RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 CDC42BPBQ9Y5S2 1711 aa23.31■■□□□ 1.32
COL12A1-210ENST00000511023 ZMYM4Q5VZL5 1548 aa23.29■■□□□ 1.32
COL12A1-210ENST00000511023 POGZQ7Z3K3 1410 aa23.29■■□□□ 1.32
COL12A1-210ENST00000511023 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
COL12A1-210ENST00000511023 CDC42BPAQ5VT25 1732 aa23.27■■□□□ 1.32
COL12A1-210ENST00000511023 ARHGEF40Q8TER5 1519 aa23.27■■□□□ 1.32
COL12A1-210ENST00000511023 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
COL12A1-210ENST00000511023 YEATS2Q9ULM3 1422 aa23.24■■□□□ 1.31
COL12A1-210ENST00000511023 VPS8Q8N3P4 1428 aa23.23■■□□□ 1.31
COL12A1-210ENST00000511023 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
COL12A1-210ENST00000511023 ZFYVE16Q7Z3T8 1539 aa23.22■■□□□ 1.31
COL12A1-210ENST00000511023 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
COL12A1-210ENST00000511023 ARHGEF12Q9NZN5 1544 aa23.2■■□□□ 1.3
COL12A1-210ENST00000511023 ABCC1P33527 1531 aa23.19■■□□□ 1.3
COL12A1-210ENST00000511023 EHBP1L1Q8N3D4 1523 aa23.19■■□□□ 1.3
COL12A1-210ENST00000511023 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
COL12A1-210ENST00000511023 ZNF518AQ6AHZ1 1483 aa23.17■■□□□ 1.3
COL12A1-210ENST00000511023 SIGLEC1Q9BZZ2 1709 aa23.17■■□□□ 1.3
COL12A1-210ENST00000511023 KDM5CP41229 1560 aa23.17■■□□□ 1.3
COL12A1-210ENST00000511023 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
COL12A1-210ENST00000511023 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
COL12A1-210ENST00000511023 TIAM1Q13009 1591 aa23.15■■□□□ 1.3
COL12A1-210ENST00000511023 SAMD9LQ8IVG5 1584 aa23.15■■□□□ 1.3
COL12A1-210ENST00000511023 ITSN2Q9NZM3 1697 aa23.15■■□□□ 1.3
COL12A1-210ENST00000511023 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.3
COL12A1-210ENST00000511023 BCORL1Q5H9F3 1711 aa23.14■■□□□ 1.3
COL12A1-210ENST00000511023 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
COL12A1-210ENST00000511023 ZNF777Q9ULD5 760 aaPredicted RBP23.12■■□□□ 1.29
COL12A1-210ENST00000511023 CFDP1Q9UEE9 299 aaPredicted RBP23.1■■□□□ 1.29
COL12A1-210ENST00000511023 ATP10AO60312 1499 aa23.1■■□□□ 1.29
COL12A1-210ENST00000511023 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
COL12A1-210ENST00000511023 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
COL12A1-210ENST00000511023 MLH3Q9UHC1 1453 aa23.08■■□□□ 1.29
COL12A1-210ENST00000511023 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
COL12A1-210ENST00000511023 MADDQ8WXG6 1647 aa23.07■■□□□ 1.28
COL12A1-210ENST00000511023 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
COL12A1-210ENST00000511023 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
COL12A1-210ENST00000511023 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
COL12A1-210ENST00000511023 DIP2CQ9Y2E4 1556 aa23.06■■□□□ 1.28
COL12A1-210ENST00000511023 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
COL12A1-210ENST00000511023 MAP3K1Q13233 1512 aa23.05■■□□□ 1.28
COL12A1-210ENST00000511023 KIAA1107Q9UPP5 1409 aa23.05■■□□□ 1.28
COL12A1-210ENST00000511023 ZNF644Q9H582 1327 aaPredicted RBP23.05■■□□□ 1.28
COL12A1-210ENST00000511023 ABCA6Q8N139 1617 aa23.04■■□□□ 1.28
COL12A1-210ENST00000511023 PTPRMP28827 1452 aa23.04■■□□□ 1.28
COL12A1-210ENST00000511023 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
COL12A1-210ENST00000511023 PLEKHH2Q8IVE3 1493 aa23.03■■□□□ 1.28
COL12A1-210ENST00000511023 KIDINS220Q9ULH0 1771 aa23.02■■□□□ 1.28
COL12A1-210ENST00000511023 MYT1LQ9UL68 1186 aa23.01■■□□□ 1.27
COL12A1-210ENST00000511023 REREQ9P2R6 1566 aa22.99■■□□□ 1.27
COL12A1-210ENST00000511023 MLECQ14165 292 aa22.99■■□□□ 1.27
COL12A1-210ENST00000511023 RIMS1Q86UR5 1692 aaKnown RBP22.98■■□□□ 1.27
COL12A1-210ENST00000511023 MBD5Q9P267 1494 aa22.98■■□□□ 1.27
COL12A1-210ENST00000511023 SPAG9O60271 1321 aaKnown RBP22.96■■□□□ 1.27
COL12A1-210ENST00000511023 INO80Q9ULG1 1556 aaPredicted RBP22.94■■□□□ 1.26
COL12A1-210ENST00000511023 ATP7AQ04656 1500 aa22.92■■□□□ 1.26
COL12A1-210ENST00000511023 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
COL12A1-210ENST00000511023 AGLP35573 1532 aa22.92■■□□□ 1.26
COL12A1-210ENST00000511023 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
COL12A1-210ENST00000511023 APLP2Q06481 763 aa22.86■■□□□ 1.25
COL12A1-210ENST00000511023 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
COL12A1-210ENST00000511023 CCDC141Q6ZP82 1450 aa22.85■■□□□ 1.25
COL12A1-210ENST00000511023 PLXNC1O60486 1568 aa22.84■■□□□ 1.25
COL12A1-210ENST00000511023 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
COL12A1-210ENST00000511023 RTEL1-TNFRSF6BF6WH68 1400 aa22.83■■□□□ 1.25
COL12A1-210ENST00000511023 A2MP01023 1474 aa22.83■■□□□ 1.25
COL12A1-210ENST00000511023 ARHGEF5Q12774 1597 aa22.83■■□□□ 1.25
COL12A1-210ENST00000511023 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
COL12A1-210ENST00000511023 ADGBQ8N7X0 1667 aa22.79■■□□□ 1.24
COL12A1-210ENST00000511023 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
COL12A1-210ENST00000511023 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
COL12A1-210ENST00000511023 LMTK3Q96Q04 1460 aa22.77■■□□□ 1.24
COL12A1-210ENST00000511023 DHX29Q7Z478 1369 aaKnown RBP22.74■■□□□ 1.23
COL12A1-210ENST00000511023 C3P01024 1663 aa22.72■■□□□ 1.23
COL12A1-210ENST00000511023 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
COL12A1-210ENST00000511023 TSPY4P0CV99 314 aa22.71■■□□□ 1.23
COL12A1-210ENST00000511023 TSPY10P0CW01 314 aa22.71■■□□□ 1.23
COL12A1-210ENST00000511023 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
COL12A1-210ENST00000511023 MAST1Q9Y2H9 1570 aa22.71■■□□□ 1.23
COL12A1-210ENST00000511023 CNTLNQ9NXG0 1405 aa22.7■■□□□ 1.22
COL12A1-210ENST00000511023 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
COL12A1-210ENST00000511023 GGT6Q6P531 493 aa22.68■■□□□ 1.22
COL12A1-210ENST00000511023 TCOF1Q13428 1488 aaKnown RBP22.67■■□□□ 1.22
COL12A1-210ENST00000511023 MROH2AA6NES4 1674 aa22.66■■□□□ 1.22
COL12A1-210ENST00000511023 HSPA2P54652 639 aa22.66■■□□□ 1.22
COL12A1-210ENST00000511023 ABCC5O15440 1437 aa22.65■■□□□ 1.22
COL12A1-210ENST00000511023 CLTCQ00610 1675 aaKnown RBP22.65■■□□□ 1.22
COL12A1-210ENST00000511023 PREX1Q8TCU6 1659 aa22.65■■□□□ 1.22
COL12A1-210ENST00000511023 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
COL12A1-210ENST00000511023 KIF3BO15066 747 aa22.63■■□□□ 1.21
COL12A1-210ENST00000511023 CROCC2H7BZ55 1655 aa22.62■■□□□ 1.21
COL12A1-210ENST00000511023 DNMT1P26358 1616 aaKnown RBP22.61■■□□□ 1.21
COL12A1-210ENST00000511023 DAPK1P53355 1430 aa22.61■■□□□ 1.21
COL12A1-210ENST00000511023 PPP6R1Q9UPN7 881 aa22.61■■□□□ 1.21
COL12A1-210ENST00000511023 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
COL12A1-210ENST00000511023 SETD1BQ9UPS6 1966 aaKnown RBP22.59■■□□□ 1.21
COL12A1-210ENST00000511023 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
COL12A1-210ENST00000511023 NPATQ14207 1427 aa22.57■■□□□ 1.2
COL12A1-210ENST00000511023 PTPRKQ15262 1439 aa22.55■■□□□ 1.2
COL12A1-210ENST00000511023 RNF17Q9BXT8 1623 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms