RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
HMGB3P13-201ENST00000511263 ERBB3P21860 1342 aa11.12□□□□□ -0.63
HMGB3P13-201ENST00000511263 PKD2Q13563 968 aa11.12□□□□□ -0.63
HMGB3P13-201ENST00000511263 BCL11BQ9C0K0 894 aaPredicted RBP11.11□□□□□ -0.63
HMGB3P13-201ENST00000511263 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
HMGB3P13-201ENST00000511263 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
HMGB3P13-201ENST00000511263 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
HMGB3P13-201ENST00000511263 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
HMGB3P13-201ENST00000511263 STK24Q9Y6E0 443 aa11.06□□□□□ -0.64
HMGB3P13-201ENST00000511263 NLRP6P59044 892 aa11.05□□□□□ -0.64
HMGB3P13-201ENST00000511263 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
HMGB3P13-201ENST00000511263 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
HMGB3P13-201ENST00000511263 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
HMGB3P13-201ENST00000511263 STK25O00506 426 aa11.01□□□□□ -0.65
HMGB3P13-201ENST00000511263 ARSIQ5FYB1 569 aa11.01□□□□□ -0.65
HMGB3P13-201ENST00000511263 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.65
HMGB3P13-201ENST00000511263 RGL2O15211 777 aa10.97□□□□□ -0.65
HMGB3P13-201ENST00000511263 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
HMGB3P13-201ENST00000511263 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
HMGB3P13-201ENST00000511263 KIF3CO14782 793 aa10.94□□□□□ -0.66
HMGB3P13-201ENST00000511263 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
HMGB3P13-201ENST00000511263 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
HMGB3P13-201ENST00000511263 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
HMGB3P13-201ENST00000511263 PPP1R37O75864 691 aa10.87□□□□□ -0.67
HMGB3P13-201ENST00000511263 NUDT7P0C024 238 aa10.86□□□□□ -0.67
HMGB3P13-201ENST00000511263 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
HMGB3P13-201ENST00000511263 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
HMGB3P13-201ENST00000511263 HS6ST3Q8IZP7 471 aa10.82□□□□□ -0.68
HMGB3P13-201ENST00000511263 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
HMGB3P13-201ENST00000511263 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
HMGB3P13-201ENST00000511263 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
HMGB3P13-201ENST00000511263 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
HMGB3P13-201ENST00000511263 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
HMGB3P13-201ENST00000511263 LHX6Q9UPM6 363 aa10.8□□□□□ -0.68
HMGB3P13-201ENST00000511263 SLC34A2O95436 690 aa10.79□□□□□ -0.68
HMGB3P13-201ENST00000511263 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
HMGB3P13-201ENST00000511263 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
HMGB3P13-201ENST00000511263 BBXQ8WY36 941 aaPredicted RBP10.75□□□□□ -0.69
HMGB3P13-201ENST00000511263 PTGER2P43116 358 aa10.74□□□□□ -0.69
HMGB3P13-201ENST00000511263 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
HMGB3P13-201ENST00000511263 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
HMGB3P13-201ENST00000511263 PBX2P40425 430 aa10.7□□□□□ -0.7
HMGB3P13-201ENST00000511263 PLPP6Q8IY26 295 aa10.67□□□□□ -0.7
HMGB3P13-201ENST00000511263 PTCD2Q8WV60 388 aaKnown RBP10.66□□□□□ -0.7
HMGB3P13-201ENST00000511263 FOXK1P85037 733 aa10.65□□□□□ -0.7
HMGB3P13-201ENST00000511263 DSG2Q14126 1118 aa10.65□□□□□ -0.7
HMGB3P13-201ENST00000511263 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
HMGB3P13-201ENST00000511263 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
HMGB3P13-201ENST00000511263 ARHGAP33O14559 1287 aa10.62□□□□□ -0.71
HMGB3P13-201ENST00000511263 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
HMGB3P13-201ENST00000511263 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
HMGB3P13-201ENST00000511263 SPRYD3Q8NCJ5 442 aa10.62□□□□□ -0.71
HMGB3P13-201ENST00000511263 PSEN2P49810 448 aa10.61□□□□□ -0.71
HMGB3P13-201ENST00000511263 PSDA5PKW4 1024 aaPredicted RBP10.58□□□□□ -0.72
HMGB3P13-201ENST00000511263 HRO43593 1189 aa10.54□□□□□ -0.72
HMGB3P13-201ENST00000511263 PAXIP1Q6ZW49 1069 aaPredicted RBP10.54□□□□□ -0.72
HMGB3P13-201ENST00000511263 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
HMGB3P13-201ENST00000511263 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
HMGB3P13-201ENST00000511263 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGB3P13-201ENST00000511263 TK2O00142 265 aa10.52□□□□□ -0.73
HMGB3P13-201ENST00000511263 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
HMGB3P13-201ENST00000511263 TBC1D12O60347 775 aa10.51□□□□□ -0.73
HMGB3P13-201ENST00000511263 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
HMGB3P13-201ENST00000511263 CRISPLD2Q9H0B8 497 aa10.51□□□□□ -0.73
HMGB3P13-201ENST00000511263 HCSTQ9UBK5 93 aa10.51□□□□□ -0.73
HMGB3P13-201ENST00000511263 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
HMGB3P13-201ENST00000511263 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
HMGB3P13-201ENST00000511263 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
HMGB3P13-201ENST00000511263 NCKAP5LQ9HCH0 1330 aa10.48□□□□□ -0.73
HMGB3P13-201ENST00000511263 KCTD12Q96CX2 325 aaKnown RBP10.47□□□□□ -0.73
HMGB3P13-201ENST00000511263 PPP1R15BQ5SWA1 713 aa10.46□□□□□ -0.73
HMGB3P13-201ENST00000511263 ZNF454Q8N9F8 522 aa10.45□□□□□ -0.74
HMGB3P13-201ENST00000511263 VPS9D1Q9Y2B5 631 aa10.44□□□□□ -0.74
HMGB3P13-201ENST00000511263 BCL2L12Q9HB09 334 aa10.41□□□□□ -0.74
HMGB3P13-201ENST00000511263 FOSBP53539 338 aa10.4□□□□□ -0.74
HMGB3P13-201ENST00000511263 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
HMGB3P13-201ENST00000511263 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
HMGB3P13-201ENST00000511263 PDE4AP27815 886 aa10.37□□□□□ -0.75
HMGB3P13-201ENST00000511263 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
HMGB3P13-201ENST00000511263 EVI5O60447 810 aa10.36□□□□□ -0.75
HMGB3P13-201ENST00000511263 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
HMGB3P13-201ENST00000511263 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
HMGB3P13-201ENST00000511263 PTPN5P54829 565 aa10.35□□□□□ -0.75
HMGB3P13-201ENST00000511263 ADAM33Q9BZ11 813 aa10.35□□□□□ -0.75
HMGB3P13-201ENST00000511263 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
HMGB3P13-201ENST00000511263 PTPREP23469 700 aa10.34□□□□□ -0.75
HMGB3P13-201ENST00000511263 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
HMGB3P13-201ENST00000511263 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
HMGB3P13-201ENST00000511263 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
HMGB3P13-201ENST00000511263 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
HMGB3P13-201ENST00000511263 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
HMGB3P13-201ENST00000511263 MFSD10Q14728 455 aa10.31□□□□□ -0.76
HMGB3P13-201ENST00000511263 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
HMGB3P13-201ENST00000511263 CADPS2Q86UW7 1296 aa10.3□□□□□ -0.76
HMGB3P13-201ENST00000511263 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
HMGB3P13-201ENST00000511263 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
HMGB3P13-201ENST00000511263 MAP3K9P80192 1104 aa10.28□□□□□ -0.76
HMGB3P13-201ENST00000511263 WNT2BQ93097 391 aa10.26□□□□□ -0.77
HMGB3P13-201ENST00000511263 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
HMGB3P13-201ENST00000511263 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms