RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 FGD6Q6ZV73 1430 aa16.54■□□□□ 0.24
PFDN1-204ENST00000512707 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
PFDN1-204ENST00000512707 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
PFDN1-204ENST00000512707 ABCA9Q8IUA7 1624 aa16.54■□□□□ 0.24
PFDN1-204ENST00000512707 GLI2P10070 1586 aa16.53■□□□□ 0.24
PFDN1-204ENST00000512707 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
PFDN1-204ENST00000512707 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
PFDN1-204ENST00000512707 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
PFDN1-204ENST00000512707 PREX2Q70Z35 1606 aa16.52■□□□□ 0.23
PFDN1-204ENST00000512707 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
PFDN1-204ENST00000512707 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
PFDN1-204ENST00000512707 PLCH2O75038 1416 aa16.5■□□□□ 0.23
PFDN1-204ENST00000512707 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
PFDN1-204ENST00000512707 FAM50AQ14320 339 aaKnown RBP16.49■□□□□ 0.23
PFDN1-204ENST00000512707 CD109Q6YHK3 1445 aa16.48■□□□□ 0.23
PFDN1-204ENST00000512707 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
PFDN1-204ENST00000512707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.48■□□□□ 0.231e-20■■■■■ 166.9
PFDN1-204ENST00000512707 PTPN23Q9H3S7 1636 aa16.48■□□□□ 0.23
PFDN1-204ENST00000512707 ZNF777Q9ULD5 760 aaPredicted RBP16.47■□□□□ 0.23
PFDN1-204ENST00000512707 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
PFDN1-204ENST00000512707 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
PFDN1-204ENST00000512707 CFAP74Q9C0B2 1584 aa16.45■□□□□ 0.22
PFDN1-204ENST00000512707 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
PFDN1-204ENST00000512707 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
PFDN1-204ENST00000512707 CDC42BPBQ9Y5S2 1711 aa16.44■□□□□ 0.22
PFDN1-204ENST00000512707 FANCAO15360 1455 aa16.43■□□□□ 0.22
PFDN1-204ENST00000512707 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
PFDN1-204ENST00000512707 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
PFDN1-204ENST00000512707 SAMD9LQ8IVG5 1584 aa16.39■□□□□ 0.21
PFDN1-204ENST00000512707 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
PFDN1-204ENST00000512707 NEO1Q92859 1461 aa16.39■□□□□ 0.21
PFDN1-204ENST00000512707 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
PFDN1-204ENST00000512707 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
PFDN1-204ENST00000512707 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
PFDN1-204ENST00000512707 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
PFDN1-204ENST00000512707 ITGAEP38570 1179 aa16.37■□□□□ 0.21
PFDN1-204ENST00000512707 ABCC1P33527 1531 aa16.36■□□□□ 0.21
PFDN1-204ENST00000512707 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
PFDN1-204ENST00000512707 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
PFDN1-204ENST00000512707 ARHGEF5Q12774 1597 aa16.35■□□□□ 0.21
PFDN1-204ENST00000512707 DNMT1P26358 1616 aaKnown RBP16.35■□□□□ 0.21
PFDN1-204ENST00000512707 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
PFDN1-204ENST00000512707 DAPK1P53355 1430 aa16.34■□□□□ 0.21
PFDN1-204ENST00000512707 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
PFDN1-204ENST00000512707 TSPY4P0CV99 314 aa16.33■□□□□ 0.2
PFDN1-204ENST00000512707 TSPY10P0CW01 314 aa16.33■□□□□ 0.2
PFDN1-204ENST00000512707 HNRNPMP52272 730 aaKnown RBP eCLIP16.33■□□□□ 0.2
PFDN1-204ENST00000512707 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
PFDN1-204ENST00000512707 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
PFDN1-204ENST00000512707 MBD5Q9P267 1494 aa16.3■□□□□ 0.2
PFDN1-204ENST00000512707 ABCC5O15440 1437 aa16.3■□□□□ 0.2
PFDN1-204ENST00000512707 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
PFDN1-204ENST00000512707 CROCC2H7BZ55 1655 aa16.29■□□□□ 0.2
PFDN1-204ENST00000512707 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
PFDN1-204ENST00000512707 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
PFDN1-204ENST00000512707 C9orf84Q5VXU9 1444 aa16.28■□□□□ 0.2
PFDN1-204ENST00000512707 ILDR1Q86SU0 546 aaPredicted RBP16.27■□□□□ 0.2
PFDN1-204ENST00000512707 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
PFDN1-204ENST00000512707 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
PFDN1-204ENST00000512707 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
PFDN1-204ENST00000512707 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
PFDN1-204ENST00000512707 SPAG9O60271 1321 aaKnown RBP16.25■□□□□ 0.19
PFDN1-204ENST00000512707 ADGBQ8N7X0 1667 aa16.25■□□□□ 0.19
PFDN1-204ENST00000512707 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
PFDN1-204ENST00000512707 TRAPPC8Q9Y2L5 1435 aa16.25■□□□□ 0.19
PFDN1-204ENST00000512707 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
PFDN1-204ENST00000512707 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
PFDN1-204ENST00000512707 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
PFDN1-204ENST00000512707 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
PFDN1-204ENST00000512707 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
PFDN1-204ENST00000512707 KCNA4P22459 653 aa16.22■□□□□ 0.19
PFDN1-204ENST00000512707 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
PFDN1-204ENST00000512707 HFM1A2PYH4 1435 aa16.21■□□□□ 0.19
PFDN1-204ENST00000512707 KDM5CP41229 1560 aa16.21■□□□□ 0.18
PFDN1-204ENST00000512707 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
PFDN1-204ENST00000512707 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
PFDN1-204ENST00000512707 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
PFDN1-204ENST00000512707 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
PFDN1-204ENST00000512707 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
PFDN1-204ENST00000512707 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
PFDN1-204ENST00000512707 ACIN1Q9UKV3 1341 aaKnown RBP16.19■□□□□ 0.18
PFDN1-204ENST00000512707 INO80Q9ULG1 1556 aaPredicted RBP16.18■□□□□ 0.18
PFDN1-204ENST00000512707 KIF15Q9NS87 1388 aa16.18■□□□□ 0.18
PFDN1-204ENST00000512707 RAPGEF3O95398 923 aa16.18■□□□□ 0.18
PFDN1-204ENST00000512707 RICTORQ6R327 1708 aa16.18■□□□□ 0.18
PFDN1-204ENST00000512707 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
PFDN1-204ENST00000512707 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
PFDN1-204ENST00000512707 ZMYM4Q5VZL5 1548 aa16.16■□□□□ 0.18
PFDN1-204ENST00000512707 NAIPQ13075 1403 aa16.16■□□□□ 0.18
PFDN1-204ENST00000512707 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
PFDN1-204ENST00000512707 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.18
PFDN1-204ENST00000512707 FRMPD1Q5SYB0 1578 aa16.14■□□□□ 0.17
PFDN1-204ENST00000512707 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
PFDN1-204ENST00000512707 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
PFDN1-204ENST00000512707 HRCP23327 699 aa16.12■□□□□ 0.17
PFDN1-204ENST00000512707 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
PFDN1-204ENST00000512707 KIDINS220Q9ULH0 1771 aa16.11■□□□□ 0.17
PFDN1-204ENST00000512707 A2MP01023 1474 aa16.08■□□□□ 0.16
PFDN1-204ENST00000512707 DHX29Q7Z478 1369 aaKnown RBP16.07■□□□□ 0.16
PFDN1-204ENST00000512707 DIP2CQ9Y2E4 1556 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms