RNA–Protein interactions for RNA: ENST00000511463.1

APBB3-218, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 3

Gene APBB3, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-218	ENST00000511463	ADGRL1	O94910	1474 aa		28.63	■■■□□ 2.17
APBB3-218	ENST00000511463	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.63	■■■□□ 2.17
APBB3-218	ENST00000511463	FRMPD1	Q5SYB0	1578 aa		28.62	■■■□□ 2.17
APBB3-218	ENST00000511463	DENND4B	O75064	1496 aa	Predicted RBP	28.61	■■■□□ 2.17
APBB3-218	ENST00000511463	LRRC9	Q6ZRR7	1453 aa		28.61	■■■□□ 2.17
APBB3-218	ENST00000511463	RICTOR	Q6R327	1708 aa		28.6	■■■□□ 2.17
APBB3-218	ENST00000511463	GPATCH8	Q9UKJ3	1502 aa	Known RBP	28.59	■■■□□ 2.17
APBB3-218	ENST00000511463	ITSN2	Q9NZM3	1697 aa		28.58	■■■□□ 2.17
APBB3-218	ENST00000511463	CCNB3	Q8WWL7	1395 aa		28.57	■■■□□ 2.16
APBB3-218	ENST00000511463	SCAPER	Q9BY12	1400 aa		28.55	■■■□□ 2.16
APBB3-218	ENST00000511463	RAPGEF3	O95398	923 aa		28.55	■■■□□ 2.16
APBB3-218	ENST00000511463	NCOA2	Q15596	1464 aa		28.54	■■■□□ 2.16
APBB3-218	ENST00000511463	APLP2	Q06481	763 aa		28.54	■■■□□ 2.16
APBB3-218	ENST00000511463	ABCC1	P33527	1531 aa		28.53	■■■□□ 2.16
APBB3-218	ENST00000511463	POGZ	Q7Z3K3	1410 aa		28.53	■■■□□ 2.16
APBB3-218	ENST00000511463	ZMYM4	Q5VZL5	1548 aa		28.52	■■■□□ 2.16
APBB3-218	ENST00000511463	SAMD9L	Q8IVG5	1584 aa		28.5	■■■□□ 2.15
APBB3-218	ENST00000511463	KANK4	Q5T7N3	995 aa	Predicted RBP	28.47	■■■□□ 2.15
APBB3-218	ENST00000511463	ZNF518A	Q6AHZ1	1483 aa		28.46	■■■□□ 2.15
APBB3-218	ENST00000511463	ARHGEF40	Q8TER5	1519 aa		28.45	■■■□□ 2.15
APBB3-218	ENST00000511463	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.45	■■■□□ 2.14
APBB3-218	ENST00000511463	KDM5C	P41229	1560 aa		28.43	■■■□□ 2.14
APBB3-218	ENST00000511463	PLEKHH2	Q8IVE3	1493 aa		28.43	■■■□□ 2.14
APBB3-218	ENST00000511463	MAGI2	Q86UL8	1455 aa		28.42	■■■□□ 2.14
APBB3-218	ENST00000511463	ZNF777	Q9ULD5	760 aa	Predicted RBP	28.42	■■■□□ 2.14
APBB3-218	ENST00000511463	ZFYVE16	Q7Z3T8	1539 aa		28.42	■■■□□ 2.14
APBB3-218	ENST00000511463	SYCP2	Q9BX26	1530 aa		28.42	■■■□□ 2.14
APBB3-218	ENST00000511463	ARHGEF12	Q9NZN5	1544 aa		28.42	■■■□□ 2.14
APBB3-218	ENST00000511463	HECW2	Q9P2P5	1572 aa		28.37	■■■□□ 2.13
APBB3-218	ENST00000511463	KIAA1107	Q9UPP5	1409 aa		28.37	■■■□□ 2.13
APBB3-218	ENST00000511463	TRAPPC8	Q9Y2L5	1435 aa		28.36	■■■□□ 2.13
APBB3-218	ENST00000511463	YEATS2	Q9ULM3	1422 aa		28.33	■■■□□ 2.13
APBB3-218	ENST00000511463	AFAP1	Q8N556	730 aa		28.32	■■■□□ 2.12
APBB3-218	ENST00000511463	MYOM3	Q5VTT5	1437 aa		28.32	■■■□□ 2.12
APBB3-218	ENST00000511463	CAMSAP2	Q08AD1	1489 aa		28.32	■■■□□ 2.12
APBB3-218	ENST00000511463	MLH3	Q9UHC1	1453 aa		28.3	■■■□□ 2.12
APBB3-218	ENST00000511463	ZNF644	Q9H582	1327 aa	Predicted RBP	28.28	■■■□□ 2.12
APBB3-218	ENST00000511463	MIA2	Q96PC5	1412 aa		28.27	■■■□□ 2.12
APBB3-218	ENST00000511463	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.27	■■■□□ 2.12
APBB3-218	ENST00000511463	ABCA6	Q8N139	1617 aa		28.25	■■■□□ 2.11
APBB3-218	ENST00000511463	DIP2C	Q9Y2E4	1556 aa		28.25	■■■□□ 2.11
APBB3-218	ENST00000511463	MBD5	Q9P267	1494 aa		28.25	■■■□□ 2.11
APBB3-218	ENST00000511463	KIDINS220	Q9ULH0	1771 aa		28.24	■■■□□ 2.11
APBB3-218	ENST00000511463	MYT1L	Q9UL68	1186 aa		28.24	■■■□□ 2.11
APBB3-218	ENST00000511463	INO80	Q9ULG1	1556 aa	Predicted RBP	28.24	■■■□□ 2.11
APBB3-218	ENST00000511463	ATP10A	O60312	1499 aa		28.23	■■■□□ 2.11
APBB3-218	ENST00000511463	C9orf84	Q5VXU9	1444 aa		28.23	■■■□□ 2.11
APBB3-218	ENST00000511463	ARHGEF5	Q12774	1597 aa		28.21	■■■□□ 2.11
APBB3-218	ENST00000511463	ATP7A	Q04656	1500 aa		28.21	■■■□□ 2.11
APBB3-218	ENST00000511463	CCDC141	Q6ZP82	1450 aa		28.21	■■■□□ 2.11
APBB3-218	ENST00000511463	KDM4F	A0A1W2PPD8	638 aa		28.2	■■■□□ 2.1
APBB3-218	ENST00000511463	SIGLEC1	Q9BZZ2	1709 aa		28.2	■■■□□ 2.1
APBB3-218	ENST00000511463	RERE	Q9P2R6	1566 aa		28.2	■■■□□ 2.1
APBB3-218	ENST00000511463	SPAG9	O60271	1321 aa	Known RBP	28.19	■■■□□ 2.1
APBB3-218	ENST00000511463	BCORL1	Q5H9F3	1711 aa		28.18	■■■□□ 2.1
APBB3-218	ENST00000511463	PTPN23	Q9H3S7	1636 aa		28.18	■■■□□ 2.1
APBB3-218	ENST00000511463	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.18	■■■□□ 2.1
APBB3-218	ENST00000511463	FGD6	Q6ZV73	1430 aa		28.17	■■■□□ 2.1
APBB3-218	ENST00000511463	RSPH4A	Q5TD94	716 aa		28.13	■■■□□ 2.09
APBB3-218	ENST00000511463	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.13	■■■□□ 2.09
APBB3-218	ENST00000511463	ADAMTSL3	P82987	1691 aa		28.13	■■■□□ 2.09
APBB3-218	ENST00000511463	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.11	■■■□□ 2.09
APBB3-218	ENST00000511463	TCOF1	Q13428	1488 aa	Known RBP	28.11	■■■□□ 2.09
APBB3-218	ENST00000511463	ADGB	Q8N7X0	1667 aa		28.09	■■■□□ 2.09
APBB3-218	ENST00000511463	AGL	P35573	1532 aa		28.07	■■■□□ 2.08
APBB3-218	ENST00000511463	MAST1	Q9Y2H9	1570 aa		28.07	■■■□□ 2.08
APBB3-218	ENST00000511463	MADD	Q8WXG6	1647 aa		28.07	■■■□□ 2.08
APBB3-218	ENST00000511463	CROCC2	H7BZ55	1655 aa		28.05	■■■□□ 2.08
APBB3-218	ENST00000511463	PLXNC1	O60486	1568 aa		28.05	■■■□□ 2.08
APBB3-218	ENST00000511463	DNMT1	P26358	1616 aa	Known RBP	28.03	■■■□□ 2.08
APBB3-218	ENST00000511463	A2M	P01023	1474 aa		28.02	■■■□□ 2.08
APBB3-218	ENST00000511463	TSPY4	P0CV99	314 aa		28.02	■■■□□ 2.08
APBB3-218	ENST00000511463	TSPY10	P0CW01	314 aa		28.02	■■■□□ 2.08
APBB3-218	ENST00000511463	PPARGC1B	Q86YN6	1023 aa	Known RBP	28	■■■□□ 2.07
APBB3-218	ENST00000511463	FER1L4	A9Z1Z3	1794 aa		28	■■■□□ 2.07
APBB3-218	ENST00000511463	SHANK2	Q9UPX8	1470 aa		28	■■■□□ 2.07
APBB3-218	ENST00000511463	RIMS1	Q86UR5	1692 aa	Known RBP	27.98	■■■□□ 2.07
APBB3-218	ENST00000511463	DAPK1	P53355	1430 aa		27.98	■■■□□ 2.07
APBB3-218	ENST00000511463	MLEC	Q14165	292 aa		27.97	■■■□□ 2.07
APBB3-218	ENST00000511463	ABCC5	O15440	1437 aa		27.96	■■■□□ 2.07
APBB3-218	ENST00000511463	PTPRM	P28827	1452 aa		27.94	■■■□□ 2.06
APBB3-218	ENST00000511463	FAM50A	Q14320	339 aa	Known RBP	27.92	■■■□□ 2.06
APBB3-218	ENST00000511463	DHX29	Q7Z478	1369 aa	Known RBP	27.91	■■■□□ 2.06
APBB3-218	ENST00000511463	DUOX2	Q9NRD8	1548 aa		27.84	■■■□□ 2.05
APBB3-218	ENST00000511463	EIF2AK4	Q9P2K8	1649 aa	Known RBP	27.84	■■■□□ 2.05
APBB3-218	ENST00000511463	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
APBB3-218	ENST00000511463	KIF15	Q9NS87	1388 aa		27.81	■■■□□ 2.04
APBB3-218	ENST00000511463	ADGRL2	O95490	1459 aa		27.81	■■■□□ 2.04
APBB3-218	ENST00000511463	ESF1	Q9H501	851 aa	Known RBP	27.8	■■■□□ 2.04
APBB3-218	ENST00000511463	ANKRD30A	Q9BXX3	1397 aa		27.8	■■■□□ 2.04
APBB3-218	ENST00000511463	CNTLN	Q9NXG0	1405 aa		27.8	■■■□□ 2.04
APBB3-218	ENST00000511463	RRBP1	Q9P2E9	1410 aa	Known RBP	27.8	■■■□□ 2.04
APBB3-218	ENST00000511463	MROH2A	A6NES4	1674 aa		27.78	■■■□□ 2.04
APBB3-218	ENST00000511463	RNF17	Q9BXT8	1623 aa	Known RBP	27.77	■■■□□ 2.04
APBB3-218	ENST00000511463	ERBIN	Q96RT1	1412 aa		27.76	■■■□□ 2.04
APBB3-218	ENST00000511463	CLTC	Q00610	1675 aa	Known RBP	27.76	■■■□□ 2.03
APBB3-218	ENST00000511463	KIF3B	O15066	747 aa		27.76	■■■□□ 2.03
APBB3-218	ENST00000511463	GGT6	Q6P531	493 aa		27.76	■■■□□ 2.03
APBB3-218	ENST00000511463	CHIC2	Q9UKJ5	165 aa		27.76	■■■□□ 2.03
APBB3-218	ENST00000511463	FAM135A	Q9P2D6	1515 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms