RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 CASKIN1Q8WXD9 1431 aa12.44□□□□□ -0.42
PROM1-210ENST00000510224 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
PROM1-210ENST00000510224 PLCH2O75038 1416 aa12.43□□□□□ -0.42
PROM1-210ENST00000510224 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
PROM1-210ENST00000510224 KIF14Q15058 1648 aa12.41□□□□□ -0.42
PROM1-210ENST00000510224 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
PROM1-210ENST00000510224 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
PROM1-210ENST00000510224 CEBPAP49715 358 aaPredicted RBP12.39□□□□□ -0.43
PROM1-210ENST00000510224 CCDC18Q5T9S5 1454 aa12.39□□□□□ -0.43
PROM1-210ENST00000510224 HSPA2P54652 639 aa12.38□□□□□ -0.43
PROM1-210ENST00000510224 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
PROM1-210ENST00000510224 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
PROM1-210ENST00000510224 POGZQ7Z3K3 1410 aa12.36□□□□□ -0.43
PROM1-210ENST00000510224 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
PROM1-210ENST00000510224 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
PROM1-210ENST00000510224 GGT6Q6P531 493 aa12.34□□□□□ -0.43
PROM1-210ENST00000510224 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
PROM1-210ENST00000510224 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
PROM1-210ENST00000510224 TRAPPC8Q9Y2L5 1435 aa12.33□□□□□ -0.44
PROM1-210ENST00000510224 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.44
PROM1-210ENST00000510224 CFAP74Q9C0B2 1584 aa12.32□□□□□ -0.44
PROM1-210ENST00000510224 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
PROM1-210ENST00000510224 PTPRMP28827 1452 aa12.31□□□□□ -0.44
PROM1-210ENST00000510224 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
PROM1-210ENST00000510224 FRMPD1Q5SYB0 1578 aa12.31□□□□□ -0.44
PROM1-210ENST00000510224 ATP10AO60312 1499 aa12.29□□□□□ -0.44
PROM1-210ENST00000510224 RICTORQ6R327 1708 aa12.29□□□□□ -0.44
PROM1-210ENST00000510224 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
PROM1-210ENST00000510224 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
PROM1-210ENST00000510224 ARHGEF40Q8TER5 1519 aa12.28□□□□□ -0.44
PROM1-210ENST00000510224 TSPY4P0CV99 314 aa12.27□□□□□ -0.44
PROM1-210ENST00000510224 TSPY10P0CW01 314 aa12.27□□□□□ -0.44
PROM1-210ENST00000510224 HECW2Q9P2P5 1572 aa12.27□□□□□ -0.44
PROM1-210ENST00000510224 ARHGEF12Q9NZN5 1544 aa12.26□□□□□ -0.45
PROM1-210ENST00000510224 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
PROM1-210ENST00000510224 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
PROM1-210ENST00000510224 SYCP2Q9BX26 1530 aa12.25□□□□□ -0.45
PROM1-210ENST00000510224 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
PROM1-210ENST00000510224 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
PROM1-210ENST00000510224 KIF3BO15066 747 aa12.25□□□□□ -0.45
PROM1-210ENST00000510224 ITGAEP38570 1179 aa12.25□□□□□ -0.45
PROM1-210ENST00000510224 FAM50AQ14320 339 aaKnown RBP12.24□□□□□ -0.45
PROM1-210ENST00000510224 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
PROM1-210ENST00000510224 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
PROM1-210ENST00000510224 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
PROM1-210ENST00000510224 CDC42BPAQ5VT25 1732 aa12.22□□□□□ -0.45
PROM1-210ENST00000510224 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
PROM1-210ENST00000510224 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
PROM1-210ENST00000510224 ZMYM4Q5VZL5 1548 aa12.21□□□□□ -0.45
PROM1-210ENST00000510224 ABCC1P33527 1531 aa12.21□□□□□ -0.45
PROM1-210ENST00000510224 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
PROM1-210ENST00000510224 ADAMTSL3P82987 1691 aa12.2□□□□□ -0.46
PROM1-210ENST00000510224 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
PROM1-210ENST00000510224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
PROM1-210ENST00000510224 PLEKHH2Q8IVE3 1493 aa12.18□□□□□ -0.46
PROM1-210ENST00000510224 MLH3Q9UHC1 1453 aa12.18□□□□□ -0.46
PROM1-210ENST00000510224 LRRC9Q6ZRR7 1453 aa12.17□□□□□ -0.46
PROM1-210ENST00000510224 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
PROM1-210ENST00000510224 WASHC2CQ9Y4E1 1318 aa12.17□□□□□ -0.46
PROM1-210ENST00000510224 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
PROM1-210ENST00000510224 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
PROM1-210ENST00000510224 RRP7BPQ9NSQ0 103 aa12.16□□□□□ -0.46
PROM1-210ENST00000510224 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
PROM1-210ENST00000510224 ABCA6Q8N139 1617 aa12.15□□□□□ -0.46
PROM1-210ENST00000510224 KIAA1107Q9UPP5 1409 aa12.15□□□□□ -0.46
PROM1-210ENST00000510224 KDM5CP41229 1560 aa12.15□□□□□ -0.46
PROM1-210ENST00000510224 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.46
PROM1-210ENST00000510224 A2MP01023 1474 aa12.15□□□□□ -0.46
PROM1-210ENST00000510224 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
PROM1-210ENST00000510224 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
PROM1-210ENST00000510224 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
PROM1-210ENST00000510224 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
PROM1-210ENST00000510224 ZMYM3Q14202 1370 aa12.13□□□□□ -0.47
PROM1-210ENST00000510224 UHRF1BP1Q6BDS2 1440 aa12.13□□□□□ -0.47
PROM1-210ENST00000510224 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
PROM1-210ENST00000510224 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
PROM1-210ENST00000510224 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
PROM1-210ENST00000510224 CCDC141Q6ZP82 1450 aa12.11□□□□□ -0.47
PROM1-210ENST00000510224 SENP3Q9H4L4 574 aaPredicted RBP12.11□□□□□ -0.47
PROM1-210ENST00000510224 MBD5Q9P267 1494 aa12.1□□□□□ -0.47
PROM1-210ENST00000510224 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
PROM1-210ENST00000510224 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
PROM1-210ENST00000510224 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
PROM1-210ENST00000510224 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
PROM1-210ENST00000510224 SETD1BQ9UPS6 1966 aaKnown RBP12.07□□□□□ -0.48
PROM1-210ENST00000510224 CNTLNQ9NXG0 1405 aa12.07□□□□□ -0.48
PROM1-210ENST00000510224 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
PROM1-210ENST00000510224 AGLP35573 1532 aa12.05□□□□□ -0.48
PROM1-210ENST00000510224 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
PROM1-210ENST00000510224 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
PROM1-210ENST00000510224 KIF15Q9NS87 1388 aa12.03□□□□□ -0.48
PROM1-210ENST00000510224 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
PROM1-210ENST00000510224 CERKQ8TCT0 537 aa12.03□□□□□ -0.48
PROM1-210ENST00000510224 FBXO41Q8TF61 875 aa12.03□□□□□ -0.48
PROM1-210ENST00000510224 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.48
PROM1-210ENST00000510224 FGD6Q6ZV73 1430 aa12.02□□□□□ -0.49
PROM1-210ENST00000510224 BCANQ96GW7 911 aa12.02□□□□□ -0.49
PROM1-210ENST00000510224 MIA2Q96PC5 1412 aa12.02□□□□□ -0.49
PROM1-210ENST00000510224 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
PROM1-210ENST00000510224 CLTCQ00610 1675 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms