RNA–Protein interactions for RNA: ENST00000511016.1

ATR-205, Transcript of ATR serine/threonine kinase, humanhuman

TSL 4

Gene ATR, Length 681 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-205ENST00000511016 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
ATR-205ENST00000511016 EMP3P54852 163 aa12.31□□□□□ -0.44
ATR-205ENST00000511016 PPP1R37O75864 691 aa12.29□□□□□ -0.44
ATR-205ENST00000511016 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
ATR-205ENST00000511016 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
ATR-205ENST00000511016 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
ATR-205ENST00000511016 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
ATR-205ENST00000511016 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
ATR-205ENST00000511016 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
ATR-205ENST00000511016 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
ATR-205ENST00000511016 KIF3CO14782 793 aa12.24□□□□□ -0.45
ATR-205ENST00000511016 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
ATR-205ENST00000511016 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
ATR-205ENST00000511016 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
ATR-205ENST00000511016 ERBB3P21860 1342 aa12.14□□□□□ -0.47
ATR-205ENST00000511016 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
ATR-205ENST00000511016 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
ATR-205ENST00000511016 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
ATR-205ENST00000511016 SLC34A2O95436 690 aa12.1□□□□□ -0.47
ATR-205ENST00000511016 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
ATR-205ENST00000511016 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
ATR-205ENST00000511016 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
ATR-205ENST00000511016 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
ATR-205ENST00000511016 FOXK1P85037 733 aa12.08□□□□□ -0.48
ATR-205ENST00000511016 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
ATR-205ENST00000511016 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
ATR-205ENST00000511016 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
ATR-205ENST00000511016 DSG2Q14126 1118 aa12.03□□□□□ -0.48
ATR-205ENST00000511016 KHSRPQ92945 711 aaKnown RBP eCLIP12.03□□□□□ -0.48
ATR-205ENST00000511016 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
ATR-205ENST00000511016 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
ATR-205ENST00000511016 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
ATR-205ENST00000511016 NUDT7P0C024 238 aa12.01□□□□□ -0.49
ATR-205ENST00000511016 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
ATR-205ENST00000511016 KRTAP3-2Q9BYR7 98 aa12.01□□□□□ -0.49
ATR-205ENST00000511016 PDE4AP27815 886 aa11.99□□□□□ -0.49
ATR-205ENST00000511016 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
ATR-205ENST00000511016 PTCD2Q8WV60 388 aaKnown RBP11.98□□□□□ -0.49
ATR-205ENST00000511016 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
ATR-205ENST00000511016 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
ATR-205ENST00000511016 TBC1D12O60347 775 aa11.96□□□□□ -0.49
ATR-205ENST00000511016 SPNS2Q8IVW8 549 aa11.96□□□□□ -0.49
ATR-205ENST00000511016 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
ATR-205ENST00000511016 LHX6Q9UPM6 363 aa11.93□□□□□ -0.5
ATR-205ENST00000511016 DDX27Q96GQ7 796 aaKnown RBP11.92□□□□□ -0.5
ATR-205ENST00000511016 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
ATR-205ENST00000511016 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
ATR-205ENST00000511016 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
ATR-205ENST00000511016 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
ATR-205ENST00000511016 MFSD10Q14728 455 aa11.88□□□□□ -0.51
ATR-205ENST00000511016 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
ATR-205ENST00000511016 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
ATR-205ENST00000511016 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
ATR-205ENST00000511016 PBX2P40425 430 aa11.87□□□□□ -0.51
ATR-205ENST00000511016 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
ATR-205ENST00000511016 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
ATR-205ENST00000511016 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
ATR-205ENST00000511016 PTGER2P43116 358 aa11.79□□□□□ -0.52
ATR-205ENST00000511016 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
ATR-205ENST00000511016 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
ATR-205ENST00000511016 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
ATR-205ENST00000511016 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
ATR-205ENST00000511016 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
ATR-205ENST00000511016 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
ATR-205ENST00000511016 EVI5O60447 810 aa11.74□□□□□ -0.53
ATR-205ENST00000511016 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
ATR-205ENST00000511016 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
ATR-205ENST00000511016 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
ATR-205ENST00000511016 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
ATR-205ENST00000511016 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
ATR-205ENST00000511016 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
ATR-205ENST00000511016 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
ATR-205ENST00000511016 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
ATR-205ENST00000511016 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
ATR-205ENST00000511016 FOSBP53539 338 aa11.69□□□□□ -0.54
ATR-205ENST00000511016 TK2O00142 265 aa11.66□□□□□ -0.54
ATR-205ENST00000511016 PSEN2P49810 448 aa11.66□□□□□ -0.54
ATR-205ENST00000511016 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
ATR-205ENST00000511016 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
ATR-205ENST00000511016 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
ATR-205ENST00000511016 DPYSL4O14531 572 aa11.63□□□□□ -0.55
ATR-205ENST00000511016 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
ATR-205ENST00000511016 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
ATR-205ENST00000511016 WDR70Q9NW82 654 aa11.63□□□□□ -0.55
ATR-205ENST00000511016 PTPREP23469 700 aa11.62□□□□□ -0.55
ATR-205ENST00000511016 PHF14O94880 888 aa11.58□□□□□ -0.56
ATR-205ENST00000511016 E2F4Q16254 413 aa11.58□□□□□ -0.56
ATR-205ENST00000511016 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
ATR-205ENST00000511016 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
ATR-205ENST00000511016 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
ATR-205ENST00000511016 TYW1BQ6NUM6 668 aa11.56□□□□□ -0.56
ATR-205ENST00000511016 HRO43593 1189 aa11.55□□□□□ -0.56
ATR-205ENST00000511016 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
ATR-205ENST00000511016 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
ATR-205ENST00000511016 PDIA6Q15084 440 aa11.54□□□□□ -0.56
ATR-205ENST00000511016 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
ATR-205ENST00000511016 EPAS1Q99814 870 aa11.53□□□□□ -0.56
ATR-205ENST00000511016 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
ATR-205ENST00000511016 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
ATR-205ENST00000511016 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms