RNA–Protein interactions for RNA: ENST00000512309.1

COPB2-210, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-210ENST00000512309 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
COPB2-210ENST00000512309 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
COPB2-210ENST00000512309 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
COPB2-210ENST00000512309 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
COPB2-210ENST00000512309 MS4A4AQ96JQ5 239 aa12.51□□□□□ -0.41
COPB2-210ENST00000512309 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
COPB2-210ENST00000512309 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
COPB2-210ENST00000512309 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
COPB2-210ENST00000512309 SOX12O15370 315 aa12.43□□□□□ -0.42
COPB2-210ENST00000512309 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
COPB2-210ENST00000512309 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
COPB2-210ENST00000512309 PBX2P40425 430 aa12.41□□□□□ -0.42
COPB2-210ENST00000512309 NUDT7P0C024 238 aa12.4□□□□□ -0.42
COPB2-210ENST00000512309 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
COPB2-210ENST00000512309 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
COPB2-210ENST00000512309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
COPB2-210ENST00000512309 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
COPB2-210ENST00000512309 ADGRD1Q6QNK2 874 aa12.31□□□□□ -0.44
COPB2-210ENST00000512309 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
COPB2-210ENST00000512309 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
COPB2-210ENST00000512309 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
COPB2-210ENST00000512309 KIF3CO14782 793 aa12.26□□□□□ -0.45
COPB2-210ENST00000512309 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
COPB2-210ENST00000512309 NLRP6P59044 892 aa12.24□□□□□ -0.45
COPB2-210ENST00000512309 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
COPB2-210ENST00000512309 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
COPB2-210ENST00000512309 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
COPB2-210ENST00000512309 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
COPB2-210ENST00000512309 SLC34A2O95436 690 aa12.18□□□□□ -0.46
COPB2-210ENST00000512309 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
COPB2-210ENST00000512309 HRO43593 1189 aa12.17□□□□□ -0.46
COPB2-210ENST00000512309 TK2O00142 265 aa12.15□□□□□ -0.46
COPB2-210ENST00000512309 PSEN2P49810 448 aa12.15□□□□□ -0.46
COPB2-210ENST00000512309 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
COPB2-210ENST00000512309 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
COPB2-210ENST00000512309 PSDA5PKW4 1024 aaPredicted RBP12.11□□□□□ -0.47
COPB2-210ENST00000512309 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
COPB2-210ENST00000512309 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
COPB2-210ENST00000512309 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
COPB2-210ENST00000512309 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
COPB2-210ENST00000512309 PTPN5P54829 565 aa12.06□□□□□ -0.48
COPB2-210ENST00000512309 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
COPB2-210ENST00000512309 RGS20O76081 388 aa12.04□□□□□ -0.48
COPB2-210ENST00000512309 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
COPB2-210ENST00000512309 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
COPB2-210ENST00000512309 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
COPB2-210ENST00000512309 A0A0G2JS52 829 aa11.97□□□□□ -0.49
COPB2-210ENST00000512309 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
COPB2-210ENST00000512309 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
COPB2-210ENST00000512309 STK25O00506 426 aa11.94□□□□□ -0.5
COPB2-210ENST00000512309 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
COPB2-210ENST00000512309 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
COPB2-210ENST00000512309 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
COPB2-210ENST00000512309 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
COPB2-210ENST00000512309 PPP1R37O75864 691 aa11.88□□□□□ -0.51
COPB2-210ENST00000512309 PKD2Q13563 968 aa11.86□□□□□ -0.51
COPB2-210ENST00000512309 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
COPB2-210ENST00000512309 Q6ZNB5 142 aa11.84□□□□□ -0.51
COPB2-210ENST00000512309 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
COPB2-210ENST00000512309 FOXK1P85037 733 aa11.82□□□□□ -0.52
COPB2-210ENST00000512309 WNT2BQ93097 391 aa11.82□□□□□ -0.52
COPB2-210ENST00000512309 GOLGA8CPA6NN73 597 aa11.81□□□□□ -0.52
COPB2-210ENST00000512309 TBC1D12O60347 775 aa11.81□□□□□ -0.52
COPB2-210ENST00000512309 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
COPB2-210ENST00000512309 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
COPB2-210ENST00000512309 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
COPB2-210ENST00000512309 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
COPB2-210ENST00000512309 DSG2Q14126 1118 aa11.77□□□□□ -0.53
COPB2-210ENST00000512309 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
COPB2-210ENST00000512309 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
COPB2-210ENST00000512309 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
COPB2-210ENST00000512309 ZBED2Q9BTP6 218 aa11.73□□□□□ -0.53
COPB2-210ENST00000512309 PTPREP23469 700 aa11.7□□□□□ -0.54
COPB2-210ENST00000512309 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
COPB2-210ENST00000512309 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
COPB2-210ENST00000512309 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
COPB2-210ENST00000512309 FOSBP53539 338 aa11.66□□□□□ -0.54
COPB2-210ENST00000512309 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
COPB2-210ENST00000512309 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
COPB2-210ENST00000512309 LCE2BO14633 110 aa11.64□□□□□ -0.55
COPB2-210ENST00000512309 RGL2O15211 777 aa11.64□□□□□ -0.55
COPB2-210ENST00000512309 BCAMP50895 628 aa11.59□□□□□ -0.55
COPB2-210ENST00000512309 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
COPB2-210ENST00000512309 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
COPB2-210ENST00000512309 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
COPB2-210ENST00000512309 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
COPB2-210ENST00000512309 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
COPB2-210ENST00000512309 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
COPB2-210ENST00000512309 LAPTM4AQ15012 233 aa11.55□□□□□ -0.56
COPB2-210ENST00000512309 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
COPB2-210ENST00000512309 GFRA3O60609 400 aa11.53□□□□□ -0.56
COPB2-210ENST00000512309 PROX2Q3B8N5 592 aa11.53□□□□□ -0.56
COPB2-210ENST00000512309 KCNC4Q03721 635 aa11.52□□□□□ -0.57
COPB2-210ENST00000512309 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
COPB2-210ENST00000512309 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
COPB2-210ENST00000512309 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
COPB2-210ENST00000512309 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
COPB2-210ENST00000512309 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
COPB2-210ENST00000512309 WBP1LQ9NX94 342 aa11.49□□□□□ -0.57
COPB2-210ENST00000512309 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms