RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 PPARGC1BQ86YN6 1023 aaKnown RBP16.2■□□□□ 0.18
PTPN20-227ENST00000513159 NEO1Q92859 1461 aa16.2■□□□□ 0.18
PTPN20-227ENST00000513159 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
PTPN20-227ENST00000513159 PHLDB1Q86UU1 1377 aa16.19■□□□□ 0.18
PTPN20-227ENST00000513159 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
PTPN20-227ENST00000513159 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
PTPN20-227ENST00000513159 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
PTPN20-227ENST00000513159 AKNAQ7Z591 1439 aa16.18■□□□□ 0.18
PTPN20-227ENST00000513159 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
PTPN20-227ENST00000513159 KDM6BO15054 1643 aa16.17■□□□□ 0.18
PTPN20-227ENST00000513159 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
PTPN20-227ENST00000513159 FRMPD1Q5SYB0 1578 aa16.16■□□□□ 0.18
PTPN20-227ENST00000513159 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
PTPN20-227ENST00000513159 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
PTPN20-227ENST00000513159 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
PTPN20-227ENST00000513159 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
PTPN20-227ENST00000513159 ABCC1P33527 1531 aa16.14■□□□□ 0.17
PTPN20-227ENST00000513159 ADGRL1O94910 1474 aa16.13■□□□□ 0.17
PTPN20-227ENST00000513159 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
PTPN20-227ENST00000513159 SCAPERQ9BY12 1400 aa16.11■□□□□ 0.17
PTPN20-227ENST00000513159 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
PTPN20-227ENST00000513159 RAPGEF3O95398 923 aa16.09■□□□□ 0.17
PTPN20-227ENST00000513159 ZNF777Q9ULD5 760 aaPredicted RBP16.09■□□□□ 0.17
PTPN20-227ENST00000513159 TRAPPC8Q9Y2L5 1435 aa16.09■□□□□ 0.17
PTPN20-227ENST00000513159 CAMSAP2Q08AD1 1489 aa16.09■□□□□ 0.17
PTPN20-227ENST00000513159 MBD5Q9P267 1494 aa16.09■□□□□ 0.17
PTPN20-227ENST00000513159 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
PTPN20-227ENST00000513159 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
PTPN20-227ENST00000513159 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-227ENST00000513159 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.16
PTPN20-227ENST00000513159 POGZQ7Z3K3 1410 aa16.07■□□□□ 0.16
PTPN20-227ENST00000513159 KDM5CP41229 1560 aa16.06■□□□□ 0.16
PTPN20-227ENST00000513159 TCOF1Q13428 1488 aaKnown RBP16.06■□□□□ 0.16
PTPN20-227ENST00000513159 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
PTPN20-227ENST00000513159 HNRNPMP52272 730 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTPN20-227ENST00000513159 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
PTPN20-227ENST00000513159 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
PTPN20-227ENST00000513159 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
PTPN20-227ENST00000513159 KIDINS220Q9ULH0 1771 aa16.03■□□□□ 0.16
PTPN20-227ENST00000513159 ARHGEF5Q12774 1597 aa16.02■□□□□ 0.16
PTPN20-227ENST00000513159 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.15
PTPN20-227ENST00000513159 YEATS2Q9ULM3 1422 aa16■□□□□ 0.15
PTPN20-227ENST00000513159 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
PTPN20-227ENST00000513159 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
PTPN20-227ENST00000513159 HECW2Q9P2P5 1572 aa15.99■□□□□ 0.15
PTPN20-227ENST00000513159 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
PTPN20-227ENST00000513159 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
PTPN20-227ENST00000513159 DNMT1P26358 1616 aaKnown RBP15.98■□□□□ 0.15
PTPN20-227ENST00000513159 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
PTPN20-227ENST00000513159 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
PTPN20-227ENST00000513159 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
PTPN20-227ENST00000513159 ABCC5O15440 1437 aa15.96■□□□□ 0.15
PTPN20-227ENST00000513159 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
PTPN20-227ENST00000513159 ARHGEF40Q8TER5 1519 aa15.96■□□□□ 0.15
PTPN20-227ENST00000513159 DIP2CQ9Y2E4 1556 aa15.96■□□□□ 0.14
PTPN20-227ENST00000513159 MAGI2Q86UL8 1455 aa15.95■□□□□ 0.14
PTPN20-227ENST00000513159 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
PTPN20-227ENST00000513159 ATP7AQ04656 1500 aa15.94■□□□□ 0.14
PTPN20-227ENST00000513159 MAST1Q9Y2H9 1570 aa15.94■□□□□ 0.14
PTPN20-227ENST00000513159 DAPK1P53355 1430 aa15.94■□□□□ 0.14
PTPN20-227ENST00000513159 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
PTPN20-227ENST00000513159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.92■□□□□ 0.14
PTPN20-227ENST00000513159 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
PTPN20-227ENST00000513159 SPAG9O60271 1321 aaKnown RBP15.92■□□□□ 0.14
PTPN20-227ENST00000513159 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
PTPN20-227ENST00000513159 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
PTPN20-227ENST00000513159 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
PTPN20-227ENST00000513159 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
PTPN20-227ENST00000513159 ATP10AO60312 1499 aa15.89■□□□□ 0.13
PTPN20-227ENST00000513159 REREQ9P2R6 1566 aa15.87■□□□□ 0.13
PTPN20-227ENST00000513159 PLXNC1O60486 1568 aa15.87■□□□□ 0.13
PTPN20-227ENST00000513159 ADGRL2O95490 1459 aa15.84■□□□□ 0.13
PTPN20-227ENST00000513159 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
PTPN20-227ENST00000513159 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
PTPN20-227ENST00000513159 CHIC2Q9UKJ5 165 aa15.84■□□□□ 0.13
PTPN20-227ENST00000513159 NCOA1Q15788 1441 aa15.84■□□□□ 0.13
PTPN20-227ENST00000513159 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
PTPN20-227ENST00000513159 A2MP01023 1474 aa15.83■□□□□ 0.12
PTPN20-227ENST00000513159 AGLP35573 1532 aa15.81■□□□□ 0.12
PTPN20-227ENST00000513159 ITGAEP38570 1179 aa15.81■□□□□ 0.12
PTPN20-227ENST00000513159 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
PTPN20-227ENST00000513159 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
PTPN20-227ENST00000513159 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
PTPN20-227ENST00000513159 KIF15Q9NS87 1388 aa15.78■□□□□ 0.12
PTPN20-227ENST00000513159 RRP7BPQ9NSQ0 103 aa15.78■□□□□ 0.12
PTPN20-227ENST00000513159 ROCK1Q13464 1354 aa15.77■□□□□ 0.12
PTPN20-227ENST00000513159 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
PTPN20-227ENST00000513159 DUOX2Q9NRD8 1548 aa15.77■□□□□ 0.11
PTPN20-227ENST00000513159 KDM4FA0A1W2PPD8 638 aa15.76■□□□□ 0.11
PTPN20-227ENST00000513159 MROH1Q8NDA8 1641 aa15.75■□□□□ 0.11
PTPN20-227ENST00000513159 EIF2AK4Q9P2K8 1649 aaKnown RBP15.75■□□□□ 0.11
PTPN20-227ENST00000513159 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
PTPN20-227ENST00000513159 MADDQ8WXG6 1647 aa15.73■□□□□ 0.11
PTPN20-227ENST00000513159 RNF17Q9BXT8 1623 aaKnown RBP15.73■□□□□ 0.11
PTPN20-227ENST00000513159 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
PTPN20-227ENST00000513159 NAIPQ13075 1403 aa15.72■□□□□ 0.11
PTPN20-227ENST00000513159 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
PTPN20-227ENST00000513159 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
PTPN20-227ENST00000513159 ERBINQ96RT1 1412 aa15.71■□□□□ 0.11
PTPN20-227ENST00000513159 MLECQ14165 292 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms