RNA–Protein interactions for RNA: ENST00000513108.1

PROM1-214, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-214ENST00000513108 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
PROM1-214ENST00000513108 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
PROM1-214ENST00000513108 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
PROM1-214ENST00000513108 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
PROM1-214ENST00000513108 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
PROM1-214ENST00000513108 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
PROM1-214ENST00000513108 ST18O60284 1047 aa10.23□□□□□ -0.77
PROM1-214ENST00000513108 KIF3CO14782 793 aa10.22□□□□□ -0.77
PROM1-214ENST00000513108 PDE4AP27815 886 aa10.22□□□□□ -0.77
PROM1-214ENST00000513108 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
PROM1-214ENST00000513108 HOXB3P14651 431 aaPredicted RBP10.19□□□□□ -0.78
PROM1-214ENST00000513108 POTEMA6NI47 508 aa10.16□□□□□ -0.78
PROM1-214ENST00000513108 FOXK1P85037 733 aa10.16□□□□□ -0.78
PROM1-214ENST00000513108 LCE2DQ5TA82 110 aaPredicted RBP10.16□□□□□ -0.78
PROM1-214ENST00000513108 POTEGQ6S5H5 508 aa10.16□□□□□ -0.78
PROM1-214ENST00000513108 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
PROM1-214ENST00000513108 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
PROM1-214ENST00000513108 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
PROM1-214ENST00000513108 CRISPLD2Q9H0B8 497 aa10.15□□□□□ -0.78
PROM1-214ENST00000513108 DSG2Q14126 1118 aa10.14□□□□□ -0.79
PROM1-214ENST00000513108 NCKAP5LQ9HCH0 1330 aa10.13□□□□□ -0.79
PROM1-214ENST00000513108 EMP3P54852 163 aa10.13□□□□□ -0.79
PROM1-214ENST00000513108 MARVELD3Q96A59 401 aa10.13□□□□□ -0.79
PROM1-214ENST00000513108 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
PROM1-214ENST00000513108 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
PROM1-214ENST00000513108 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
PROM1-214ENST00000513108 DDX27Q96GQ7 796 aaKnown RBP10.12□□□□□ -0.79
PROM1-214ENST00000513108 TBC1D12O60347 775 aa10.1□□□□□ -0.79
PROM1-214ENST00000513108 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
PROM1-214ENST00000513108 SLC34A2O95436 690 aa10.09□□□□□ -0.79
PROM1-214ENST00000513108 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
PROM1-214ENST00000513108 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
PROM1-214ENST00000513108 FAM205CA6NFA0 338 aa10.06□□□□□ -0.8
PROM1-214ENST00000513108 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
PROM1-214ENST00000513108 ERBB3P21860 1342 aa10.06□□□□□ -0.8
PROM1-214ENST00000513108 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
PROM1-214ENST00000513108 MFSD10Q14728 455 aa10.04□□□□□ -0.8
PROM1-214ENST00000513108 PTCD2Q8WV60 388 aaKnown RBP10.04□□□□□ -0.8
PROM1-214ENST00000513108 KHSRPQ92945 711 aaKnown RBP eCLIP10.04□□□□□ -0.8
PROM1-214ENST00000513108 NUDT7P0C024 238 aa10.03□□□□□ -0.8
PROM1-214ENST00000513108 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
PROM1-214ENST00000513108 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
PROM1-214ENST00000513108 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
PROM1-214ENST00000513108 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
PROM1-214ENST00000513108 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
PROM1-214ENST00000513108 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
PROM1-214ENST00000513108 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
PROM1-214ENST00000513108 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
PROM1-214ENST00000513108 ZNF316A6NFI3 1004 aaPredicted RBP9.98□□□□□ -0.81
PROM1-214ENST00000513108 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
PROM1-214ENST00000513108 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
PROM1-214ENST00000513108 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
PROM1-214ENST00000513108 E2F4Q16254 413 aa9.93□□□□□ -0.82
PROM1-214ENST00000513108 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
PROM1-214ENST00000513108 POTEB3A0JP26 581 aa9.92□□□□□ -0.82
PROM1-214ENST00000513108 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
PROM1-214ENST00000513108 POTEBQ6S5H4 581 aa9.92□□□□□ -0.82
PROM1-214ENST00000513108 EVI5O60447 810 aa9.91□□□□□ -0.82
PROM1-214ENST00000513108 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
PROM1-214ENST00000513108 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
PROM1-214ENST00000513108 DPYSL4O14531 572 aa9.88□□□□□ -0.83
PROM1-214ENST00000513108 PPP4R3BQ5MIZ7 849 aa9.87□□□□□ -0.83
PROM1-214ENST00000513108 ZNF454Q8N9F8 522 aa9.85□□□□□ -0.83
PROM1-214ENST00000513108 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
PROM1-214ENST00000513108 KCNH8Q96L42 1107 aa9.82□□□□□ -0.84
PROM1-214ENST00000513108 SPDYE16A6NNV3 312 aaPredicted RBP9.81□□□□□ -0.84
PROM1-214ENST00000513108 PBX2P40425 430 aa9.81□□□□□ -0.84
PROM1-214ENST00000513108 PLSCR2Q9NRY7 297 aa9.8□□□□□ -0.84
PROM1-214ENST00000513108 FOSBP53539 338 aa9.79□□□□□ -0.84
PROM1-214ENST00000513108 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
PROM1-214ENST00000513108 JPH4Q96JJ6 628 aa9.79□□□□□ -0.84
PROM1-214ENST00000513108 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
PROM1-214ENST00000513108 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
PROM1-214ENST00000513108 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
PROM1-214ENST00000513108 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
PROM1-214ENST00000513108 AXIN2Q9Y2T1 843 aa9.78□□□□□ -0.84
PROM1-214ENST00000513108 PDIA6Q15084 440 aa9.77□□□□□ -0.85
PROM1-214ENST00000513108 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
PROM1-214ENST00000513108 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
PROM1-214ENST00000513108 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
PROM1-214ENST00000513108 PHF14O94880 888 aa9.75□□□□□ -0.85
PROM1-214ENST00000513108 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
PROM1-214ENST00000513108 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
PROM1-214ENST00000513108 DDX12PQ92771 950 aa9.75□□□□□ -0.85
PROM1-214ENST00000513108 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
PROM1-214ENST00000513108 KCNK17Q96T54 332 aa9.75□□□□□ -0.85
PROM1-214ENST00000513108 PTPREP23469 700 aa9.74□□□□□ -0.85
PROM1-214ENST00000513108 LSM11P83369 360 aaKnown RBP eCLIP9.74□□□□□ -0.85
PROM1-214ENST00000513108 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
PROM1-214ENST00000513108 EPAS1Q99814 870 aa9.74□□□□□ -0.85
PROM1-214ENST00000513108 PCDHGA10Q9Y5H3 936 aa9.74□□□□□ -0.85
PROM1-214ENST00000513108 PTGER2P43116 358 aa9.73□□□□□ -0.85
PROM1-214ENST00000513108 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
PROM1-214ENST00000513108 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
PROM1-214ENST00000513108 PSEN2P49810 448 aa9.72□□□□□ -0.85
PROM1-214ENST00000513108 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
PROM1-214ENST00000513108 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
PROM1-214ENST00000513108 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
PROM1-214ENST00000513108 KDM2AQ9Y2K7 1162 aa9.71□□□□□ -0.86
PROM1-214ENST00000513108 NBR1Q14596 966 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms