RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.44
CCHCR1-229ENST00000512418 MADDQ8WXG6 1647 aa24.07■■□□□ 1.44
CCHCR1-229ENST00000512418 SCAPERQ9BY12 1400 aa24.07■■□□□ 1.44
CCHCR1-229ENST00000512418 PCF11O94913 1555 aaKnown RBP24.04■■□□□ 1.44
CCHCR1-229ENST00000512418 YEATS2Q9ULM3 1422 aa24.04■■□□□ 1.44
CCHCR1-229ENST00000512418 EFCAB2Q5VUJ9 269 aa24.04■■□□□ 1.44
CCHCR1-229ENST00000512418 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
CCHCR1-229ENST00000512418 CCDC18Q5T9S5 1454 aa24.03■■□□□ 1.44
CCHCR1-229ENST00000512418 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
CCHCR1-229ENST00000512418 RIMS1Q86UR5 1692 aaKnown RBP23.98■■□□□ 1.43
CCHCR1-229ENST00000512418 SIGLEC1Q9BZZ2 1709 aa23.98■■□□□ 1.43
CCHCR1-229ENST00000512418 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
CCHCR1-229ENST00000512418 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
CCHCR1-229ENST00000512418 ATP10AO60312 1499 aa23.93■■□□□ 1.42
CCHCR1-229ENST00000512418 CDC42BPBQ9Y5S2 1711 aa23.93■■□□□ 1.42
CCHCR1-229ENST00000512418 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
CCHCR1-229ENST00000512418 KDM5CP41229 1560 aa23.92■■□□□ 1.42
CCHCR1-229ENST00000512418 C9orf84Q5VXU9 1444 aa23.92■■□□□ 1.42
CCHCR1-229ENST00000512418 ILDR1Q86SU0 546 aaPredicted RBP23.89■■□□□ 1.41
CCHCR1-229ENST00000512418 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
CCHCR1-229ENST00000512418 FER1L4A9Z1Z3 1794 aa23.88■■□□□ 1.41
CCHCR1-229ENST00000512418 AFAP1Q8N556 730 aa23.87■■□□□ 1.41
CCHCR1-229ENST00000512418 ABCC1P33527 1531 aa23.86■■□□□ 1.41
CCHCR1-229ENST00000512418 MLECQ14165 292 aa23.86■■□□□ 1.41
CCHCR1-229ENST00000512418 ARHGEF12Q9NZN5 1544 aa23.84■■□□□ 1.41
CCHCR1-229ENST00000512418 CDC42BPAQ5VT25 1732 aa23.84■■□□□ 1.41
CCHCR1-229ENST00000512418 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
CCHCR1-229ENST00000512418 MLH3Q9UHC1 1453 aa23.82■■□□□ 1.4
CCHCR1-229ENST00000512418 ITSN2Q9NZM3 1697 aa23.82■■□□□ 1.4
CCHCR1-229ENST00000512418 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
CCHCR1-229ENST00000512418 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
CCHCR1-229ENST00000512418 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
CCHCR1-229ENST00000512418 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
CCHCR1-229ENST00000512418 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
CCHCR1-229ENST00000512418 GPATCH8Q9UKJ3 1502 aaKnown RBP23.74■■□□□ 1.39
CCHCR1-229ENST00000512418 SAMD9LQ8IVG5 1584 aa23.74■■□□□ 1.39
CCHCR1-229ENST00000512418 AGLP35573 1532 aa23.72■■□□□ 1.39
CCHCR1-229ENST00000512418 KIDINS220Q9ULH0 1771 aa23.71■■□□□ 1.39
CCHCR1-229ENST00000512418 SYCP2Q9BX26 1530 aa23.7■■□□□ 1.38
CCHCR1-229ENST00000512418 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
CCHCR1-229ENST00000512418 HSPA2P54652 639 aa23.7■■□□□ 1.38
CCHCR1-229ENST00000512418 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
CCHCR1-229ENST00000512418 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
CCHCR1-229ENST00000512418 CCNB3Q8WWL7 1395 aa23.67■■□□□ 1.38
CCHCR1-229ENST00000512418 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
CCHCR1-229ENST00000512418 PLEKHH2Q8IVE3 1493 aa23.67■■□□□ 1.38
CCHCR1-229ENST00000512418 CFDP1Q9UEE9 299 aaPredicted RBP23.66■■□□□ 1.38
CCHCR1-229ENST00000512418 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
CCHCR1-229ENST00000512418 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
CCHCR1-229ENST00000512418 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
CCHCR1-229ENST00000512418 SPAG9O60271 1321 aaKnown RBP23.62■■□□□ 1.37
CCHCR1-229ENST00000512418 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCHCR1-229ENST00000512418 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
CCHCR1-229ENST00000512418 ATP7AQ04656 1500 aa23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 FBXO41Q8TF61 875 aa23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 INO80Q9ULG1 1556 aaPredicted RBP23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 C3P01024 1663 aa23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 UHRF1BP1Q6BDS2 1440 aa23.59■■□□□ 1.37
CCHCR1-229ENST00000512418 CNTLNQ9NXG0 1405 aa23.58■■□□□ 1.36
CCHCR1-229ENST00000512418 SETD1BQ9UPS6 1966 aaKnown RBP23.58■■□□□ 1.36
CCHCR1-229ENST00000512418 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
CCHCR1-229ENST00000512418 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
CCHCR1-229ENST00000512418 A2MP01023 1474 aa23.52■■□□□ 1.36
CCHCR1-229ENST00000512418 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
CCHCR1-229ENST00000512418 MBD5Q9P267 1494 aa23.5■■□□□ 1.35
CCHCR1-229ENST00000512418 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-229ENST00000512418 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
CCHCR1-229ENST00000512418 ADGBQ8N7X0 1667 aa23.48■■□□□ 1.35
CCHCR1-229ENST00000512418 STRCQ7RTU9 1775 aa23.47■■□□□ 1.35
CCHCR1-229ENST00000512418 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
CCHCR1-229ENST00000512418 RTEL1-TNFRSF6BF6WH68 1400 aa23.45■■□□□ 1.34
CCHCR1-229ENST00000512418 NPATQ14207 1427 aa23.45■■□□□ 1.34
CCHCR1-229ENST00000512418 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
CCHCR1-229ENST00000512418 ZMYM3Q14202 1370 aa23.43■■□□□ 1.34
CCHCR1-229ENST00000512418 CLTCQ00610 1675 aaKnown RBP23.42■■□□□ 1.34
CCHCR1-229ENST00000512418 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
CCHCR1-229ENST00000512418 CCDC141Q6ZP82 1450 aa23.42■■□□□ 1.34
CCHCR1-229ENST00000512418 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
CCHCR1-229ENST00000512418 CERKQ8TCT0 537 aa23.4■■□□□ 1.34
CCHCR1-229ENST00000512418 GGT6Q6P531 493 aa23.39■■□□□ 1.33
CCHCR1-229ENST00000512418 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
CCHCR1-229ENST00000512418 PPP6R1Q9UPN7 881 aa23.38■■□□□ 1.33
CCHCR1-229ENST00000512418 RSPH4AQ5TD94 716 aa23.37■■□□□ 1.33
CCHCR1-229ENST00000512418 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
CCHCR1-229ENST00000512418 PTPRTO14522 1441 aa23.36■■□□□ 1.33
CCHCR1-229ENST00000512418 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
CCHCR1-229ENST00000512418 MAP3K1Q13233 1512 aa23.34■■□□□ 1.33
CCHCR1-229ENST00000512418 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
CCHCR1-229ENST00000512418 PTPRKQ15262 1439 aa23.33■■□□□ 1.33
CCHCR1-229ENST00000512418 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.32
CCHCR1-229ENST00000512418 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
CCHCR1-229ENST00000512418 CAMSAP1Q5T5Y3 1602 aa23.31■■□□□ 1.32
CCHCR1-229ENST00000512418 FAM135AQ9P2D6 1515 aa23.28■■□□□ 1.32
CCHCR1-229ENST00000512418 CEP170BQ9Y4F5 1589 aaPredicted RBP23.28■■□□□ 1.32
CCHCR1-229ENST00000512418 KIF3BO15066 747 aa23.27■■□□□ 1.32
CCHCR1-229ENST00000512418 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
CCHCR1-229ENST00000512418 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
CCHCR1-229ENST00000512418 KDM5DQ9BY66 1539 aa23.26■■□□□ 1.31
CCHCR1-229ENST00000512418 KANK4Q5T7N3 995 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms