RNA–Protein interactions for RNA: ENST00000511926.5

NFKB1-210, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-210ENST00000511926 PTPRMP28827 1452 aa26.18■■□□□ 1.78
NFKB1-210ENST00000511926 ZFYVE16Q7Z3T8 1539 aa26.18■■□□□ 1.78
NFKB1-210ENST00000511926 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
NFKB1-210ENST00000511926 MAGI2Q86UL8 1455 aa26.17■■□□□ 1.78
NFKB1-210ENST00000511926 POGZQ7Z3K3 1410 aa26.16■■□□□ 1.78
NFKB1-210ENST00000511926 CCDC18Q5T9S5 1454 aa26.16■■□□□ 1.78
NFKB1-210ENST00000511926 MADDQ8WXG6 1647 aa26.14■■□□□ 1.77
NFKB1-210ENST00000511926 YEATS2Q9ULM3 1422 aa26.14■■□□□ 1.77
NFKB1-210ENST00000511926 ARHGAP5Q13017 1502 aa26.13■■□□□ 1.77
NFKB1-210ENST00000511926 FYCO1Q9BQS8 1478 aa26.11■■□□□ 1.77
NFKB1-210ENST00000511926 RIMS1Q86UR5 1692 aaKnown RBP26.06■■□□□ 1.76
NFKB1-210ENST00000511926 ZNF518AQ6AHZ1 1483 aa26.05■■□□□ 1.76
NFKB1-210ENST00000511926 CDC42BPBQ9Y5S2 1711 aa26.03■■□□□ 1.76
NFKB1-210ENST00000511926 CEP162Q5TB80 1403 aa26.03■■□□□ 1.76
NFKB1-210ENST00000511926 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
NFKB1-210ENST00000511926 MLECQ14165 292 aa26.02■■□□□ 1.76
NFKB1-210ENST00000511926 ATP10AO60312 1499 aa26.02■■□□□ 1.76
NFKB1-210ENST00000511926 PREX2Q70Z35 1606 aa26.01■■□□□ 1.75
NFKB1-210ENST00000511926 MYT1LQ9UL68 1186 aa26.01■■□□□ 1.75
NFKB1-210ENST00000511926 C9orf84Q5VXU9 1444 aa26■■□□□ 1.75
NFKB1-210ENST00000511926 AFAP1Q8N556 730 aa26■■□□□ 1.75
NFKB1-210ENST00000511926 KDM5CP41229 1560 aa25.98■■□□□ 1.75
NFKB1-210ENST00000511926 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
NFKB1-210ENST00000511926 FER1L4A9Z1Z3 1794 aa25.95■■□□□ 1.74
NFKB1-210ENST00000511926 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
NFKB1-210ENST00000511926 ABCC1P33527 1531 aa25.93■■□□□ 1.74
NFKB1-210ENST00000511926 LOC105371045A0A1W2PR82 267 aa25.91■■□□□ 1.74
NFKB1-210ENST00000511926 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
NFKB1-210ENST00000511926 ILDR1Q86SU0 546 aaPredicted RBP25.9■■□□□ 1.74
NFKB1-210ENST00000511926 LMTK3Q96Q04 1460 aa25.9■■□□□ 1.74
NFKB1-210ENST00000511926 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.74
NFKB1-210ENST00000511926 MLH3Q9UHC1 1453 aa25.89■■□□□ 1.73
NFKB1-210ENST00000511926 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
NFKB1-210ENST00000511926 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
NFKB1-210ENST00000511926 ZNF777Q9ULD5 760 aaPredicted RBP25.88■■□□□ 1.73
NFKB1-210ENST00000511926 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
NFKB1-210ENST00000511926 ABCA6Q8N139 1617 aa25.85■■□□□ 1.73
NFKB1-210ENST00000511926 GPATCH8Q9UKJ3 1502 aaKnown RBP25.84■■□□□ 1.73
NFKB1-210ENST00000511926 REREQ9P2R6 1566 aa25.84■■□□□ 1.73
NFKB1-210ENST00000511926 SAMD9LQ8IVG5 1584 aa25.82■■□□□ 1.72
NFKB1-210ENST00000511926 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
NFKB1-210ENST00000511926 CFDP1Q9UEE9 299 aaPredicted RBP25.8■■□□□ 1.72
NFKB1-210ENST00000511926 SYCP2Q9BX26 1530 aa25.79■■□□□ 1.72
NFKB1-210ENST00000511926 KIDINS220Q9ULH0 1771 aa25.78■■□□□ 1.72
NFKB1-210ENST00000511926 HSPA2P54652 639 aa25.77■■□□□ 1.72
NFKB1-210ENST00000511926 VPS8Q8N3P4 1428 aa25.77■■□□□ 1.72
NFKB1-210ENST00000511926 HNRNPMP52272 730 aaKnown RBP eCLIP25.76■■□□□ 1.71
NFKB1-210ENST00000511926 PLEKHH2Q8IVE3 1493 aa25.76■■□□□ 1.71
NFKB1-210ENST00000511926 AGLP35573 1532 aa25.76■■□□□ 1.71
NFKB1-210ENST00000511926 EHBP1L1Q8N3D4 1523 aa25.75■■□□□ 1.71
NFKB1-210ENST00000511926 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
NFKB1-210ENST00000511926 CEBPAP49715 358 aaPredicted RBP25.74■■□□□ 1.71
NFKB1-210ENST00000511926 ESF1Q9H501 851 aaKnown RBP25.74■■□□□ 1.71
NFKB1-210ENST00000511926 KIAA1107Q9UPP5 1409 aa25.73■■□□□ 1.71
NFKB1-210ENST00000511926 PREX1Q8TCU6 1659 aa25.71■■□□□ 1.71
NFKB1-210ENST00000511926 TIAM1Q13009 1591 aa25.69■■□□□ 1.7
NFKB1-210ENST00000511926 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
NFKB1-210ENST00000511926 INO80Q9ULG1 1556 aaPredicted RBP25.64■■□□□ 1.69
NFKB1-210ENST00000511926 C3P01024 1663 aa25.64■■□□□ 1.69
NFKB1-210ENST00000511926 UHRF1BP1Q6BDS2 1440 aa25.63■■□□□ 1.69
NFKB1-210ENST00000511926 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
NFKB1-210ENST00000511926 CNTLNQ9NXG0 1405 aa25.63■■□□□ 1.69
NFKB1-210ENST00000511926 SUPT6HQ7KZ85 1726 aaKnown RBP25.62■■□□□ 1.69
NFKB1-210ENST00000511926 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
NFKB1-210ENST00000511926 ZNF644Q9H582 1327 aaPredicted RBP25.62■■□□□ 1.69
NFKB1-210ENST00000511926 FBXO41Q8TF61 875 aa25.61■■□□□ 1.69
NFKB1-210ENST00000511926 A2MP01023 1474 aa25.6■■□□□ 1.69
NFKB1-210ENST00000511926 APLP2Q06481 763 aa25.59■■□□□ 1.69
NFKB1-210ENST00000511926 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
NFKB1-210ENST00000511926 LRRC9Q6ZRR7 1453 aa25.57■■□□□ 1.68
NFKB1-210ENST00000511926 PLXNC1O60486 1568 aa25.56■■□□□ 1.68
NFKB1-210ENST00000511926 MBD5Q9P267 1494 aa25.56■■□□□ 1.68
NFKB1-210ENST00000511926 RSPH4AQ5TD94 716 aa25.54■■□□□ 1.68
NFKB1-210ENST00000511926 ADGBQ8N7X0 1667 aa25.54■■□□□ 1.68
NFKB1-210ENST00000511926 MROH2AA6NES4 1674 aa25.53■■□□□ 1.68
NFKB1-210ENST00000511926 GGT6Q6P531 493 aa25.51■■□□□ 1.67
NFKB1-210ENST00000511926 RTEL1-TNFRSF6BF6WH68 1400 aa25.51■■□□□ 1.67
NFKB1-210ENST00000511926 CAMSAP2Q08AD1 1489 aa25.5■■□□□ 1.67
NFKB1-210ENST00000511926 ZMYM3Q14202 1370 aa25.5■■□□□ 1.67
NFKB1-210ENST00000511926 CCDC141Q6ZP82 1450 aa25.49■■□□□ 1.67
NFKB1-210ENST00000511926 DMRT2Q9Y5R5 561 aa25.49■■□□□ 1.67
NFKB1-210ENST00000511926 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
NFKB1-210ENST00000511926 STRCQ7RTU9 1775 aa25.47■■□□□ 1.67
NFKB1-210ENST00000511926 NPATQ14207 1427 aa25.46■■□□□ 1.67
NFKB1-210ENST00000511926 KANK4Q5T7N3 995 aaPredicted RBP25.45■■□□□ 1.66
NFKB1-210ENST00000511926 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
NFKB1-210ENST00000511926 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
NFKB1-210ENST00000511926 CERKQ8TCT0 537 aa25.42■■□□□ 1.66
NFKB1-210ENST00000511926 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
NFKB1-210ENST00000511926 TSPY4P0CV99 314 aa25.4■■□□□ 1.66
NFKB1-210ENST00000511926 TSPY10P0CW01 314 aa25.4■■□□□ 1.66
NFKB1-210ENST00000511926 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.66
NFKB1-210ENST00000511926 MYOM3Q5VTT5 1437 aa25.37■■□□□ 1.65
NFKB1-210ENST00000511926 KIF3BO15066 747 aa25.37■■□□□ 1.65
NFKB1-210ENST00000511926 PTPRTO14522 1441 aa25.37■■□□□ 1.65
NFKB1-210ENST00000511926 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
NFKB1-210ENST00000511926 NCOA1Q15788 1441 aa25.35■■□□□ 1.65
NFKB1-210ENST00000511926 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
NFKB1-210ENST00000511926 MYO3AQ8NEV4 1616 aa25.34■■□□□ 1.65
NFKB1-210ENST00000511926 ZNF142P52746 1687 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms