RNA–Protein interactions for RNA: ENST00000513144.1

SERF1B-206, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-206ENST00000513144 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
SERF1B-206ENST00000513144 MICALL2Q8IY33 904 aa12.64□□□□□ -0.39
SERF1B-206ENST00000513144 ST18O60284 1047 aa12.6□□□□□ -0.39
SERF1B-206ENST00000513144 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
SERF1B-206ENST00000513144 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
SERF1B-206ENST00000513144 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
SERF1B-206ENST00000513144 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
SERF1B-206ENST00000513144 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
SERF1B-206ENST00000513144 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
SERF1B-206ENST00000513144 SNPHO15079 494 aa12.43□□□□□ -0.42
SERF1B-206ENST00000513144 KIF3CO14782 793 aa12.42□□□□□ -0.42
SERF1B-206ENST00000513144 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
SERF1B-206ENST00000513144 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
SERF1B-206ENST00000513144 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
SERF1B-206ENST00000513144 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
SERF1B-206ENST00000513144 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
SERF1B-206ENST00000513144 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
SERF1B-206ENST00000513144 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
SERF1B-206ENST00000513144 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
SERF1B-206ENST00000513144 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
SERF1B-206ENST00000513144 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
SERF1B-206ENST00000513144 FOXK1P85037 733 aa12.29□□□□□ -0.44
SERF1B-206ENST00000513144 DSG2Q14126 1118 aa12.29□□□□□ -0.44
SERF1B-206ENST00000513144 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
SERF1B-206ENST00000513144 PDE4AP27815 886 aa12.27□□□□□ -0.45
SERF1B-206ENST00000513144 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
SERF1B-206ENST00000513144 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
SERF1B-206ENST00000513144 RIMBP2O15034 1052 aa12.24□□□□□ -0.45
SERF1B-206ENST00000513144 MFSD10Q14728 455 aa12.24□□□□□ -0.45
SERF1B-206ENST00000513144 PLPP6Q8IY26 295 aa12.24□□□□□ -0.45
SERF1B-206ENST00000513144 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
SERF1B-206ENST00000513144 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
SERF1B-206ENST00000513144 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
SERF1B-206ENST00000513144 GPR153Q6NV75 609 aa12.2□□□□□ -0.46
SERF1B-206ENST00000513144 SLC34A2O95436 690 aa12.19□□□□□ -0.46
SERF1B-206ENST00000513144 EMP3P54852 163 aa12.19□□□□□ -0.46
SERF1B-206ENST00000513144 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
SERF1B-206ENST00000513144 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
SERF1B-206ENST00000513144 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.46
SERF1B-206ENST00000513144 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
SERF1B-206ENST00000513144 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
SERF1B-206ENST00000513144 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
SERF1B-206ENST00000513144 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
SERF1B-206ENST00000513144 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
SERF1B-206ENST00000513144 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
SERF1B-206ENST00000513144 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
SERF1B-206ENST00000513144 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
SERF1B-206ENST00000513144 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
SERF1B-206ENST00000513144 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
SERF1B-206ENST00000513144 EMILIN3Q9NT22 766 aa12.1□□□□□ -0.47
SERF1B-206ENST00000513144 NUDT7P0C024 238 aa12.09□□□□□ -0.47
SERF1B-206ENST00000513144 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
SERF1B-206ENST00000513144 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
SERF1B-206ENST00000513144 ERBB3P21860 1342 aa12.08□□□□□ -0.48
SERF1B-206ENST00000513144 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
SERF1B-206ENST00000513144 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
SERF1B-206ENST00000513144 TBC1D12O60347 775 aa12.04□□□□□ -0.48
SERF1B-206ENST00000513144 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
SERF1B-206ENST00000513144 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
SERF1B-206ENST00000513144 VARS2Q5ST30 1063 aaKnown RBP12.03□□□□□ -0.48
SERF1B-206ENST00000513144 E2F4Q16254 413 aa12.02□□□□□ -0.49
SERF1B-206ENST00000513144 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
SERF1B-206ENST00000513144 DPYSL4O14531 572 aa11.96□□□□□ -0.49
SERF1B-206ENST00000513144 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
SERF1B-206ENST00000513144 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
SERF1B-206ENST00000513144 RNF166Q96A37 237 aaPredicted RBP11.96□□□□□ -0.49
SERF1B-206ENST00000513144 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
SERF1B-206ENST00000513144 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
SERF1B-206ENST00000513144 EVI5O60447 810 aa11.93□□□□□ -0.5
SERF1B-206ENST00000513144 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
SERF1B-206ENST00000513144 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
SERF1B-206ENST00000513144 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
SERF1B-206ENST00000513144 PDIA6Q15084 440 aa11.86□□□□□ -0.51
SERF1B-206ENST00000513144 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
SERF1B-206ENST00000513144 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
SERF1B-206ENST00000513144 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
SERF1B-206ENST00000513144 ZNF454Q8N9F8 522 aa11.84□□□□□ -0.51
SERF1B-206ENST00000513144 FOSBP53539 338 aa11.82□□□□□ -0.52
SERF1B-206ENST00000513144 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
SERF1B-206ENST00000513144 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
SERF1B-206ENST00000513144 PTGER2P43116 358 aa11.81□□□□□ -0.52
SERF1B-206ENST00000513144 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
SERF1B-206ENST00000513144 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
SERF1B-206ENST00000513144 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
SERF1B-206ENST00000513144 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
SERF1B-206ENST00000513144 PBX2P40425 430 aa11.78□□□□□ -0.52
SERF1B-206ENST00000513144 DDX12PQ92771 950 aa11.78□□□□□ -0.52
SERF1B-206ENST00000513144 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
SERF1B-206ENST00000513144 PHF14O94880 888 aa11.75□□□□□ -0.53
SERF1B-206ENST00000513144 PSEN2P49810 448 aa11.75□□□□□ -0.53
SERF1B-206ENST00000513144 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
SERF1B-206ENST00000513144 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
SERF1B-206ENST00000513144 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
SERF1B-206ENST00000513144 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
SERF1B-206ENST00000513144 ADAM33Q9BZ11 813 aa11.73□□□□□ -0.53
SERF1B-206ENST00000513144 SEMA3EO15041 775 aa11.72□□□□□ -0.53
SERF1B-206ENST00000513144 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
SERF1B-206ENST00000513144 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
SERF1B-206ENST00000513144 DMRTA1Q5VZB9 504 aa11.72□□□□□ -0.53
SERF1B-206ENST00000513144 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms