RNA–Protein interactions for RNA: ENST00000512338.1

CNBP-210, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 4

Gene CNBP, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-210ENST00000512338 RIMS1Q86UR5 1692 aaKnown RBP23.91■■□□□ 1.42
CNBP-210ENST00000512338 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
CNBP-210ENST00000512338 CDC42BPBQ9Y5S2 1711 aa23.9■■□□□ 1.42
CNBP-210ENST00000512338 ATP1B4Q9UN42 357 aaPredicted RBP23.89■■□□□ 1.41
CNBP-210ENST00000512338 SCAPERQ9BY12 1400 aa23.88■■□□□ 1.41
CNBP-210ENST00000512338 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
CNBP-210ENST00000512338 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
CNBP-210ENST00000512338 CCDC18Q5T9S5 1454 aa23.85■■□□□ 1.41
CNBP-210ENST00000512338 PREX2Q70Z35 1606 aa23.84■■□□□ 1.41
CNBP-210ENST00000512338 CLIP1P30622 1438 aa23.84■■□□□ 1.41
CNBP-210ENST00000512338 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
CNBP-210ENST00000512338 KDM5CP41229 1560 aa23.83■■□□□ 1.41
CNBP-210ENST00000512338 ARHGAP5Q13017 1502 aa23.83■■□□□ 1.41
CNBP-210ENST00000512338 FER1L4A9Z1Z3 1794 aa23.83■■□□□ 1.4
CNBP-210ENST00000512338 CDC42BPAQ5VT25 1732 aa23.81■■□□□ 1.4
CNBP-210ENST00000512338 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
CNBP-210ENST00000512338 EFCAB2Q5VUJ9 269 aa23.8■■□□□ 1.4
CNBP-210ENST00000512338 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
CNBP-210ENST00000512338 LMTK3Q96Q04 1460 aa23.78■■□□□ 1.4
CNBP-210ENST00000512338 ITSN2Q9NZM3 1697 aa23.76■■□□□ 1.39
CNBP-210ENST00000512338 ABCC1P33527 1531 aa23.76■■□□□ 1.39
CNBP-210ENST00000512338 ATP10AO60312 1499 aa23.75■■□□□ 1.39
CNBP-210ENST00000512338 C9orf84Q5VXU9 1444 aa23.75■■□□□ 1.39
CNBP-210ENST00000512338 ARHGEF12Q9NZN5 1544 aa23.74■■□□□ 1.39
CNBP-210ENST00000512338 DIP2CQ9Y2E4 1556 aa23.74■■□□□ 1.39
CNBP-210ENST00000512338 ILDR1Q86SU0 546 aaPredicted RBP23.73■■□□□ 1.39
CNBP-210ENST00000512338 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
CNBP-210ENST00000512338 REREQ9P2R6 1566 aa23.71■■□□□ 1.39
CNBP-210ENST00000512338 AFAP1Q8N556 730 aa23.67■■□□□ 1.38
CNBP-210ENST00000512338 MLH3Q9UHC1 1453 aa23.67■■□□□ 1.38
CNBP-210ENST00000512338 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
CNBP-210ENST00000512338 TRAPPC8Q9Y2L5 1435 aa23.66■■□□□ 1.38
CNBP-210ENST00000512338 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
CNBP-210ENST00000512338 MLECQ14165 292 aa23.64■■□□□ 1.37
CNBP-210ENST00000512338 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
CNBP-210ENST00000512338 GPATCH8Q9UKJ3 1502 aaKnown RBP23.6■■□□□ 1.37
CNBP-210ENST00000512338 AGLP35573 1532 aa23.59■■□□□ 1.37
CNBP-210ENST00000512338 SYCP2Q9BX26 1530 aa23.59■■□□□ 1.37
CNBP-210ENST00000512338 C3P01024 1663 aa23.55■■□□□ 1.36
CNBP-210ENST00000512338 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
CNBP-210ENST00000512338 SETD1BQ9UPS6 1966 aaKnown RBP23.53■■□□□ 1.36
CNBP-210ENST00000512338 HSPA2P54652 639 aa23.52■■□□□ 1.36
CNBP-210ENST00000512338 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
CNBP-210ENST00000512338 INO80Q9ULG1 1556 aaPredicted RBP23.52■■□□□ 1.36
CNBP-210ENST00000512338 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
CNBP-210ENST00000512338 EHBP1L1Q8N3D4 1523 aa23.5■■□□□ 1.35
CNBP-210ENST00000512338 KIAA1107Q9UPP5 1409 aa23.48■■□□□ 1.35
CNBP-210ENST00000512338 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
CNBP-210ENST00000512338 ATP7AQ04656 1500 aa23.47■■□□□ 1.35
CNBP-210ENST00000512338 PLXNC1O60486 1568 aa23.47■■□□□ 1.35
CNBP-210ENST00000512338 CEBPAP49715 358 aaPredicted RBP23.46■■□□□ 1.35
CNBP-210ENST00000512338 MTUS2Q5JR59 1369 aa23.46■■□□□ 1.35
CNBP-210ENST00000512338 SUPT6HQ7KZ85 1726 aaKnown RBP23.46■■□□□ 1.35
CNBP-210ENST00000512338 PLEKHH2Q8IVE3 1493 aa23.46■■□□□ 1.35
CNBP-210ENST00000512338 STRCQ7RTU9 1775 aa23.45■■□□□ 1.34
CNBP-210ENST00000512338 MROH2AA6NES4 1674 aa23.44■■□□□ 1.34
CNBP-210ENST00000512338 CCNB3Q8WWL7 1395 aa23.44■■□□□ 1.34
CNBP-210ENST00000512338 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
CNBP-210ENST00000512338 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.34
CNBP-210ENST00000512338 CFDP1Q9UEE9 299 aaPredicted RBP23.4■■□□□ 1.34
CNBP-210ENST00000512338 ADGBQ8N7X0 1667 aa23.4■■□□□ 1.34
CNBP-210ENST00000512338 FBXO41Q8TF61 875 aa23.39■■□□□ 1.33
CNBP-210ENST00000512338 UHRF1BP1Q6BDS2 1440 aa23.39■■□□□ 1.33
CNBP-210ENST00000512338 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
CNBP-210ENST00000512338 MBD5Q9P267 1494 aa23.37■■□□□ 1.33
CNBP-210ENST00000512338 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
CNBP-210ENST00000512338 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
CNBP-210ENST00000512338 A2MP01023 1474 aa23.35■■□□□ 1.33
CNBP-210ENST00000512338 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
CNBP-210ENST00000512338 NCOA2Q15596 1464 aa23.33■■□□□ 1.33
CNBP-210ENST00000512338 NPATQ14207 1427 aa23.28■■□□□ 1.32
CNBP-210ENST00000512338 CAMSAP2Q08AD1 1489 aa23.28■■□□□ 1.32
CNBP-210ENST00000512338 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
CNBP-210ENST00000512338 ESF1Q9H501 851 aaKnown RBP23.27■■□□□ 1.32
CNBP-210ENST00000512338 ZNF142P52746 1687 aaPredicted RBP23.27■■□□□ 1.32
CNBP-210ENST00000512338 RTEL1-TNFRSF6BF6WH68 1400 aa23.26■■□□□ 1.31
CNBP-210ENST00000512338 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
CNBP-210ENST00000512338 CCDC141Q6ZP82 1450 aa23.25■■□□□ 1.31
CNBP-210ENST00000512338 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
CNBP-210ENST00000512338 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
CNBP-210ENST00000512338 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
CNBP-210ENST00000512338 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
CNBP-210ENST00000512338 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
CNBP-210ENST00000512338 PTPRTO14522 1441 aa23.2■■□□□ 1.3
CNBP-210ENST00000512338 CERKQ8TCT0 537 aa23.2■■□□□ 1.3
CNBP-210ENST00000512338 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
CNBP-210ENST00000512338 PTPRKQ15262 1439 aa23.19■■□□□ 1.3
CNBP-210ENST00000512338 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
CNBP-210ENST00000512338 DHX29Q7Z478 1369 aaKnown RBP23.17■■□□□ 1.3
CNBP-210ENST00000512338 CEP170BQ9Y4F5 1589 aaPredicted RBP23.17■■□□□ 1.3
CNBP-210ENST00000512338 DMRT2Q9Y5R5 561 aa23.16■■□□□ 1.3
CNBP-210ENST00000512338 GGT6Q6P531 493 aa23.15■■□□□ 1.3
CNBP-210ENST00000512338 FAM135AQ9P2D6 1515 aa23.14■■□□□ 1.3
CNBP-210ENST00000512338 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
CNBP-210ENST00000512338 LTBP4Q8N2S1 1624 aa23.13■■□□□ 1.29
CNBP-210ENST00000512338 PPP6R1Q9UPN7 881 aa23.12■■□□□ 1.29
CNBP-210ENST00000512338 KDM5DQ9BY66 1539 aa23.11■■□□□ 1.29
CNBP-210ENST00000512338 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
CNBP-210ENST00000512338 RSPH4AQ5TD94 716 aa23.09■■□□□ 1.29
CNBP-210ENST00000512338 RNF17Q9BXT8 1623 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms