RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 TMC2Q8TDI7 906 aa14.14□□□□□ -0.15
LINC01088-208ENST00000511895 MAMSTRQ6ZN01 415 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 WDR70Q9NW82 654 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
LINC01088-208ENST00000511895 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
LINC01088-208ENST00000511895 LHX8Q68G74 356 aa14.09□□□□□ -0.15
LINC01088-208ENST00000511895 CRISPLD2Q9H0B8 497 aa14.09□□□□□ -0.15
LINC01088-208ENST00000511895 C2orf72A6NCS6 295 aa14.07□□□□□ -0.16
LINC01088-208ENST00000511895 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-208ENST00000511895 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
LINC01088-208ENST00000511895 DDX27Q96GQ7 796 aaKnown RBP14.05□□□□□ -0.16
LINC01088-208ENST00000511895 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
LINC01088-208ENST00000511895 PPP1R15BQ5SWA1 713 aa14.01□□□□□ -0.17
LINC01088-208ENST00000511895 KIF3CO14782 793 aa14□□□□□ -0.17
LINC01088-208ENST00000511895 DSG2Q14126 1118 aa14□□□□□ -0.17
LINC01088-208ENST00000511895 MFSD10Q14728 455 aa13.99□□□□□ -0.17
LINC01088-208ENST00000511895 FOXK1P85037 733 aa13.97□□□□□ -0.17
LINC01088-208ENST00000511895 PLPP6Q8IY26 295 aa13.97□□□□□ -0.17
LINC01088-208ENST00000511895 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
LINC01088-208ENST00000511895 E2F4Q16254 413 aa13.92□□□□□ -0.18
LINC01088-208ENST00000511895 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
LINC01088-208ENST00000511895 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
LINC01088-208ENST00000511895 CAMK2BQ13554 666 aa13.83□□□□□ -0.2
LINC01088-208ENST00000511895 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01088-208ENST00000511895 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
LINC01088-208ENST00000511895 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
LINC01088-208ENST00000511895 SNPHO15079 494 aa13.79□□□□□ -0.2
LINC01088-208ENST00000511895 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
LINC01088-208ENST00000511895 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
LINC01088-208ENST00000511895 MAP3K9P80192 1104 aa13.76□□□□□ -0.21
LINC01088-208ENST00000511895 ARHGEF1Q92888 912 aaKnown RBP13.76□□□□□ -0.21
LINC01088-208ENST00000511895 DPYSL4O14531 572 aa13.75□□□□□ -0.21
LINC01088-208ENST00000511895 TBC1D12O60347 775 aa13.75□□□□□ -0.21
LINC01088-208ENST00000511895 SLC34A2O95436 690 aa13.75□□□□□ -0.21
LINC01088-208ENST00000511895 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
LINC01088-208ENST00000511895 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
LINC01088-208ENST00000511895 NBR1Q14596 966 aa13.72□□□□□ -0.21
LINC01088-208ENST00000511895 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
LINC01088-208ENST00000511895 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
LINC01088-208ENST00000511895 ARIH1Q9Y4X5 557 aaPredicted RBP13.69□□□□□ -0.22
LINC01088-208ENST00000511895 ARSIQ5FYB1 569 aa13.67□□□□□ -0.22
LINC01088-208ENST00000511895 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-208ENST00000511895 BCANQ96GW7 911 aa13.66□□□□□ -0.22
LINC01088-208ENST00000511895 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
LINC01088-208ENST00000511895 SPDYE16A6NNV3 312 aaPredicted RBP13.64□□□□□ -0.23
LINC01088-208ENST00000511895 EVI5O60447 810 aa13.64□□□□□ -0.23
LINC01088-208ENST00000511895 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01088-208ENST00000511895 PDIA6Q15084 440 aa13.62□□□□□ -0.23
LINC01088-208ENST00000511895 FAM163AQ96GL9 167 aaPredicted RBP13.62□□□□□ -0.23
LINC01088-208ENST00000511895 NUDT7P0C024 238 aa13.61□□□□□ -0.23
LINC01088-208ENST00000511895 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
LINC01088-208ENST00000511895 SEMA3EO15041 775 aa13.59□□□□□ -0.23
LINC01088-208ENST00000511895 ST18O60284 1047 aa13.57□□□□□ -0.24
LINC01088-208ENST00000511895 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-208ENST00000511895 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
LINC01088-208ENST00000511895 DDX12PQ92771 950 aa13.52□□□□□ -0.25
LINC01088-208ENST00000511895 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
LINC01088-208ENST00000511895 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
LINC01088-208ENST00000511895 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
LINC01088-208ENST00000511895 KDM4FA0A1W2PPD8 638 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
LINC01088-208ENST00000511895 EMP3P54852 163 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 SMYD5Q6GMV2 418 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 PTGER2P43116 358 aa13.47□□□□□ -0.25
LINC01088-208ENST00000511895 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
LINC01088-208ENST00000511895 ERBB3P21860 1342 aa13.44□□□□□ -0.26
LINC01088-208ENST00000511895 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
LINC01088-208ENST00000511895 PHF14O94880 888 aa13.42□□□□□ -0.26
LINC01088-208ENST00000511895 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
LINC01088-208ENST00000511895 FOSBP53539 338 aa13.41□□□□□ -0.26
LINC01088-208ENST00000511895 PCDHGA10Q9Y5H3 936 aa13.41□□□□□ -0.26
LINC01088-208ENST00000511895 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
LINC01088-208ENST00000511895 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
LINC01088-208ENST00000511895 LCE2DQ5TA82 110 aaPredicted RBP13.4□□□□□ -0.26
LINC01088-208ENST00000511895 EPAS1Q99814 870 aa13.4□□□□□ -0.26
LINC01088-208ENST00000511895 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
LINC01088-208ENST00000511895 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
LINC01088-208ENST00000511895 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
LINC01088-208ENST00000511895 OSBPP22059 807 aa13.37□□□□□ -0.27
LINC01088-208ENST00000511895 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
LINC01088-208ENST00000511895 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
LINC01088-208ENST00000511895 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
LINC01088-208ENST00000511895 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
LINC01088-208ENST00000511895 MAP3K7O43318 606 aa13.34□□□□□ -0.27
LINC01088-208ENST00000511895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC01088-208ENST00000511895 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
LINC01088-208ENST00000511895 HS3ST6Q96QI5 342 aa13.32□□□□□ -0.28
LINC01088-208ENST00000511895 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
LINC01088-208ENST00000511895 ADAM33Q9BZ11 813 aa13.31□□□□□ -0.28
LINC01088-208ENST00000511895 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
LINC01088-208ENST00000511895 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
LINC01088-208ENST00000511895 TSR1Q2NL82 804 aaKnown RBP13.26□□□□□ -0.29
LINC01088-208ENST00000511895 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
LINC01088-208ENST00000511895 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
LINC01088-208ENST00000511895 PTPREP23469 700 aa13.25□□□□□ -0.29
LINC01088-208ENST00000511895 C6orf132Q5T0Z8 1188 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms