RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 CDC42BPBQ9Y5S2 1711 aa15.18■□□□□ 0.02
PDGFRA-209ENST00000512143 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
PDGFRA-209ENST00000512143 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
PDGFRA-209ENST00000512143 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
PDGFRA-209ENST00000512143 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
PDGFRA-209ENST00000512143 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
PDGFRA-209ENST00000512143 GLI2P10070 1586 aa15.15■□□□□ 0.02
PDGFRA-209ENST00000512143 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
PDGFRA-209ENST00000512143 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
PDGFRA-209ENST00000512143 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
PDGFRA-209ENST00000512143 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
PDGFRA-209ENST00000512143 MBD5Q9P267 1494 aa15.1■□□□□ 0.01
PDGFRA-209ENST00000512143 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
PDGFRA-209ENST00000512143 DIP2BQ9P265 1576 aa15.1■□□□□ 0.01
PDGFRA-209ENST00000512143 ABCC5O15440 1437 aa15.09■□□□□ 0.01
PDGFRA-209ENST00000512143 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
PDGFRA-209ENST00000512143 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
PDGFRA-209ENST00000512143 DNMT1P26358 1616 aaKnown RBP15.09■□□□□ 0.01
PDGFRA-209ENST00000512143 MAP3K4Q9Y6R4 1608 aa15.08■□□□□ 0
PDGFRA-209ENST00000512143 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
PDGFRA-209ENST00000512143 DAPK1P53355 1430 aa15.08■□□□□ 0
PDGFRA-209ENST00000512143 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
PDGFRA-209ENST00000512143 ITGAEP38570 1179 aa15.07■□□□□ 0
PDGFRA-209ENST00000512143 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
PDGFRA-209ENST00000512143 FANCAO15360 1455 aa15.06■□□□□ 0
PDGFRA-209ENST00000512143 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
PDGFRA-209ENST00000512143 FAM69CQ0P6D2 419 aa15.05■□□□□ -0
PDGFRA-209ENST00000512143 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
PDGFRA-209ENST00000512143 ABCC1P33527 1531 aa15.05■□□□□ -0
PDGFRA-209ENST00000512143 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
PDGFRA-209ENST00000512143 AKNAQ7Z591 1439 aa15.03■□□□□ -0
PDGFRA-209ENST00000512143 SYCP2Q9BX26 1530 aa15.02■□□□□ -0
PDGFRA-209ENST00000512143 SHANK2Q9UPX8 1470 aa15.02■□□□□ -0
PDGFRA-209ENST00000512143 ROCK1Q13464 1354 aa15.02■□□□□ -0
PDGFRA-209ENST00000512143 KIF13AQ9H1H9 1805 aa15.02■□□□□ -0
PDGFRA-209ENST00000512143 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
PDGFRA-209ENST00000512143 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
PDGFRA-209ENST00000512143 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
PDGFRA-209ENST00000512143 NEO1Q92859 1461 aa15.01□□□□□ -0.01
PDGFRA-209ENST00000512143 HFM1A2PYH4 1435 aa15□□□□□ -0.01
PDGFRA-209ENST00000512143 CFAP74Q9C0B2 1584 aa15□□□□□ -0.01
PDGFRA-209ENST00000512143 HRCP23327 699 aa14.99□□□□□ -0.01
PDGFRA-209ENST00000512143 PPRC1Q5VV67 1664 aaKnown RBP14.99□□□□□ -0.01
PDGFRA-209ENST00000512143 NAIPQ13075 1403 aa14.99□□□□□ -0.01
PDGFRA-209ENST00000512143 SETD5Q9C0A6 1442 aa14.99□□□□□ -0.01
PDGFRA-209ENST00000512143 TRAPPC8Q9Y2L5 1435 aa14.99□□□□□ -0.01
PDGFRA-209ENST00000512143 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
PDGFRA-209ENST00000512143 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
PDGFRA-209ENST00000512143 NCOA1Q15788 1441 aa14.98□□□□□ -0.01
PDGFRA-209ENST00000512143 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
PDGFRA-209ENST00000512143 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
PDGFRA-209ENST00000512143 CHIC2Q9UKJ5 165 aa14.97□□□□□ -0.01
PDGFRA-209ENST00000512143 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
PDGFRA-209ENST00000512143 SCAPERQ9BY12 1400 aa14.97□□□□□ -0.01
PDGFRA-209ENST00000512143 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
PDGFRA-209ENST00000512143 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
PDGFRA-209ENST00000512143 AFAP1Q8N556 730 aa14.94□□□□□ -0.02
PDGFRA-209ENST00000512143 RRP7BPQ9NSQ0 103 aa14.94□□□□□ -0.02
PDGFRA-209ENST00000512143 ANKRD30AQ9BXX3 1397 aa14.94□□□□□ -0.02
PDGFRA-209ENST00000512143 GCC2Q8IWJ2 1684 aa14.93□□□□□ -0.02
PDGFRA-209ENST00000512143 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
PDGFRA-209ENST00000512143 TEX14Q8IWB6 1497 aa14.93□□□□□ -0.02
PDGFRA-209ENST00000512143 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
PDGFRA-209ENST00000512143 TSPOAP1O95153 1857 aa14.91□□□□□ -0.02
PDGFRA-209ENST00000512143 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
PDGFRA-209ENST00000512143 KDM5CP41229 1560 aa14.9□□□□□ -0.02
PDGFRA-209ENST00000512143 ZNF518AQ6AHZ1 1483 aa14.9□□□□□ -0.02
PDGFRA-209ENST00000512143 INO80Q9ULG1 1556 aaPredicted RBP14.9□□□□□ -0.02
PDGFRA-209ENST00000512143 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
PDGFRA-209ENST00000512143 KDM6BO15054 1643 aa14.89□□□□□ -0.03
PDGFRA-209ENST00000512143 ZFYVE16Q7Z3T8 1539 aa14.89□□□□□ -0.03
PDGFRA-209ENST00000512143 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
PDGFRA-209ENST00000512143 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
PDGFRA-209ENST00000512143 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
PDGFRA-209ENST00000512143 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
PDGFRA-209ENST00000512143 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
PDGFRA-209ENST00000512143 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
PDGFRA-209ENST00000512143 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
PDGFRA-209ENST00000512143 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
PDGFRA-209ENST00000512143 ACIN1Q9UKV3 1341 aaKnown RBP14.85□□□□□ -0.03
PDGFRA-209ENST00000512143 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
PDGFRA-209ENST00000512143 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
PDGFRA-209ENST00000512143 COL17A1Q9UMD9 1497 aaPredicted RBP14.84□□□□□ -0.03
PDGFRA-209ENST00000512143 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
PDGFRA-209ENST00000512143 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
PDGFRA-209ENST00000512143 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
PDGFRA-209ENST00000512143 ERBINQ96RT1 1412 aa14.81□□□□□ -0.04
PDGFRA-209ENST00000512143 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
PDGFRA-209ENST00000512143 DHX29Q7Z478 1369 aaKnown RBP14.79□□□□□ -0.04
PDGFRA-209ENST00000512143 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
PDGFRA-209ENST00000512143 MAGI2Q86UL8 1455 aa14.78□□□□□ -0.04
PDGFRA-209ENST00000512143 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
PDGFRA-209ENST00000512143 CLSPNQ9HAW4 1339 aa14.77□□□□□ -0.04
PDGFRA-209ENST00000512143 KDM5DQ9BY66 1539 aa14.76□□□□□ -0.05
PDGFRA-209ENST00000512143 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
PDGFRA-209ENST00000512143 A2MP01023 1474 aa14.76□□□□□ -0.05
PDGFRA-209ENST00000512143 PZPP20742 1482 aa14.75□□□□□ -0.05
PDGFRA-209ENST00000512143 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
PDGFRA-209ENST00000512143 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
PDGFRA-209ENST00000512143 UNC13BO14795 1591 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms