM4FA0A1W2PPD8 638 aa25.06■■□□□ 1.6
CNGA1-206ENST00000513178 TCOF1Q13428 1488 aaKnown RBP25.06■■□□□ 1.6
CNGA1-206ENST00000513178 ADAMTSL3P82987 1691 aa25.04■■□□□ 1.6
CNGA1-206ENST00000513178 DNMT1P26358 1616 aaKnown RBP25.04■■□□□ 1.6
CNGA1-206ENST00000513178 MADDQ8WXG6 1647 aa25.02■■□□□ 1.6
CNGA1-206ENST00000513178 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
CNGA1-206ENST00000513178 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
CNGA1-206ENST00000513178 PLXNC1O60486 1568 aa25■■□□□ 1.59
CNGA1-206ENST00000513178 RTEL1-TNFRSF6BF6WH68 1400 aa24.99■■□□□ 1.59
CNGA1-206ENST00000513178 RIMS1Q86UR5 1692 aaKnown RBP24.98■■□□□ 1.59
CNGA1-206ENST00000513178 RSPH4AQ5TD94 716 aa24.97■■□□□ 1.59
CNGA1-206ENST00000513178 A2MP01023 1474 aa24.96■■□□□ 1.59
CNGA1-206ENST00000513178 DAPK1P53355 1430 aa24.95■■□□□ 1.59
CNGA1-206ENST00000513178 MLECQ14165 292 aa24.95■■□□□ 1.58
CNGA1-206ENST00000513178 AGLP35573 1532 aa24.95■■□□□ 1.58
CNGA1-206ENST00000513178 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.58
CNGA1-206ENST00000513178 ABCC5O15440 1437 aa24.95■■□□□ 1.58
CNGA1-206ENST00000513178 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
CNGA1-206ENST00000513178 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
CNGA1-206ENST00000513178 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
CNGA1-206ENST00000513178 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
CNGA1-206ENST00000513178 PTPRMP28827 1452 aa24.84■■□□□ 1.57
CNGA1-206ENST00000513178 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
CNGA1-206ENST00000513178 RRBP1Q9P2E9 1410 aaKnown RBP24.81■■□□□ 1.56
CNGA1-206ENST00000513178 CHIC2Q9UKJ5 165 aa24.81■■□□□ 1.56
CNGA1-206ENST00000513178 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
CNGA1-206ENST00000513178 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
CNGA1-206ENST00000513178 CLTCQ00610 1675 aaKnown RBP24.8■■□□□ 1.56
CNGA1-206ENST00000513178 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
CNGA1-206ENST00000513178 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
CNGA1-206ENST00000513178 RNF17Q9BXT8 1623 aaKnown RBP24.77■■□□□ 1.56
CNGA1-206ENST00000513178 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
CNGA1-206ENST00000513178 ANKRD30AQ9BXX3 1397 aa24.76■■□□□ 1.55
CNGA1-206ENST00000513178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.55
CNGA1-206ENST00000513178 C3P01024 1663 aa24.75■■□□□ 1.55
CNGA1-206ENST00000513178 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
CNGA1-206ENST00000513178 RRP7BPQ9NSQ0 103 aa24.75■■□□□ 1.55
CNGA1-206ENST00000513178 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
CNGA1-206ENST00000513178 KIF3BO15066 747 aa24.74■■□□□ 1.55
CNGA1-206ENST00000513178 ITGAEP38570 1179 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms