RNA–Protein interactions for RNA: ENST00000510566.1

UCHL1-208, Transcript of ubiquitin C-terminal hydrolase L1, human

TSL 2

Gene UCHL1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL1-208	ENST00000510566	ATP10B	O94823	1461 aa		13.89	□□□□□ -0.19
UCHL1-208	ENST00000510566	ARID3C	A6NKF2	412 aa		13.89	□□□□□ -0.19
UCHL1-208	ENST00000510566	HECW1	Q76N89	1606 aa		13.89	□□□□□ -0.19
UCHL1-208	ENST00000510566	PLEKHD1	A6NEE1	506 aa		13.88	□□□□□ -0.19
UCHL1-208	ENST00000510566	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.88	□□□□□ -0.19
UCHL1-208	ENST00000510566	CD109	Q6YHK3	1445 aa		13.88	□□□□□ -0.19
UCHL1-208	ENST00000510566	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.87	□□□□□ -0.19
UCHL1-208	ENST00000510566	PPRC1	Q5VV67	1664 aa	Known RBP	13.86	□□□□□ -0.19
UCHL1-208	ENST00000510566	NUP153	P49790	1475 aa	Known RBP	13.86	□□□□□ -0.19
UCHL1-208	ENST00000510566	CHRDL2	Q6WN34	429 aa		13.85	□□□□□ -0.19
UCHL1-208	ENST00000510566	ARHGAP35	Q9NRY4	1499 aa		13.85	□□□□□ -0.19
UCHL1-208	ENST00000510566	MAGI3	Q5TCQ9	1506 aa		13.84	□□□□□ -0.19
UCHL1-208	ENST00000510566	ABCA9	Q8IUA7	1624 aa		13.83	□□□□□ -0.2
UCHL1-208	ENST00000510566	PHLDB1	Q86UU1	1377 aa		13.82	□□□□□ -0.2
UCHL1-208	ENST00000510566	CFAP74	Q9C0B2	1584 aa		13.81	□□□□□ -0.2
UCHL1-208	ENST00000510566	CLIP1	P30622	1438 aa		13.8	□□□□□ -0.2
UCHL1-208	ENST00000510566	CCDC18	Q5T9S5	1454 aa		13.79	□□□□□ -0.2
UCHL1-208	ENST00000510566	AKT1S1	Q96B36	256 aa		13.77	□□□□□ -0.21
UCHL1-208	ENST00000510566	KIF14	Q15058	1648 aa		13.75	□□□□□ -0.21
UCHL1-208	ENST00000510566	CDK13	Q14004	1512 aa	Known RBP	13.75	□□□□□ -0.21
UCHL1-208	ENST00000510566	NEO1	Q92859	1461 aa		13.75	□□□□□ -0.21
UCHL1-208	ENST00000510566	FYCO1	Q9BQS8	1478 aa		13.74	□□□□□ -0.21
UCHL1-208	ENST00000510566	CASKIN1	Q8WXD9	1431 aa		13.73	□□□□□ -0.21
UCHL1-208	ENST00000510566	MYO5C	Q9NQX4	1742 aa		13.73	□□□□□ -0.21
UCHL1-208	ENST00000510566	PCF11	O94913	1555 aa	Known RBP	13.73	□□□□□ -0.21
UCHL1-208	ENST00000510566	ARAP3	Q8WWN8	1544 aa		13.72	□□□□□ -0.21
UCHL1-208	ENST00000510566	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
UCHL1-208	ENST00000510566	FANCA	O15360	1455 aa		13.7	□□□□□ -0.22
UCHL1-208	ENST00000510566	TRO	Q12816	1431 aa	Predicted RBP	13.7	□□□□□ -0.22
UCHL1-208	ENST00000510566	TTC37	Q6PGP7	1564 aa		13.68	□□□□□ -0.22
UCHL1-208	ENST00000510566	CEP162	Q5TB80	1403 aa		13.68	□□□□□ -0.22
UCHL1-208	ENST00000510566	LRRIQ1	Q96JM4	1722 aa		13.67	□□□□□ -0.22
UCHL1-208	ENST00000510566	DENND4B	O75064	1496 aa	Predicted RBP	13.66	□□□□□ -0.22
UCHL1-208	ENST00000510566	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.66	□□□□□ -0.22
UCHL1-208	ENST00000510566	AKNA	Q7Z591	1439 aa		13.65	□□□□□ -0.22
UCHL1-208	ENST00000510566	EFCAB2	Q5VUJ9	269 aa		13.65	□□□□□ -0.22
UCHL1-208	ENST00000510566	PLCH2	O75038	1416 aa		13.64	□□□□□ -0.23
UCHL1-208	ENST00000510566	ARHGAP5	Q13017	1502 aa		13.64	□□□□□ -0.23
UCHL1-208	ENST00000510566	ADGRL1	O94910	1474 aa		13.62	□□□□□ -0.23
UCHL1-208	ENST00000510566	MTUS2	Q5JR59	1369 aa		13.62	□□□□□ -0.23
UCHL1-208	ENST00000510566	RICTOR	Q6R327	1708 aa		13.61	□□□□□ -0.23
UCHL1-208	ENST00000510566	PREX2	Q70Z35	1606 aa		13.6	□□□□□ -0.23
UCHL1-208	ENST00000510566	RAPGEF3	O95398	923 aa		13.59	□□□□□ -0.23
UCHL1-208	ENST00000510566	MYT1L	Q9UL68	1186 aa		13.59	□□□□□ -0.23
UCHL1-208	ENST00000510566	REM2	Q8IYK8	340 aa	Predicted RBP	13.58	□□□□□ -0.24
UCHL1-208	ENST00000510566	MAGI2	Q86UL8	1455 aa		13.58	□□□□□ -0.24
UCHL1-208	ENST00000510566	EHBP1L1	Q8N3D4	1523 aa		13.58	□□□□□ -0.24
UCHL1-208	ENST00000510566	SCAPER	Q9BY12	1400 aa		13.57	□□□□□ -0.24
UCHL1-208	ENST00000510566	ZNF518A	Q6AHZ1	1483 aa		13.57	□□□□□ -0.24
UCHL1-208	ENST00000510566	CDC42BPB	Q9Y5S2	1711 aa		13.57	□□□□□ -0.24
UCHL1-208	ENST00000510566	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.57	□□□□□ -0.24
UCHL1-208	ENST00000510566	ITSN2	Q9NZM3	1697 aa		13.56	□□□□□ -0.24
UCHL1-208	ENST00000510566	POGZ	Q7Z3K3	1410 aa		13.56	□□□□□ -0.24
UCHL1-208	ENST00000510566	CDC42BPA	Q5VT25	1732 aa		13.56	□□□□□ -0.24
UCHL1-208	ENST00000510566	ZMYM4	Q5VZL5	1548 aa		13.56	□□□□□ -0.24
UCHL1-208	ENST00000510566	ARHGEF40	Q8TER5	1519 aa		13.56	□□□□□ -0.24
UCHL1-208	ENST00000510566	ZFYVE16	Q7Z3T8	1539 aa		13.55	□□□□□ -0.24
UCHL1-208	ENST00000510566	FRMPD1	Q5SYB0	1578 aa		13.55	□□□□□ -0.24
UCHL1-208	ENST00000510566	LOC105371045	A0A1W2PR82	267 aa		13.55	□□□□□ -0.24
UCHL1-208	ENST00000510566	CCNB3	Q8WWL7	1395 aa		13.55	□□□□□ -0.24
UCHL1-208	ENST00000510566	VPS8	Q8N3P4	1428 aa		13.55	□□□□□ -0.24
UCHL1-208	ENST00000510566	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.54	□□□□□ -0.24
UCHL1-208	ENST00000510566	KDM4F	A0A1W2PPD8	638 aa		13.53	□□□□□ -0.24
UCHL1-208	ENST00000510566	PLEKHH2	Q8IVE3	1493 aa		13.53	□□□□□ -0.24
UCHL1-208	ENST00000510566	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.51	□□□□□ -0.25
UCHL1-208	ENST00000510566	HECW2	Q9P2P5	1572 aa		13.5	□□□□□ -0.25
UCHL1-208	ENST00000510566	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.5	□□□□□ -0.25
UCHL1-208	ENST00000510566	TIAM1	Q13009	1591 aa		13.49	□□□□□ -0.25
UCHL1-208	ENST00000510566	ABCC1	P33527	1531 aa		13.49	□□□□□ -0.25
UCHL1-208	ENST00000510566	BCORL1	Q5H9F3	1711 aa		13.48	□□□□□ -0.25
UCHL1-208	ENST00000510566	MKRN4P	Q13434	485 aa	Predicted RBP	13.48	□□□□□ -0.25
UCHL1-208	ENST00000510566	KDM5C	P41229	1560 aa		13.48	□□□□□ -0.25
UCHL1-208	ENST00000510566	C9orf84	Q5VXU9	1444 aa		13.47	□□□□□ -0.25
UCHL1-208	ENST00000510566	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.47	□□□□□ -0.25
UCHL1-208	ENST00000510566	ATP10A	O60312	1499 aa		13.47	□□□□□ -0.25
UCHL1-208	ENST00000510566	MAP3K1	Q13233	1512 aa		13.46	□□□□□ -0.25
UCHL1-208	ENST00000510566	PIP4P2	Q8N4L2	257 aa		13.45	□□□□□ -0.26
UCHL1-208	ENST00000510566	ADAMTSL3	P82987	1691 aa		13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	MLH3	Q9UHC1	1453 aa		13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	SP7	Q8TDD2	431 aa	Predicted RBP	13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	ESF1	Q9H501	851 aa	Known RBP	13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	KIAA1107	Q9UPP5	1409 aa		13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	SAMD9L	Q8IVG5	1584 aa		13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	SYCP2	Q9BX26	1530 aa		13.44	□□□□□ -0.26
UCHL1-208	ENST00000510566	FER1L4	A9Z1Z3	1794 aa		13.43	□□□□□ -0.26
UCHL1-208	ENST00000510566	AFAP1	Q8N556	730 aa		13.43	□□□□□ -0.26
UCHL1-208	ENST00000510566	YEATS2	Q9ULM3	1422 aa		13.43	□□□□□ -0.26
UCHL1-208	ENST00000510566	NCOA2	Q15596	1464 aa		13.42	□□□□□ -0.26
UCHL1-208	ENST00000510566	PITPNM1	O00562	1244 aa		13.42	□□□□□ -0.26
UCHL1-208	ENST00000510566	LRRC9	Q6ZRR7	1453 aa		13.42	□□□□□ -0.26
UCHL1-208	ENST00000510566	SPAG9	O60271	1321 aa	Known RBP	13.41	□□□□□ -0.26
UCHL1-208	ENST00000510566	RIMS1	Q86UR5	1692 aa	Known RBP	13.41	□□□□□ -0.26
UCHL1-208	ENST00000510566	RSPH4A	Q5TD94	716 aa		13.41	□□□□□ -0.26
UCHL1-208	ENST00000510566	MADD	Q8WXG6	1647 aa		13.41	□□□□□ -0.26
UCHL1-208	ENST00000510566	RERE	Q9P2R6	1566 aa		13.41	□□□□□ -0.26
UCHL1-208	ENST00000510566	SPDYE2B	A6NHP3	402 aa		13.4	□□□□□ -0.26
UCHL1-208	ENST00000510566	SPDYE6	P0CI01	402 aa		13.4	□□□□□ -0.26
UCHL1-208	ENST00000510566	SPDYE2	Q495Y8	402 aa		13.4	□□□□□ -0.26
UCHL1-208	ENST00000510566	DIP2C	Q9Y2E4	1556 aa		13.4	□□□□□ -0.26
UCHL1-208	ENST00000510566	TRAPPC8	Q9Y2L5	1435 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms