RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 POGZQ7Z3K3 1410 aa27.58■■■□□ 2
SNX2-211ENST00000512394 SCAPERQ9BY12 1400 aa27.58■■■□□ 2
SNX2-211ENST00000512394 MAGI2Q86UL8 1455 aa27.57■■■□□ 2
SNX2-211ENST00000512394 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
SNX2-211ENST00000512394 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
SNX2-211ENST00000512394 HECW2Q9P2P5 1572 aa27.54■■■□□ 2
SNX2-211ENST00000512394 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
SNX2-211ENST00000512394 CDC42BPBQ9Y5S2 1711 aa27.52■■■□□ 2
SNX2-211ENST00000512394 PREX2Q70Z35 1606 aa27.52■■■□□ 2
SNX2-211ENST00000512394 MADDQ8WXG6 1647 aa27.5■■□□□ 1.99
SNX2-211ENST00000512394 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
SNX2-211ENST00000512394 PTPRMP28827 1452 aa27.48■■□□□ 1.99
SNX2-211ENST00000512394 ZNF518AQ6AHZ1 1483 aa27.47■■□□□ 1.99
SNX2-211ENST00000512394 SIGLEC1Q9BZZ2 1709 aa27.45■■□□□ 1.99
SNX2-211ENST00000512394 CDC42BPAQ5VT25 1732 aa27.44■■□□□ 1.98
SNX2-211ENST00000512394 KDM5CP41229 1560 aa27.43■■□□□ 1.98
SNX2-211ENST00000512394 RIMS1Q86UR5 1692 aaKnown RBP27.42■■□□□ 1.98
SNX2-211ENST00000512394 ABCC1P33527 1531 aa27.41■■□□□ 1.98
SNX2-211ENST00000512394 CEP162Q5TB80 1403 aa27.4■■□□□ 1.98
SNX2-211ENST00000512394 ITSN2Q9NZM3 1697 aa27.39■■□□□ 1.97
SNX2-211ENST00000512394 ATP10AO60312 1499 aa27.38■■□□□ 1.97
SNX2-211ENST00000512394 C9orf84Q5VXU9 1444 aa27.38■■□□□ 1.97
SNX2-211ENST00000512394 FER1L4A9Z1Z3 1794 aa27.34■■□□□ 1.97
SNX2-211ENST00000512394 AFAP1Q8N556 730 aa27.33■■□□□ 1.97
SNX2-211ENST00000512394 DIP2CQ9Y2E4 1556 aa27.31■■□□□ 1.96
SNX2-211ENST00000512394 ARHGEF12Q9NZN5 1544 aa27.31■■□□□ 1.96
SNX2-211ENST00000512394 MTUS2Q5JR59 1369 aa27.3■■□□□ 1.96
SNX2-211ENST00000512394 MLH3Q9UHC1 1453 aa27.3■■□□□ 1.96
SNX2-211ENST00000512394 GPATCH8Q9UKJ3 1502 aaKnown RBP27.29■■□□□ 1.96
SNX2-211ENST00000512394 SAMD9LQ8IVG5 1584 aa27.29■■□□□ 1.96
SNX2-211ENST00000512394 ABCA6Q8N139 1617 aa27.29■■□□□ 1.96
SNX2-211ENST00000512394 REREQ9P2R6 1566 aa27.28■■□□□ 1.96
SNX2-211ENST00000512394 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
SNX2-211ENST00000512394 MYT1LQ9UL68 1186 aa27.28■■□□□ 1.96
SNX2-211ENST00000512394 EHBP1L1Q8N3D4 1523 aa27.27■■□□□ 1.96
SNX2-211ENST00000512394 MLECQ14165 292 aa27.26■■□□□ 1.95
SNX2-211ENST00000512394 SYCP2Q9BX26 1530 aa27.24■■□□□ 1.95
SNX2-211ENST00000512394 CCNB3Q8WWL7 1395 aa27.23■■□□□ 1.95
SNX2-211ENST00000512394 ZNF777Q9ULD5 760 aaPredicted RBP27.22■■□□□ 1.95
SNX2-211ENST00000512394 KIDINS220Q9ULH0 1771 aa27.22■■□□□ 1.95
SNX2-211ENST00000512394 PLEKHH2Q8IVE3 1493 aa27.2■■□□□ 1.95
SNX2-211ENST00000512394 LMTK3Q96Q04 1460 aa27.2■■□□□ 1.95
SNX2-211ENST00000512394 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
SNX2-211ENST00000512394 CFDP1Q9UEE9 299 aaPredicted RBP27.18■■□□□ 1.94
SNX2-211ENST00000512394 KIAA1107Q9UPP5 1409 aa27.16■■□□□ 1.94
SNX2-211ENST00000512394 AGLP35573 1532 aa27.16■■□□□ 1.94
SNX2-211ENST00000512394 LOC105371045A0A1W2PR82 267 aa27.16■■□□□ 1.94
SNX2-211ENST00000512394 PLPPR3Q6T4P5 718 aa27.15■■□□□ 1.94
SNX2-211ENST00000512394 SUPT6HQ7KZ85 1726 aaKnown RBP27.13■■□□□ 1.93
SNX2-211ENST00000512394 INO80Q9ULG1 1556 aaPredicted RBP27.11■■□□□ 1.93
SNX2-211ENST00000512394 VPS8Q8N3P4 1428 aa27.11■■□□□ 1.93
SNX2-211ENST00000512394 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
SNX2-211ENST00000512394 HNRNPMP52272 730 aaKnown RBP eCLIP27.1■■□□□ 1.93
SNX2-211ENST00000512394 SPAG9O60271 1321 aaKnown RBP27.1■■□□□ 1.93
SNX2-211ENST00000512394 PREX1Q8TCU6 1659 aa27.08■■□□□ 1.92
SNX2-211ENST00000512394 NCOA2Q15596 1464 aa27.05■■□□□ 1.92
SNX2-211ENST00000512394 C3P01024 1663 aa27.02■■□□□ 1.92
SNX2-211ENST00000512394 PLXNC1O60486 1568 aa27.01■■□□□ 1.92
SNX2-211ENST00000512394 ESF1Q9H501 851 aaKnown RBP27■■□□□ 1.91
SNX2-211ENST00000512394 ADGBQ8N7X0 1667 aa27■■□□□ 1.91
SNX2-211ENST00000512394 MBD5Q9P267 1494 aa27■■□□□ 1.91
SNX2-211ENST00000512394 ZNF644Q9H582 1327 aaPredicted RBP26.99■■□□□ 1.91
SNX2-211ENST00000512394 CEBPAP49715 358 aaPredicted RBP26.99■■□□□ 1.91
SNX2-211ENST00000512394 HSPA2P54652 639 aa26.98■■□□□ 1.91
SNX2-211ENST00000512394 A2MP01023 1474 aa26.98■■□□□ 1.91
SNX2-211ENST00000512394 LRRC9Q6ZRR7 1453 aa26.98■■□□□ 1.91
SNX2-211ENST00000512394 CNTLNQ9NXG0 1405 aa26.98■■□□□ 1.91
SNX2-211ENST00000512394 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
SNX2-211ENST00000512394 CAMSAP2Q08AD1 1489 aa26.96■■□□□ 1.91
SNX2-211ENST00000512394 MROH2AA6NES4 1674 aa26.95■■□□□ 1.91
SNX2-211ENST00000512394 ILDR1Q86SU0 546 aaPredicted RBP26.95■■□□□ 1.9
SNX2-211ENST00000512394 SETD1BQ9UPS6 1966 aaKnown RBP26.94■■□□□ 1.9
SNX2-211ENST00000512394 CCDC141Q6ZP82 1450 aa26.93■■□□□ 1.9
SNX2-211ENST00000512394 RTEL1-TNFRSF6BF6WH68 1400 aa26.92■■□□□ 1.9
SNX2-211ENST00000512394 UHRF1BP1Q6BDS2 1440 aa26.92■■□□□ 1.9
SNX2-211ENST00000512394 CLTCQ00610 1675 aaKnown RBP26.88■■□□□ 1.89
SNX2-211ENST00000512394 ARHGEF5Q12774 1597 aa26.87■■□□□ 1.89
SNX2-211ENST00000512394 RSPH4AQ5TD94 716 aa26.85■■□□□ 1.89
SNX2-211ENST00000512394 NPATQ14207 1427 aa26.82■■□□□ 1.88
SNX2-211ENST00000512394 KANK4Q5T7N3 995 aaPredicted RBP26.81■■□□□ 1.88
SNX2-211ENST00000512394 ZMYM3Q14202 1370 aa26.8■■□□□ 1.88
SNX2-211ENST00000512394 DHX29Q7Z478 1369 aaKnown RBP26.8■■□□□ 1.88
SNX2-211ENST00000512394 STRCQ7RTU9 1775 aa26.79■■□□□ 1.88
SNX2-211ENST00000512394 GGT6Q6P531 493 aa26.79■■□□□ 1.88
SNX2-211ENST00000512394 MYOM3Q5VTT5 1437 aa26.78■■□□□ 1.88
SNX2-211ENST00000512394 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
SNX2-211ENST00000512394 PPP6R1Q9UPN7 881 aa26.77■■□□□ 1.88
SNX2-211ENST00000512394 APLP2Q06481 763 aa26.75■■□□□ 1.87
SNX2-211ENST00000512394 MAST1Q9Y2H9 1570 aa26.75■■□□□ 1.87
SNX2-211ENST00000512394 TSPY4P0CV99 314 aa26.74■■□□□ 1.87
SNX2-211ENST00000512394 TSPY10P0CW01 314 aa26.74■■□□□ 1.87
SNX2-211ENST00000512394 MYO3AQ8NEV4 1616 aa26.72■■□□□ 1.87
SNX2-211ENST00000512394 FAM135AQ9P2D6 1515 aa26.72■■□□□ 1.87
SNX2-211ENST00000512394 FBXO41Q8TF61 875 aa26.71■■□□□ 1.87
SNX2-211ENST00000512394 DMRT2Q9Y5R5 561 aa26.71■■□□□ 1.87
SNX2-211ENST00000512394 ZNF142P52746 1687 aaPredicted RBP26.7■■□□□ 1.87
SNX2-211ENST00000512394 PTPRKQ15262 1439 aa26.69■■□□□ 1.86
SNX2-211ENST00000512394 KDM5DQ9BY66 1539 aa26.69■■□□□ 1.86
SNX2-211ENST00000512394 KIF3BO15066 747 aa26.68■■□□□ 1.86
SNX2-211ENST00000512394 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms