RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 GPIHBP1Q8IV16 184 aa5□□□□□ -1.61
PVT1-202ENST00000512617 FAM177A1Q8N128 213 aaPredicted RBP5□□□□□ -1.61
PVT1-202ENST00000512617 DDRGK1Q96HY6 314 aa5□□□□□ -1.61
PVT1-202ENST00000512617 PROSER2Q86WR7 435 aaPredicted RBP4.99□□□□□ -1.61
PVT1-202ENST00000512617 DHX37Q8IY37 1157 aaKnown RBP4.99□□□□□ -1.61
PVT1-202ENST00000512617 ZNF692Q9BU19 519 aaPredicted RBP4.98□□□□□ -1.61
PVT1-202ENST00000512617 PLEKHG3A1L390 1219 aa4.97□□□□□ -1.61
PVT1-202ENST00000512617 PDE4CQ08493 712 aa4.97□□□□□ -1.61
PVT1-202ENST00000512617 AMOTL2Q9Y2J4 779 aa4.97□□□□□ -1.61
PVT1-202ENST00000512617 ZBTB12Q9Y330 459 aaPredicted RBP4.97□□□□□ -1.61
PVT1-202ENST00000512617 PPM1GO15355 546 aaPredicted RBP4.96□□□□□ -1.62
PVT1-202ENST00000512617 MCM6Q14566 821 aa4.95□□□□□ -1.62
PVT1-202ENST00000512617 RBM26Q5T8P6 1007 aaKnown RBP4.94□□□□□ -1.62
PVT1-202ENST00000512617 PABPN1Q86U42 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
PVT1-202ENST00000512617 FAM9AQ8IZU1 332 aaPredicted RBP4.94□□□□□ -1.62
PVT1-202ENST00000512617 UBE2Q2Q8WVN8 375 aa4.94□□□□□ -1.62
PVT1-202ENST00000512617 NUBP1P53384 320 aa4.93□□□□□ -1.62
PVT1-202ENST00000512617 KCNA1Q09470 495 aa4.93□□□□□ -1.62
PVT1-202ENST00000512617 PCMTD1Q96MG8 357 aaPredicted RBP4.93□□□□□ -1.62
PVT1-202ENST00000512617 GOPCQ9HD26 462 aa4.93□□□□□ -1.62
PVT1-202ENST00000512617 ACIN1Q9UKV3 1341 aaKnown RBP4.93□□□□□ -1.62
PVT1-202ENST00000512617 PPP1R15AO75807 674 aaPredicted RBP4.92□□□□□ -1.62
PVT1-202ENST00000512617 CCDC27Q2M243 656 aa4.92□□□□□ -1.62
PVT1-202ENST00000512617 CCDC125Q86Z20 511 aa4.92□□□□□ -1.62
PVT1-202ENST00000512617 FAM212AQ96EL1 285 aa4.92□□□□□ -1.62
PVT1-202ENST00000512617 CHRM1P11229 460 aaPredicted RBP4.91□□□□□ -1.62
PVT1-202ENST00000512617 CANXP27824 592 aaKnown RBP4.91□□□□□ -1.62
PVT1-202ENST00000512617 FNBP4Q8N3X1 1017 aaPredicted RBP4.91□□□□□ -1.62
PVT1-202ENST00000512617 PLSCR2Q9NRY7 297 aa4.91□□□□□ -1.62
PVT1-202ENST00000512617 SSUH2Q9Y2M2 353 aa4.9□□□□□ -1.63
PVT1-202ENST00000512617 CCDC180Q9P1Z9 1646 aa4.9□□□□□ -1.63
PVT1-202ENST00000512617 BRD1O95696 1058 aa4.89□□□□□ -1.63
PVT1-202ENST00000512617 POM121Q96HA1 1249 aa4.89□□□□□ -1.63
PVT1-202ENST00000512617 CWC22Q9HCG8 908 aaKnown RBP4.89□□□□□ -1.63
PVT1-202ENST00000512617 SPDYE2BA6NHP3 402 aa4.88□□□□□ -1.63
PVT1-202ENST00000512617 SPDYE6P0CI01 402 aa4.88□□□□□ -1.63
PVT1-202ENST00000512617 SPDYE2Q495Y8 402 aa4.88□□□□□ -1.63
PVT1-202ENST00000512617 ARIH1Q9Y4X5 557 aaPredicted RBP4.88□□□□□ -1.63
PVT1-202ENST00000512617 ARID4BQ4LE39 1312 aaPredicted RBP4.88□□□□□ -1.63
PVT1-202ENST00000512617 MLLT3P42568 568 aaPredicted RBP4.87□□□□□ -1.63
PVT1-202ENST00000512617 PARP9Q8IXQ6 854 aa4.87□□□□□ -1.63
PVT1-202ENST00000512617 UNCXA6NJT0 531 aa4.86□□□□□ -1.63
PVT1-202ENST00000512617 TAF7LQ5H9L4 462 aa4.86□□□□□ -1.63
PVT1-202ENST00000512617 ZNF330Q9Y3S2 320 aaPredicted RBP4.86□□□□□ -1.63
PVT1-202ENST00000512617 AMHR2Q16671 573 aa4.85□□□□□ -1.63
PVT1-202ENST00000512617 SND1Q7KZF4 910 aaKnown RBP eCLIP4.85□□□□□ -1.63
PVT1-202ENST00000512617 MINK1Q8N4C8 1332 aaPredicted RBP4.85□□□□□ -1.63
PVT1-202ENST00000512617 CCDC102AQ96A19 550 aa4.84□□□□□ -1.63
PVT1-202ENST00000512617 LARP6Q9BRS8 491 aaKnown RBP4.84□□□□□ -1.63
PVT1-202ENST00000512617 IGSF5Q9NSI5 407 aa4.84□□□□□ -1.63
PVT1-202ENST00000512617 USTQ9Y2C2 406 aa4.84□□□□□ -1.63
PVT1-202ENST00000512617 IVNS1ABPQ9Y6Y0 642 aa4.84□□□□□ -1.63
PVT1-202ENST00000512617 CSB-PGBD3P0DP91 1061 aa4.83□□□□□ -1.64
PVT1-202ENST00000512617 PYGBP11216 843 aa4.83□□□□□ -1.64
PVT1-202ENST00000512617 NCLP19338 710 aaKnown RBP4.83□□□□□ -1.64
PVT1-202ENST00000512617 TTLL12Q14166 644 aaPredicted RBP4.83□□□□□ -1.64
PVT1-202ENST00000512617 PSMD1Q99460 953 aa4.83□□□□□ -1.64
PVT1-202ENST00000512617 MFRPQ9BY79 579 aa4.83□□□□□ -1.64
PVT1-202ENST00000512617 COG6Q9Y2V7 657 aa4.83□□□□□ -1.64
PVT1-202ENST00000512617 ABCC9O60706 1549 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 SMARCA5O60264 1052 aaPredicted RBP4.82□□□□□ -1.64
PVT1-202ENST00000512617 PDE4AP27815 886 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 MAP2K5Q13163 448 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 SH3D19Q5HYK7 790 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 CERS3Q8IU89 383 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 ANKRD13AQ8IZ07 590 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 CALR3Q96L12 384 aaKnown RBP4.82□□□□□ -1.64
PVT1-202ENST00000512617 SPATA32Q96LK8 384 aa4.82□□□□□ -1.64
PVT1-202ENST00000512617 SPINK5Q9NQ38 1064 aaPredicted RBP4.82□□□□□ -1.64
PVT1-202ENST00000512617 ATP1B4Q9UN42 357 aaPredicted RBP4.82□□□□□ -1.64
PVT1-202ENST00000512617 NCKAP5LQ9HCH0 1330 aa4.81□□□□□ -1.64
PVT1-202ENST00000512617 RBM47A0AV96 593 aaKnown RBP4.81□□□□□ -1.64
PVT1-202ENST00000512617 PPP1R37O75864 691 aa4.81□□□□□ -1.64
PVT1-202ENST00000512617 DSG3P32926 999 aa4.81□□□□□ -1.64
PVT1-202ENST00000512617 OSCARQ8IYS5 282 aa4.81□□□□□ -1.64
PVT1-202ENST00000512617 ZNF592Q92610 1267 aa4.81□□□□□ -1.64
PVT1-202ENST00000512617 DRC1Q96MC2 740 aa4.81□□□□□ -1.64
PVT1-202ENST00000512617 BCCIPQ9P287 314 aaKnown RBP eCLIP4.81□□□□□ -1.64
PVT1-202ENST00000512617 SPDYE5A6NIY4 337 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 IRF6O14896 467 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 GPR37O15354 613 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 CAPN15O75808 1086 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 MFSD10Q14728 455 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 WWC1Q8IX03 1113 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 PBXIP1Q96AQ6 731 aa4.8□□□□□ -1.64
PVT1-202ENST00000512617 DDX27Q96GQ7 796 aaKnown RBP4.8□□□□□ -1.64
PVT1-202ENST00000512617 CC2D2BQ6DHV5 1058 aa4.79□□□□□ -1.64
PVT1-202ENST00000512617 MRRFQ96E11 262 aaKnown RBP4.79□□□□□ -1.64
PVT1-202ENST00000512617 CLSTN1O94985 981 aa4.78□□□□□ -1.64
PVT1-202ENST00000512617 CAMK2BQ13554 666 aa4.78□□□□□ -1.64
PVT1-202ENST00000512617 GIGYF2Q6Y7W6 1299 aaKnown RBP4.78□□□□□ -1.64
PVT1-202ENST00000512617 TICAM2Q86XR7 235 aa4.78□□□□□ -1.64
PVT1-202ENST00000512617 SREK1Q8WXA9 508 aaKnown RBP4.78□□□□□ -1.64
PVT1-202ENST00000512617 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.78□□□□□ -1.64
PVT1-202ENST00000512617 TBC1D12O60347 775 aa4.77□□□□□ -1.65
PVT1-202ENST00000512617 ABCB7O75027 752 aa4.77□□□□□ -1.65
PVT1-202ENST00000512617 KDM4AO75164 1064 aa4.77□□□□□ -1.65
PVT1-202ENST00000512617 MS4A1P11836 297 aa4.77□□□□□ -1.65
PVT1-202ENST00000512617 PDAP1Q13442 181 aaKnown RBP4.77□□□□□ -1.65
PVT1-202ENST00000512617 TSR1Q2NL82 804 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms