RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 SNPHO15079 494 aa12.32□□□□□ -0.44
PDE4D-220ENST00000512069 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
PDE4D-220ENST00000512069 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
PDE4D-220ENST00000512069 ST18O60284 1047 aa12.31□□□□□ -0.44
PDE4D-220ENST00000512069 KIF3CO14782 793 aa12.28□□□□□ -0.44
PDE4D-220ENST00000512069 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
PDE4D-220ENST00000512069 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
PDE4D-220ENST00000512069 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
PDE4D-220ENST00000512069 POTEMA6NI47 508 aa12.23□□□□□ -0.45
PDE4D-220ENST00000512069 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
PDE4D-220ENST00000512069 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
PDE4D-220ENST00000512069 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
PDE4D-220ENST00000512069 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
PDE4D-220ENST00000512069 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
PDE4D-220ENST00000512069 CADPS2Q86UW7 1296 aa12.18□□□□□ -0.46
PDE4D-220ENST00000512069 DSG2Q14126 1118 aa12.17□□□□□ -0.46
PDE4D-220ENST00000512069 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
PDE4D-220ENST00000512069 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
PDE4D-220ENST00000512069 FOXK1P85037 733 aa12.15□□□□□ -0.46
PDE4D-220ENST00000512069 PLPP6Q8IY26 295 aa12.15□□□□□ -0.46
PDE4D-220ENST00000512069 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
PDE4D-220ENST00000512069 PDE4AP27815 886 aa12.13□□□□□ -0.47
PDE4D-220ENST00000512069 ARSIQ5FYB1 569 aa12.12□□□□□ -0.47
PDE4D-220ENST00000512069 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
PDE4D-220ENST00000512069 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-220ENST00000512069 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
PDE4D-220ENST00000512069 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDE4D-220ENST00000512069 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
PDE4D-220ENST00000512069 EMP3P54852 163 aa12.1□□□□□ -0.47
PDE4D-220ENST00000512069 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
PDE4D-220ENST00000512069 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
PDE4D-220ENST00000512069 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
PDE4D-220ENST00000512069 SLC34A2O95436 690 aa12.06□□□□□ -0.48
PDE4D-220ENST00000512069 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
PDE4D-220ENST00000512069 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
PDE4D-220ENST00000512069 POTEBQ6S5H4 581 aa12.04□□□□□ -0.48
PDE4D-220ENST00000512069 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
PDE4D-220ENST00000512069 MFSD10Q14728 455 aa12.03□□□□□ -0.48
PDE4D-220ENST00000512069 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
PDE4D-220ENST00000512069 NUDT7P0C024 238 aa12.01□□□□□ -0.49
PDE4D-220ENST00000512069 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
PDE4D-220ENST00000512069 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
PDE4D-220ENST00000512069 ERBB3P21860 1342 aa12.01□□□□□ -0.49
PDE4D-220ENST00000512069 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
PDE4D-220ENST00000512069 PTCD2Q8WV60 388 aaKnown RBP12□□□□□ -0.49
PDE4D-220ENST00000512069 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.49
PDE4D-220ENST00000512069 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
PDE4D-220ENST00000512069 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
PDE4D-220ENST00000512069 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
PDE4D-220ENST00000512069 TBC1D12O60347 775 aa11.93□□□□□ -0.5
PDE4D-220ENST00000512069 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
PDE4D-220ENST00000512069 LHX6Q9UPM6 363 aa11.93□□□□□ -0.5
PDE4D-220ENST00000512069 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
PDE4D-220ENST00000512069 EMILIN3Q9NT22 766 aa11.92□□□□□ -0.5
PDE4D-220ENST00000512069 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
PDE4D-220ENST00000512069 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
PDE4D-220ENST00000512069 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
PDE4D-220ENST00000512069 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
PDE4D-220ENST00000512069 E2F4Q16254 413 aa11.85□□□□□ -0.51
PDE4D-220ENST00000512069 ZNF687Q8N1G0 1237 aa11.84□□□□□ -0.51
PDE4D-220ENST00000512069 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
PDE4D-220ENST00000512069 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
PDE4D-220ENST00000512069 EVI5O60447 810 aa11.83□□□□□ -0.52
PDE4D-220ENST00000512069 DPYSL4O14531 572 aa11.81□□□□□ -0.52
PDE4D-220ENST00000512069 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-220ENST00000512069 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-220ENST00000512069 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
PDE4D-220ENST00000512069 AXIN2Q9Y2T1 843 aa11.77□□□□□ -0.53
PDE4D-220ENST00000512069 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
PDE4D-220ENST00000512069 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
PDE4D-220ENST00000512069 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
PDE4D-220ENST00000512069 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
PDE4D-220ENST00000512069 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
PDE4D-220ENST00000512069 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
PDE4D-220ENST00000512069 FOSBP53539 338 aa11.72□□□□□ -0.53
PDE4D-220ENST00000512069 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
PDE4D-220ENST00000512069 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
PDE4D-220ENST00000512069 PSEN2P49810 448 aa11.69□□□□□ -0.54
PDE4D-220ENST00000512069 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
PDE4D-220ENST00000512069 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
PDE4D-220ENST00000512069 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
PDE4D-220ENST00000512069 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
PDE4D-220ENST00000512069 ARHGAP33O14559 1287 aa11.67□□□□□ -0.54
PDE4D-220ENST00000512069 PBX2P40425 430 aa11.67□□□□□ -0.54
PDE4D-220ENST00000512069 DDX12PQ92771 950 aa11.67□□□□□ -0.54
PDE4D-220ENST00000512069 PCDHGA10Q9Y5H3 936 aa11.67□□□□□ -0.54
PDE4D-220ENST00000512069 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDE4D-220ENST00000512069 PDIA6Q15084 440 aa11.65□□□□□ -0.54
PDE4D-220ENST00000512069 ZDHHC16Q969W1 377 aa11.65□□□□□ -0.54
PDE4D-220ENST00000512069 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
PDE4D-220ENST00000512069 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
PDE4D-220ENST00000512069 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
PDE4D-220ENST00000512069 PTGER2P43116 358 aa11.63□□□□□ -0.55
PDE4D-220ENST00000512069 PHF14O94880 888 aa11.62□□□□□ -0.55
PDE4D-220ENST00000512069 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
PDE4D-220ENST00000512069 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
PDE4D-220ENST00000512069 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
PDE4D-220ENST00000512069 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
PDE4D-220ENST00000512069 PTPREP23469 700 aa11.58□□□□□ -0.56
PDE4D-220ENST00000512069 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms