RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
DDX41-214ENST00000512334 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
DDX41-214ENST00000512334 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
DDX41-214ENST00000512334 CDC42BPAQ5VT25 1732 aa25.16■■□□□ 1.62
DDX41-214ENST00000512334 RICTORQ6R327 1708 aa25.16■■□□□ 1.62
DDX41-214ENST00000512334 TIAM1Q13009 1591 aa25.15■■□□□ 1.62
DDX41-214ENST00000512334 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
DDX41-214ENST00000512334 POGZQ7Z3K3 1410 aa25.11■■□□□ 1.61
DDX41-214ENST00000512334 ZNF777Q9ULD5 760 aaPredicted RBP25.1■■□□□ 1.61
DDX41-214ENST00000512334 GPATCH8Q9UKJ3 1502 aaKnown RBP25.1■■□□□ 1.61
DDX41-214ENST00000512334 KDM4FA0A1W2PPD8 638 aa25.08■■□□□ 1.61
DDX41-214ENST00000512334 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
DDX41-214ENST00000512334 APLP2Q06481 763 aa25.06■■□□□ 1.6
DDX41-214ENST00000512334 CFDP1Q9UEE9 299 aaPredicted RBP25.06■■□□□ 1.6
DDX41-214ENST00000512334 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
DDX41-214ENST00000512334 ABCC1P33527 1531 aa25.05■■□□□ 1.6
DDX41-214ENST00000512334 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
DDX41-214ENST00000512334 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
DDX41-214ENST00000512334 MAP3K1Q13233 1512 aa25.04■■□□□ 1.6
DDX41-214ENST00000512334 ARHGEF40Q8TER5 1519 aa25.04■■□□□ 1.6
DDX41-214ENST00000512334 ZFYVE16Q7Z3T8 1539 aa25.03■■□□□ 1.6
DDX41-214ENST00000512334 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
DDX41-214ENST00000512334 AFAP1Q8N556 730 aa25.02■■□□□ 1.6
DDX41-214ENST00000512334 SAMD9LQ8IVG5 1584 aa25.01■■□□□ 1.59
DDX41-214ENST00000512334 ITSN2Q9NZM3 1697 aa25.01■■□□□ 1.59
DDX41-214ENST00000512334 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
DDX41-214ENST00000512334 MAGI2Q86UL8 1455 aa25.01■■□□□ 1.59
DDX41-214ENST00000512334 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
DDX41-214ENST00000512334 YEATS2Q9ULM3 1422 aa25■■□□□ 1.59
DDX41-214ENST00000512334 ARID4BQ4LE39 1312 aaPredicted RBP24.99■■□□□ 1.59
DDX41-214ENST00000512334 ARHGEF12Q9NZN5 1544 aa24.99■■□□□ 1.59
DDX41-214ENST00000512334 TRAPPC8Q9Y2L5 1435 aa24.98■■□□□ 1.59
DDX41-214ENST00000512334 KDM5CP41229 1560 aa24.97■■□□□ 1.59
DDX41-214ENST00000512334 SYCP2Q9BX26 1530 aa24.96■■□□□ 1.59
DDX41-214ENST00000512334 PLEKHH2Q8IVE3 1493 aa24.95■■□□□ 1.58
DDX41-214ENST00000512334 HNRNPMP52272 730 aaKnown RBP eCLIP24.94■■□□□ 1.58
DDX41-214ENST00000512334 HECW2Q9P2P5 1572 aa24.93■■□□□ 1.58
DDX41-214ENST00000512334 ZNF644Q9H582 1327 aaPredicted RBP24.91■■□□□ 1.58
DDX41-214ENST00000512334 KIAA1107Q9UPP5 1409 aa24.91■■□□□ 1.58
DDX41-214ENST00000512334 ATP10AO60312 1499 aa24.89■■□□□ 1.58
DDX41-214ENST00000512334 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.57
DDX41-214ENST00000512334 C9orf84Q5VXU9 1444 aa24.87■■□□□ 1.57
DDX41-214ENST00000512334 BCORL1Q5H9F3 1711 aa24.86■■□□□ 1.57
DDX41-214ENST00000512334 SPAG9O60271 1321 aaKnown RBP24.85■■□□□ 1.57
DDX41-214ENST00000512334 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
DDX41-214ENST00000512334 CAMSAP2Q08AD1 1489 aa24.84■■□□□ 1.57
DDX41-214ENST00000512334 SIGLEC1Q9BZZ2 1709 aa24.84■■□□□ 1.57
DDX41-214ENST00000512334 ABCA6Q8N139 1617 aa24.84■■□□□ 1.57
DDX41-214ENST00000512334 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
DDX41-214ENST00000512334 ADAMTSL3P82987 1691 aa24.81■■□□□ 1.56
DDX41-214ENST00000512334 MYOM3Q5VTT5 1437 aa24.81■■□□□ 1.56
DDX41-214ENST00000512334 MLECQ14165 292 aa24.81■■□□□ 1.56
DDX41-214ENST00000512334 MBD5Q9P267 1494 aa24.8■■□□□ 1.56
DDX41-214ENST00000512334 ATP7AQ04656 1500 aa24.78■■□□□ 1.56
DDX41-214ENST00000512334 MADDQ8WXG6 1647 aa24.78■■□□□ 1.56
DDX41-214ENST00000512334 INO80Q9ULG1 1556 aaPredicted RBP24.76■■□□□ 1.55
DDX41-214ENST00000512334 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
DDX41-214ENST00000512334 CCDC141Q6ZP82 1450 aa24.76■■□□□ 1.55
DDX41-214ENST00000512334 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
DDX41-214ENST00000512334 RSPH4AQ5TD94 716 aa24.73■■□□□ 1.55
DDX41-214ENST00000512334 RIMS1Q86UR5 1692 aaKnown RBP24.72■■□□□ 1.55
DDX41-214ENST00000512334 PTPRMP28827 1452 aa24.71■■□□□ 1.55
DDX41-214ENST00000512334 ARHGEF5Q12774 1597 aa24.71■■□□□ 1.55
DDX41-214ENST00000512334 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
DDX41-214ENST00000512334 RTEL1-TNFRSF6BF6WH68 1400 aa24.69■■□□□ 1.54
DDX41-214ENST00000512334 AGLP35573 1532 aa24.68■■□□□ 1.54
DDX41-214ENST00000512334 TSPY4P0CV99 314 aa24.68■■□□□ 1.54
DDX41-214ENST00000512334 TSPY10P0CW01 314 aa24.68■■□□□ 1.54
DDX41-214ENST00000512334 PTPN23Q9H3S7 1636 aa24.67■■□□□ 1.54
DDX41-214ENST00000512334 A2MP01023 1474 aa24.66■■□□□ 1.54
DDX41-214ENST00000512334 PLPPR3Q6T4P5 718 aa24.66■■□□□ 1.54
DDX41-214ENST00000512334 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
DDX41-214ENST00000512334 ADGBQ8N7X0 1667 aa24.65■■□□□ 1.54
DDX41-214ENST00000512334 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
DDX41-214ENST00000512334 PLXNC1O60486 1568 aa24.61■■□□□ 1.53
DDX41-214ENST00000512334 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
DDX41-214ENST00000512334 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
DDX41-214ENST00000512334 MAST1Q9Y2H9 1570 aa24.57■■□□□ 1.52
DDX41-214ENST00000512334 DHX29Q7Z478 1369 aaKnown RBP24.56■■□□□ 1.52
DDX41-214ENST00000512334 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
DDX41-214ENST00000512334 GGT6Q6P531 493 aa24.54■■□□□ 1.52
DDX41-214ENST00000512334 ABCC5O15440 1437 aa24.53■■□□□ 1.52
DDX41-214ENST00000512334 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
DDX41-214ENST00000512334 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
DDX41-214ENST00000512334 DAPK1P53355 1430 aa24.52■■□□□ 1.52
DDX41-214ENST00000512334 CEBPAP49715 358 aaPredicted RBP24.51■■□□□ 1.51
DDX41-214ENST00000512334 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
DDX41-214ENST00000512334 KIF3BO15066 747 aa24.5■■□□□ 1.51
DDX41-214ENST00000512334 CNTLNQ9NXG0 1405 aa24.49■■□□□ 1.51
DDX41-214ENST00000512334 CHIC2Q9UKJ5 165 aa24.46■■□□□ 1.51
DDX41-214ENST00000512334 C3P01024 1663 aa24.45■■□□□ 1.5
DDX41-214ENST00000512334 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
DDX41-214ENST00000512334 RRP7BPQ9NSQ0 103 aa24.44■■□□□ 1.5
DDX41-214ENST00000512334 KIF15Q9NS87 1388 aa24.43■■□□□ 1.5
DDX41-214ENST00000512334 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
DDX41-214ENST00000512334 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
DDX41-214ENST00000512334 MROH2AA6NES4 1674 aa24.41■■□□□ 1.5
DDX41-214ENST00000512334 ANKRD30AQ9BXX3 1397 aa24.41■■□□□ 1.5
DDX41-214ENST00000512334 ZMYM3Q14202 1370 aa24.4■■□□□ 1.5
DDX41-214ENST00000512334 EIF2AK4Q9P2K8 1649 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms