RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 POGZQ7Z3K3 1410 aa37.07■■■■□ 3.52
SNF8-209ENST00000510558 CDC42BPBQ9Y5S2 1711 aa37.05■■■■□ 3.52
SNF8-209ENST00000510558 CEP162Q5TB80 1403 aa37.04■■■■□ 3.52
SNF8-209ENST00000510558 ZFYVE16Q7Z3T8 1539 aa37.03■■■■□ 3.52
SNF8-209ENST00000510558 PREX2Q70Z35 1606 aa37.03■■■■□ 3.52
SNF8-209ENST00000510558 ADAMTSL3P82987 1691 aa37.02■■■■□ 3.52
SNF8-209ENST00000510558 MAGI2Q86UL8 1455 aa37.01■■■■□ 3.52
SNF8-209ENST00000510558 BCORL1Q5H9F3 1711 aa37.01■■■■□ 3.51
SNF8-209ENST00000510558 YEATS2Q9ULM3 1422 aa36.99■■■■□ 3.51
SNF8-209ENST00000510558 ARID4BQ4LE39 1312 aaPredicted RBP36.98■■■■□ 3.51
SNF8-209ENST00000510558 CDC42BPAQ5VT25 1732 aa36.96■■■■□ 3.51
SNF8-209ENST00000510558 ZNF518AQ6AHZ1 1483 aa36.91■■■■□ 3.5
SNF8-209ENST00000510558 SIGLEC1Q9BZZ2 1709 aa36.9■■■■□ 3.5
SNF8-209ENST00000510558 MADDQ8WXG6 1647 aa36.88■■■■□ 3.5
SNF8-209ENST00000510558 KDM5CP41229 1560 aa36.88■■■■□ 3.49
SNF8-209ENST00000510558 ABCC1P33527 1531 aa36.86■■■■□ 3.49
SNF8-209ENST00000510558 PTPRMP28827 1452 aa36.86■■■■□ 3.49
SNF8-209ENST00000510558 LOC105371045A0A1W2PR82 267 aa36.85■■■■□ 3.49
SNF8-209ENST00000510558 HECW2Q9P2P5 1572 aa36.84■■■■□ 3.49
SNF8-209ENST00000510558 ITSN2Q9NZM3 1697 aa36.83■■■■□ 3.49
SNF8-209ENST00000510558 MTUS2Q5JR59 1369 aa36.82■■■■□ 3.49
SNF8-209ENST00000510558 AFAP1Q8N556 730 aa36.82■■■■□ 3.48
SNF8-209ENST00000510558 ATP10AO60312 1499 aa36.81■■■■□ 3.48
SNF8-209ENST00000510558 ARHGEF12Q9NZN5 1544 aa36.8■■■■□ 3.48
SNF8-209ENST00000510558 GPATCH8Q9UKJ3 1502 aaKnown RBP36.8■■■■□ 3.48
SNF8-209ENST00000510558 RIMS1Q86UR5 1692 aaKnown RBP36.78■■■■□ 3.48
SNF8-209ENST00000510558 C9orf84Q5VXU9 1444 aa36.77■■■■□ 3.48
SNF8-209ENST00000510558 TRAPPC8Q9Y2L5 1435 aa36.76■■■■□ 3.47
SNF8-209ENST00000510558 EHBP1L1Q8N3D4 1523 aa36.75■■■■□ 3.47
SNF8-209ENST00000510558 SAMD9LQ8IVG5 1584 aa36.75■■■■□ 3.47
SNF8-209ENST00000510558 DIP2CQ9Y2E4 1556 aa36.71■■■■□ 3.47
SNF8-209ENST00000510558 MLH3Q9UHC1 1453 aa36.71■■■■□ 3.47
SNF8-209ENST00000510558 CCNB3Q8WWL7 1395 aa36.71■■■■□ 3.47
SNF8-209ENST00000510558 MYT1LQ9UL68 1186 aa36.71■■■■□ 3.47
SNF8-209ENST00000510558 ZNF777Q9ULD5 760 aaPredicted RBP36.7■■■■□ 3.47
SNF8-209ENST00000510558 ABCA6Q8N139 1617 aa36.69■■■■□ 3.46
SNF8-209ENST00000510558 FER1L4A9Z1Z3 1794 aa36.68■■■■□ 3.46
SNF8-209ENST00000510558 MLECQ14165 292 aa36.67■■■■□ 3.46
SNF8-209ENST00000510558 SYCP2Q9BX26 1530 aa36.67■■■■□ 3.46
SNF8-209ENST00000510558 TIAM1Q13009 1591 aa36.66■■■■□ 3.46
SNF8-209ENST00000510558 CFDP1Q9UEE9 299 aaPredicted RBP36.65■■■■□ 3.46
SNF8-209ENST00000510558 VPS8Q8N3P4 1428 aa36.64■■■■□ 3.46
SNF8-209ENST00000510558 REREQ9P2R6 1566 aa36.64■■■■□ 3.46
SNF8-209ENST00000510558 KIDINS220Q9ULH0 1771 aa36.63■■■■□ 3.46
SNF8-209ENST00000510558 PLEKHH2Q8IVE3 1493 aa36.6■■■■□ 3.45
SNF8-209ENST00000510558 KIAA1107Q9UPP5 1409 aa36.58■■■■□ 3.45
SNF8-209ENST00000510558 SUPT6HQ7KZ85 1726 aaKnown RBP36.56■■■■□ 3.44
SNF8-209ENST00000510558 HNRNPMP52272 730 aaKnown RBP eCLIP36.56■■■■□ 3.44
SNF8-209ENST00000510558 NCOA2Q15596 1464 aa36.5■■■■□ 3.43
SNF8-209ENST00000510558 AGLP35573 1532 aa36.5■■■■□ 3.43
SNF8-209ENST00000510558 PLPPR3Q6T4P5 718 aa36.49■■■■□ 3.43
SNF8-209ENST00000510558 SPAG9O60271 1321 aaKnown RBP36.49■■■■□ 3.43
SNF8-209ENST00000510558 INO80Q9ULG1 1556 aaPredicted RBP36.47■■■■□ 3.43
SNF8-209ENST00000510558 ATP7AQ04656 1500 aa36.46■■■■□ 3.43
SNF8-209ENST00000510558 LMTK3Q96Q04 1460 aa36.45■■■■□ 3.43
SNF8-209ENST00000510558 ZNF644Q9H582 1327 aaPredicted RBP36.45■■■■□ 3.43
SNF8-209ENST00000510558 LRRC9Q6ZRR7 1453 aa36.43■■■■□ 3.42
SNF8-209ENST00000510558 MAP3K1Q13233 1512 aa36.4■■■■□ 3.42
SNF8-209ENST00000510558 MBD5Q9P267 1494 aa36.39■■■■□ 3.42
SNF8-209ENST00000510558 CAMSAP2Q08AD1 1489 aa36.34■■■■□ 3.41
SNF8-209ENST00000510558 PLXNC1O60486 1568 aa36.32■■■■□ 3.41
SNF8-209ENST00000510558 CEBPAP49715 358 aaPredicted RBP36.31■■■■□ 3.4
SNF8-209ENST00000510558 A2MP01023 1474 aa36.31■■■■□ 3.4
SNF8-209ENST00000510558 ADGBQ8N7X0 1667 aa36.3■■■■□ 3.4
SNF8-209ENST00000510558 KANK4Q5T7N3 995 aaPredicted RBP36.29■■■■□ 3.4
SNF8-209ENST00000510558 C3P01024 1663 aa36.29■■■■□ 3.4
SNF8-209ENST00000510558 PREX1Q8TCU6 1659 aa36.28■■■■□ 3.4
SNF8-209ENST00000510558 CCDC141Q6ZP82 1450 aa36.26■■■■□ 3.4
SNF8-209ENST00000510558 ESF1Q9H501 851 aaKnown RBP36.26■■■■□ 3.4
SNF8-209ENST00000510558 RTEL1-TNFRSF6BF6WH68 1400 aa36.25■■■■□ 3.39
SNF8-209ENST00000510558 CNTLNQ9NXG0 1405 aa36.23■■■■□ 3.39
SNF8-209ENST00000510558 HSPA2P54652 639 aa36.22■■■■□ 3.39
SNF8-209ENST00000510558 SETD1BQ9UPS6 1966 aaKnown RBP36.21■■■■□ 3.39
SNF8-209ENST00000510558 ARHGEF5Q12774 1597 aa36.2■■■■□ 3.39
SNF8-209ENST00000510558 RSPH4AQ5TD94 716 aa36.18■■■■□ 3.38
SNF8-209ENST00000510558 MROH2AA6NES4 1674 aa36.18■■■■□ 3.38
SNF8-209ENST00000510558 APLP2Q06481 763 aa36.15■■■■□ 3.38
SNF8-209ENST00000510558 MYOM3Q5VTT5 1437 aa36.15■■■■□ 3.38
SNF8-209ENST00000510558 CLTCQ00610 1675 aaKnown RBP36.12■■■■□ 3.37
SNF8-209ENST00000510558 UHRF1BP1Q6BDS2 1440 aa36.11■■■■□ 3.37
SNF8-209ENST00000510558 MIA2Q96PC5 1412 aa36.11■■■■□ 3.37
SNF8-209ENST00000510558 DHX29Q7Z478 1369 aaKnown RBP36.1■■■■□ 3.37
SNF8-209ENST00000510558 GGT6Q6P531 493 aa36.08■■■■□ 3.37
SNF8-209ENST00000510558 ZMYM3Q14202 1370 aa36.05■■■■□ 3.36
SNF8-209ENST00000510558 TSPY4P0CV99 314 aa36.05■■■■□ 3.36
SNF8-209ENST00000510558 TSPY10P0CW01 314 aa36.05■■■■□ 3.36
SNF8-209ENST00000510558 MAST1Q9Y2H9 1570 aa36.02■■■■□ 3.36
SNF8-209ENST00000510558 PPP6R1Q9UPN7 881 aa36■■■■□ 3.35
SNF8-209ENST00000510558 NPATQ14207 1427 aa36■■■■□ 3.35
SNF8-209ENST00000510558 ILDR1Q86SU0 546 aaPredicted RBP35.98■■■■□ 3.35
SNF8-209ENST00000510558 KIF3BO15066 747 aa35.96■■■■□ 3.35
SNF8-209ENST00000510558 PTPN23Q9H3S7 1636 aa35.95■■■■□ 3.35
SNF8-209ENST00000510558 STRCQ7RTU9 1775 aa35.94■■■■□ 3.34
SNF8-209ENST00000510558 PTPRKQ15262 1439 aa35.9■■■■□ 3.34
SNF8-209ENST00000510558 FAM135AQ9P2D6 1515 aa35.88■■■■□ 3.33
SNF8-209ENST00000510558 CROCC2H7BZ55 1655 aa35.88■■■■□ 3.33
SNF8-209ENST00000510558 FGD6Q6ZV73 1430 aa35.88■■■■□ 3.33
SNF8-209ENST00000510558 KDM5DQ9BY66 1539 aa35.87■■■■□ 3.33
SNF8-209ENST00000510558 MYO3AQ8NEV4 1616 aa35.86■■■■□ 3.33
SNF8-209ENST00000510558 TCOF1Q13428 1488 aaKnown RBP35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms