RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 TMC2Q8TDI7 906 aa14.14□□□□□ -0.15
LINC01088-208ENST00000511895 MAMSTRQ6ZN01 415 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 WDR70Q9NW82 654 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
LINC01088-208ENST00000511895 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
LINC01088-208ENST00000511895 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
LINC01088-208ENST00000511895 LHX8Q68G74 356 aa14.09□□□□□ -0.15
LINC01088-208ENST00000511895 CRISPLD2Q9H0B8 497 aa14.09□□□□□ -0.15
LINC01088-208ENST00000511895 C2orf72A6NCS6 295 aa14.07□□□□□ -0.16
LINC01088-208ENST00000511895 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-208ENST00000511895 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
LINC01088-208ENST00000511895 DDX27Q96GQ7 796 aaKnown RBP14.05□□□□□ -0.16
LINC01088-208ENST00000511895 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
LINC01088-208ENST00000511895 PPP1R15BQ5SWA1 713 aa14.01□□□□□ -0.17
LINC01088-208ENST00000511895 KIF3CO14782 793 aa14□□□□□ -0.17
LINC01088-208ENST00000511895 DSG2Q14126 1118 aa14□□□□□ -0.17
LINC01088-208ENST00000511895 MFSD10Q14728 455 aa13.99□□□□□ -0.17
LINC01088-208ENST00000511895 FOXK1P85037 733 aa13.97□□□□□ -0.17
LINC01088-208ENST00000511895 PLPP6Q8IY26 295 aa13.97□□□□□ -0.17
LINC01088-208ENST00000511895 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
LINC01088-208ENST00000511895 E2F4Q16254 413 aa13.92□□□□□ -0.18
LINC01088-208ENST00000511895 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
LINC01088-208ENST00000511895 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
LINC01088-208ENST00000511895 CAMK2BQ13554 666 aa13.83□□□□□ -0.2
LINC01088-208ENST00000511895 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01088-208ENST00000511895 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
LINC01088-208ENST00000511895 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
LINC01088-208ENST00000511895 SNPHO15079 494 aa13.79□□□□□ -0.2
LINC01088-208ENST00000511895 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
LINC01088-208ENST00000511895 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
LINC01088-208ENST00000511895 MAP3K9P80192 1104 aa13.76□□□□□ -0.21
LINC01088-208ENST00000511895 ARHGEF1Q92888 912 aaKnown RBP13.76□□□□□ -0.21
LINC01088-208ENST00000511895 DPYSL4O14531 572 aa13.75□□□□□ -0.21
LINC01088-208ENST00000511895 TBC1D12O60347 775 aa13.75□□□□□ -0.21
LINC01088-208ENST00000511895 SLC34A2O95436 690 aa13.75□□□□□ -0.21
LINC01088-208ENST00000511895 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
LINC01088-208ENST00000511895 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
LINC01088-208ENST00000511895 NBR1Q14596 966 aa13.72□□□□□ -0.21
LINC01088-208ENST00000511895 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
LINC01088-208ENST00000511895 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
LINC01088-208ENST00000511895 ARIH1Q9Y4X5 557 aaPredicted RBP13.69□□□□□ -0.22
LINC01088-208ENST00000511895 ARSIQ5FYB1 569 aa13.67□□□□□ -0.22
LINC01088-208ENST00000511895 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-208ENST00000511895 BCANQ96GW7 911 aa13.66□□□□□ -0.22
LINC01088-208ENST00000511895 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
LINC01088-208ENST00000511895 SPDYE16A6NNV3 312 aaPredicted RBP13.64□□□□□ -0.23
LINC01088-208ENST00000511895 EVI5O60447 810 aa13.64□□□□□ -0.23
LINC01088-208ENST00000511895 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01088-208ENST00000511895 PDIA6Q15084 440 aa13.62□□□□□ -0.23
LINC01088-208ENST00000511895 FAM163AQ96GL9 167 aaPredicted RBP13.62□□□□□ -0.23
LINC01088-208ENST00000511895 NUDT7P0C024 238 aa13.61□□□□□ -0.23
LINC01088-208ENST00000511895 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
LINC01088-208ENST00000511895 SEMA3EO15041 775 aa13.59□□□□□ -0.23
LINC01088-208ENST00000511895 ST18O60284 1047 aa13.57□□□□□ -0.24
LINC01088-208ENST00000511895 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-208ENST00000511895 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
LINC01088-208ENST00000511895 DDX12PQ92771 950 aa13.52□□□□□ -0.25
LINC01088-208ENST00000511895 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
LINC01088-208ENST00000511895 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
LINC01088-208ENST00000511895 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
LINC01088-208ENST00000511895 KDM4FA0A1W2PPD8 638 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
LINC01088-208ENST00000511895 EMP3P54852 163 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 SMYD5Q6GMV2 418 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
LINC01088-208ENST00000511895 PTGER2P43116 358 aa13.47□□□□□ -0.25
LINC01088-208ENST00000511895 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
LINC01088-208ENST00000511895 ERBB3P21860 1342 aa13.44□□□□□ -0.26
LINC01088-208ENST00000511895 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
LINC01088-208ENST00000511895 PHF14O94880 888 aa13.42□□□□□ -0.26
LINC01088-208ENST00000511895 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
LINC01088-208ENST00000511895 FOSBP53539 338 aa13.41□□□□□ -0.26
LINC01088-208ENST00000511895 PCDHGA10Q9Y5H3 936 aa13.41□□□□□ -0.26
LINC01088-208ENST00000511895 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
LINC01088-208ENST00000511895 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
LINC01088-208ENST00000511895 LCE2DQ5TA82 110 aaPredicted RBP13.4□□□□□ -0.26
LINC01088-208ENST00000511895 EPAS1Q99814 870 aa13.4□□□□□ -0.26
LINC01088-208ENST00000511895 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
LINC01088-208ENST00000511895 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
LINC01088-208ENST00000511895 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
LINC01088-208ENST00000511895 OSBPP22059 807 aa13.37□□□□□ -0.27
LINC01088-208ENST00000511895 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
LINC01088-208ENST00000511895 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
LINC01088-208ENST00000511895 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
LINC01088-208ENST00000511895 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
LINC01088-208ENST00000511895 MAP3K7O43318 606 aa13.34□□□□□ -0.27
LINC01088-208ENST00000511895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC01088-208ENST00000511895 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
LINC01088-208ENST00000511895 HS3ST6Q96QI5 342 aa13.32□□□□□ -0.28
LINC01088-208ENST00000511895 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
LINC01088-208ENST00000511895 ADAM33Q9BZ11 813 aa13.31□□□□□ -0.28
LINC01088-208ENST00000511895 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
LINC01088-208ENST00000511895 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
LINC01088-208ENST00000511895 TSR1Q2NL82 804 aaKnown RBP13.26□□□□□ -0.29
LINC01088-208ENST00000511895 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
LINC01088-208ENST00000511895 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
LINC01088-208ENST00000511895 PTPREP23469 700 aa13.25□□□□□ -0.29
LINC01088-208ENST00000511895 C6orf132Q5T0Z8 1188 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms